RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 CCDC47Q96A33 483 aaKnown RBP23.39■■□□□ 1.34
APAF1-210ENST00000551964 NFXL1Q6ZNB6 911 aa23.39■■□□□ 1.33
APAF1-210ENST00000551964 SYTL4Q96C24 671 aaPredicted RBP23.39■■□□□ 1.33
APAF1-210ENST00000551964 GRIN2BQ13224 1484 aa23.39■■□□□ 1.33
APAF1-210ENST00000551964 CFAP70Q5T0N1 1121 aa23.39■■□□□ 1.33
APAF1-210ENST00000551964 ARAP1Q96P48 1450 aa23.38■■□□□ 1.33
APAF1-210ENST00000551964 ANKRD20A12PQ8NF67 263 aa23.38■■□□□ 1.33
APAF1-210ENST00000551964 ERICH2A1L162 156 aa23.37■■□□□ 1.33
APAF1-210ENST00000551964 TRIM34Q9BYJ4 488 aa23.37■■□□□ 1.33
APAF1-210ENST00000551964 HFM1A2PYH4 1435 aa23.37■■□□□ 1.33
APAF1-210ENST00000551964 ZNF592Q92610 1267 aa23.36■■□□□ 1.33
APAF1-210ENST00000551964 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
APAF1-210ENST00000551964 SYNJ2O15056 1496 aa23.36■■□□□ 1.33
APAF1-210ENST00000551964 CCDC70Q6NSX1 233 aa23.36■■□□□ 1.33
APAF1-210ENST00000551964 CFTRP13569 1480 aa23.35■■□□□ 1.33
APAF1-210ENST00000551964 NINLQ9Y2I6 1382 aa23.35■■□□□ 1.33
APAF1-210ENST00000551964 SCAPERQ9BY12 1400 aa23.35■■□□□ 1.33
APAF1-210ENST00000551964 SASS6Q6UVJ0 657 aa23.35■■□□□ 1.33
APAF1-210ENST00000551964 AFAP1Q8N556 730 aa23.35■■□□□ 1.33
APAF1-210ENST00000551964 NLRP6P59044 892 aa23.34■■□□□ 1.33
APAF1-210ENST00000551964 AIMP1Q12904 312 aaKnown RBP23.34■■□□□ 1.33
APAF1-210ENST00000551964 MSH5O43196 834 aa23.34■■□□□ 1.33
APAF1-210ENST00000551964 IPO7O95373 1038 aaKnown RBP23.34■■□□□ 1.33
APAF1-210ENST00000551964 GNAI3P08754 354 aa23.33■■□□□ 1.33
APAF1-210ENST00000551964 PCMTD1Q96MG8 357 aaPredicted RBP23.33■■□□□ 1.33
APAF1-210ENST00000551964 NEUROD6Q96NK8 337 aa23.33■■□□□ 1.33
APAF1-210ENST00000551964 RAD21O60216 631 aa23.33■■□□□ 1.33
APAF1-210ENST00000551964 ATF3P18847 181 aa23.33■■□□□ 1.33
APAF1-210ENST00000551964 GPS2Q13227 327 aa23.33■■□□□ 1.33
APAF1-210ENST00000551964 NLRP2Q9NX02 1062 aa23.33■■□□□ 1.33
APAF1-210ENST00000551964 CCDC30Q5VVM6 783 aa23.33■■□□□ 1.32
APAF1-210ENST00000551964 CCDC73Q6ZRK6 1079 aa23.33■■□□□ 1.32
APAF1-210ENST00000551964 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.32
APAF1-210ENST00000551964 DHX16O60231 1041 aaKnown RBP23.32■■□□□ 1.32
APAF1-210ENST00000551964 NFKBIBQ15653 356 aa23.32■■□□□ 1.32
APAF1-210ENST00000551964 NUTM2GQ5VZR2 741 aa23.32■■□□□ 1.32
APAF1-210ENST00000551964 RALYLQ86SE5 291 aaKnown RBP23.31■■□□□ 1.32
APAF1-210ENST00000551964 CNTROBQ8N137 903 aa23.31■■□□□ 1.32
APAF1-210ENST00000551964 EHBP1L1Q8N3D4 1523 aa23.31■■□□□ 1.32
APAF1-210ENST00000551964 SAFBQ15424 915 aaKnown RBP eCLIP23.31■■□□□ 1.32
APAF1-210ENST00000551964 EFCAB5A4FU69 1503 aa23.31■■□□□ 1.32
APAF1-210ENST00000551964 KIAA1107Q9UPP5 1409 aa23.31■■□□□ 1.32
APAF1-210ENST00000551964 PRKAR2BP31323 418 aa23.3■■□□□ 1.32
APAF1-210ENST00000551964 EXOSC9Q06265 439 aaKnown RBP23.3■■□□□ 1.32
APAF1-210ENST00000551964 PSMA5P28066 241 aa23.3■■□□□ 1.32
APAF1-210ENST00000551964 TCEAL9Q9UHQ7 104 aa23.3■■□□□ 1.32
APAF1-210ENST00000551964 WASHC4Q2M389 1173 aa23.29■■□□□ 1.32
APAF1-210ENST00000551964 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.29■■□□□ 1.32
APAF1-210ENST00000551964 NBPF1Q3BBV0 1214 aa23.29■■□□□ 1.32
APAF1-210ENST00000551964 PDE3AQ14432 1141 aa23.29■■□□□ 1.32
APAF1-210ENST00000551964 HOMER1Q86YM7 354 aa23.28■■□□□ 1.32
APAF1-210ENST00000551964 C9orf84Q5VXU9 1444 aa23.28■■□□□ 1.32
APAF1-210ENST00000551964 CLASRPQ8N2M8 674 aaKnown RBP23.27■■□□□ 1.32
APAF1-210ENST00000551964 FOSBP53539 338 aa23.27■■□□□ 1.32
APAF1-210ENST00000551964 PDZRN3Q9UPQ7 1066 aa23.27■■□□□ 1.32
APAF1-210ENST00000551964 CTDP1Q9Y5B0 961 aaPredicted RBP23.27■■□□□ 1.32
APAF1-210ENST00000551964 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.26■■□□□ 1.31
APAF1-210ENST00000551964 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.26■■□□□ 1.31
APAF1-210ENST00000551964 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
APAF1-210ENST00000551964 FSD1Q9BTV5 496 aa23.26■■□□□ 1.31
APAF1-210ENST00000551964 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
APAF1-210ENST00000551964 SURF6O75683 361 aaKnown RBP23.25■■□□□ 1.31
APAF1-210ENST00000551964 GCC1Q96CN9 775 aa23.25■■□□□ 1.31
APAF1-210ENST00000551964 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
APAF1-210ENST00000551964 GPRASP1Q5JY77 1395 aa23.25■■□□□ 1.31
APAF1-210ENST00000551964 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
APAF1-210ENST00000551964 PRM3Q9NNZ6 103 aa23.25■■□□□ 1.31
APAF1-210ENST00000551964 PLEKHH2Q8IVE3 1493 aa23.24■■□□□ 1.31
APAF1-210ENST00000551964 ABTB2Q8N961 1025 aa23.23■■□□□ 1.31
APAF1-210ENST00000551964 FBXW7Q969H0 707 aa23.23■■□□□ 1.31
APAF1-210ENST00000551964 MRE11P49959 708 aa23.23■■□□□ 1.31
APAF1-210ENST00000551964 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
APAF1-210ENST00000551964 NBPF8Q3BBV2 869 aa23.23■■□□□ 1.31
APAF1-210ENST00000551964 FAM43AQ8N2R8 423 aa23.23■■□□□ 1.31
APAF1-210ENST00000551964 NOB1Q9ULX3 412 aaKnown RBP23.22■■□□□ 1.31
APAF1-210ENST00000551964 RBM33Q96EV2 1170 aaKnown RBP23.22■■□□□ 1.31
APAF1-210ENST00000551964 MCM2P49736 904 aa23.21■■□□□ 1.31
APAF1-210ENST00000551964 HIP1O00291 1037 aa23.2■■□□□ 1.3
APAF1-210ENST00000551964 RABEP1Q15276 862 aa23.2■■□□□ 1.3
APAF1-210ENST00000551964 NAT10Q9H0A0 1025 aaKnown RBP23.2■■□□□ 1.3
APAF1-210ENST00000551964 GNAI2P04899 355 aa23.19■■□□□ 1.3
APAF1-210ENST00000551964 SLC12A5Q9H2X9 1139 aa23.19■■□□□ 1.3
APAF1-210ENST00000551964 NASPP49321 788 aaPredicted RBP23.19■■□□□ 1.3
APAF1-210ENST00000551964 ERC1Q8IUD2 1116 aa23.19■■□□□ 1.3
APAF1-210ENST00000551964 BRMS1Q9HCU9 246 aa23.19■■□□□ 1.3
APAF1-210ENST00000551964 IFT57Q9NWB7 429 aa23.19■■□□□ 1.3
APAF1-210ENST00000551964 TSR2Q969E8 191 aaKnown RBP23.18■■□□□ 1.3
APAF1-210ENST00000551964 CT47B1P0C2W7 299 aaPredicted RBP23.18■■□□□ 1.3
APAF1-210ENST00000551964 TXNDC2Q86VQ3 553 aa23.18■■□□□ 1.3
APAF1-210ENST00000551964 C1orf115Q9H7X2 142 aa23.18■■□□□ 1.3
APAF1-210ENST00000551964 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
APAF1-210ENST00000551964 BCAR3O75815 825 aa23.18■■□□□ 1.3
APAF1-210ENST00000551964 NEK4P51957 841 aa23.18■■□□□ 1.3
APAF1-210ENST00000551964 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
APAF1-210ENST00000551964 CCDC39Q9UFE4 941 aa23.18■■□□□ 1.3
APAF1-210ENST00000551964 LETM1O95202 739 aaPredicted RBP23.17■■□□□ 1.3
APAF1-210ENST00000551964 CCDC27Q2M243 656 aa23.17■■□□□ 1.3
APAF1-210ENST00000551964 SMG6Q86US8 1419 aaKnown RBP23.17■■□□□ 1.3
APAF1-210ENST00000551964 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
APAF1-210ENST00000551964 ERBINQ96RT1 1412 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms