RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 ANKRD36BQ8N2N9 1353 aa15.47■□□□□ 0.07
RAB5C-208ENST00000551338 SLC12A5Q9H2X9 1139 aa15.46■□□□□ 0.07
RAB5C-208ENST00000551338 SENP3-EIF4A1A0A087X0R7 540 aa15.45■□□□□ 0.06
RAB5C-208ENST00000551338 NINLQ9Y2I6 1382 aa15.45■□□□□ 0.06
RAB5C-208ENST00000551338 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAB5C-208ENST00000551338 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAB5C-208ENST00000551338 PRAM1Q96QH2 718 aa15.44■□□□□ 0.06
RAB5C-208ENST00000551338 CD163L1Q9NR16 1453 aa15.44■□□□□ 0.06
RAB5C-208ENST00000551338 RIMS1Q86UR5 1692 aaKnown RBP15.44■□□□□ 0.06
RAB5C-208ENST00000551338 ATAD2Q6PL18 1390 aa15.43■□□□□ 0.06
RAB5C-208ENST00000551338 TMEM2Q9UHN6 1383 aa15.43■□□□□ 0.06
RAB5C-208ENST00000551338 TECPR2O15040 1411 aa15.43■□□□□ 0.06
RAB5C-208ENST00000551338 AKAP12Q02952 1782 aa15.42■□□□□ 0.06
RAB5C-208ENST00000551338 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
RAB5C-208ENST00000551338 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
RAB5C-208ENST00000551338 ITSN1Q15811 1721 aa15.42■□□□□ 0.06
RAB5C-208ENST00000551338 SLIT1O75093 1534 aa15.42■□□□□ 0.06
RAB5C-208ENST00000551338 MINK1Q8N4C8 1332 aaPredicted RBP15.42■□□□□ 0.06
RAB5C-208ENST00000551338 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
RAB5C-208ENST00000551338 A0A1W2PP64 1363 aa15.41■□□□□ 0.06
RAB5C-208ENST00000551338 NSD2O96028 1365 aa15.41■□□□□ 0.06
RAB5C-208ENST00000551338 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
RAB5C-208ENST00000551338 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
RAB5C-208ENST00000551338 ADAMTS13Q76LX8 1427 aa15.41■□□□□ 0.06
RAB5C-208ENST00000551338 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
RAB5C-208ENST00000551338 METP08581 1390 aa15.4■□□□□ 0.06
RAB5C-208ENST00000551338 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
RAB5C-208ENST00000551338 POGKQ9P215 609 aa15.4■□□□□ 0.06
RAB5C-208ENST00000551338 ADGRB2O60241 1585 aa15.4■□□□□ 0.06
RAB5C-208ENST00000551338 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
RAB5C-208ENST00000551338 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
RAB5C-208ENST00000551338 ADAMTS8Q9UP79 889 aa15.39■□□□□ 0.05
RAB5C-208ENST00000551338 TOPAZ1Q8N9V7 1692 aa15.38■□□□□ 0.05
RAB5C-208ENST00000551338 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.38■□□□□ 0.05
RAB5C-208ENST00000551338 FAM135BQ49AJ0 1406 aa15.38■□□□□ 0.05
RAB5C-208ENST00000551338 MED14O60244 1454 aa15.38■□□□□ 0.05
RAB5C-208ENST00000551338 PLEKHG1Q9ULL1 1385 aa15.37■□□□□ 0.05
RAB5C-208ENST00000551338 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
RAB5C-208ENST00000551338 SRPK2P78362 688 aaKnown RBP15.37■□□□□ 0.05
RAB5C-208ENST00000551338 PDE3BQ13370 1112 aa15.37■□□□□ 0.05
RAB5C-208ENST00000551338 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.05
RAB5C-208ENST00000551338 ERICH6BQ5W0A0 696 aa15.37■□□□□ 0.05
RAB5C-208ENST00000551338 ATP7BP35670 1465 aa15.37■□□□□ 0.05
RAB5C-208ENST00000551338 ZNF142P52746 1687 aaPredicted RBP15.37■□□□□ 0.05
RAB5C-208ENST00000551338 ADAMTSL3P82987 1691 aa15.37■□□□□ 0.05
RAB5C-208ENST00000551338 CGNL1Q0VF96 1302 aa15.37■□□□□ 0.05
RAB5C-208ENST00000551338 DIP2AQ14689 1571 aa15.36■□□□□ 0.05
RAB5C-208ENST00000551338 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
RAB5C-208ENST00000551338 MORC1Q86VD1 984 aa15.35■□□□□ 0.05
RAB5C-208ENST00000551338 CDK19Q9BWU1 502 aa15.35■□□□□ 0.05
RAB5C-208ENST00000551338 SALL2Q9Y467 1007 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-208ENST00000551338 CDC42BPGQ6DT37 1551 aa15.35■□□□□ 0.05
RAB5C-208ENST00000551338 CEP170BQ9Y4F5 1589 aaPredicted RBP15.35■□□□□ 0.05
RAB5C-208ENST00000551338 WAPLQ7Z5K2 1190 aa15.34■□□□□ 0.05
RAB5C-208ENST00000551338 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
RAB5C-208ENST00000551338 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
RAB5C-208ENST00000551338 SIRT1Q96EB6 747 aa15.32■□□□□ 0.04
RAB5C-208ENST00000551338 COL3A1P02461 1466 aaPredicted RBP15.32■□□□□ 0.04
RAB5C-208ENST00000551338 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
RAB5C-208ENST00000551338 NRKQ7Z2Y5 1582 aa15.32■□□□□ 0.04
RAB5C-208ENST00000551338 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
RAB5C-208ENST00000551338 LTKP29376 864 aa15.31■□□□□ 0.04
RAB5C-208ENST00000551338 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
RAB5C-208ENST00000551338 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
RAB5C-208ENST00000551338 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
RAB5C-208ENST00000551338 TERF2IPQ9NYB0 399 aa15.3■□□□□ 0.04
RAB5C-208ENST00000551338 ROBO2Q9HCK4 1378 aa15.29■□□□□ 0.04
RAB5C-208ENST00000551338 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
RAB5C-208ENST00000551338 CPSF1Q10570 1443 aaKnown RBP15.28■□□□□ 0.04
RAB5C-208ENST00000551338 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
RAB5C-208ENST00000551338 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
RAB5C-208ENST00000551338 RGPD8O14715 1765 aaPredicted RBP15.28■□□□□ 0.04
RAB5C-208ENST00000551338 PPIP5K1Q6PFW1 1433 aa15.27■□□□□ 0.04
RAB5C-208ENST00000551338 WASLO00401 505 aaPredicted RBP15.27■□□□□ 0.04
RAB5C-208ENST00000551338 TNNT2P45379 298 aaPredicted RBP15.27■□□□□ 0.04
RAB5C-208ENST00000551338 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
RAB5C-208ENST00000551338 CABP1Q9NZU7 370 aa15.26■□□□□ 0.03
RAB5C-208ENST00000551338 CHD2O14647 1828 aaKnown RBP15.25■□□□□ 0.03
RAB5C-208ENST00000551338 FYB1O15117 783 aa15.25■□□□□ 0.03
RAB5C-208ENST00000551338 MTHFSP49914 203 aa15.25■□□□□ 0.03
RAB5C-208ENST00000551338 RRP1P56182 461 aaKnown RBP15.25■□□□□ 0.03
RAB5C-208ENST00000551338 GGNBP2Q9H3C7 697 aa15.25■□□□□ 0.03
RAB5C-208ENST00000551338 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
RAB5C-208ENST00000551338 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
RAB5C-208ENST00000551338 EDC4Q6P2E9 1401 aaKnown RBP15.25■□□□□ 0.03
RAB5C-208ENST00000551338 NALCNQ8IZF0 1738 aa15.24■□□□□ 0.03
RAB5C-208ENST00000551338 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
RAB5C-208ENST00000551338 SETD1BQ9UPS6 1966 aaKnown RBP15.24■□□□□ 0.03
RAB5C-208ENST00000551338 NKTRP30414 1462 aaKnown RBP15.23■□□□□ 0.03
RAB5C-208ENST00000551338 APAF1O14727 1248 aa15.23■□□□□ 0.03
RAB5C-208ENST00000551338 CFAP53Q96M91 514 aa15.23■□□□□ 0.03
RAB5C-208ENST00000551338 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
RAB5C-208ENST00000551338 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
RAB5C-208ENST00000551338 PRR36Q9H6K5 1346 aa15.22■□□□□ 0.03
RAB5C-208ENST00000551338 GOLGA2Q08379 1002 aa15.21■□□□□ 0.03
RAB5C-208ENST00000551338 DUSP27Q5VZP5 1158 aa15.21■□□□□ 0.03
RAB5C-208ENST00000551338 NGEFQ8N5V2 710 aa15.21■□□□□ 0.03
RAB5C-208ENST00000551338 NUDT16Q96DE0 195 aaKnown RBP15.21■□□□□ 0.03
RAB5C-208ENST00000551338 TSHZ2Q9NRE2 1034 aa15.21■□□□□ 0.03
RAB5C-208ENST00000551338 SLFN5Q08AF3 891 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms