RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
SMARCC2-209ENST00000550164 ESPNB1AK53 854 aa12.59□□□□□ -0.39
SMARCC2-209ENST00000550164 REC8O95072 547 aa12.59□□□□□ -0.39
SMARCC2-209ENST00000550164 TEX14Q8IWB6 1497 aa12.58□□□□□ -0.39
SMARCC2-209ENST00000550164 CDC45O75419 566 aa12.58□□□□□ -0.4
SMARCC2-209ENST00000550164 RNF214Q8ND24 703 aa12.58□□□□□ -0.4
SMARCC2-209ENST00000550164 GPATCH8Q9UKJ3 1502 aaKnown RBP12.58□□□□□ -0.4
SMARCC2-209ENST00000550164 PLEKHH1Q9ULM0 1364 aa12.58□□□□□ -0.4
SMARCC2-209ENST00000550164 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
SMARCC2-209ENST00000550164 MAGI1Q96QZ7 1491 aaPredicted RBP12.57□□□□□ -0.4
SMARCC2-209ENST00000550164 TESK2Q96S53 571 aa12.57□□□□□ -0.4
SMARCC2-209ENST00000550164 AMER1Q5JTC6 1135 aaPredicted RBP12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 SEC24BO95487 1268 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 SPATA31E1Q6ZUB1 1445 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 PHF14O94880 888 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 GNAI1P63096 354 aa12.56□□□□□ -0.4
SMARCC2-209ENST00000550164 CTTNBP2Q8WZ74 1663 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 CHD1LQ86WJ1 897 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 TBC1D32Q96NH3 1257 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 SSH1Q8WYL5 1049 aa12.55□□□□□ -0.4
SMARCC2-209ENST00000550164 PZPP20742 1482 aa12.54□□□□□ -0.4
SMARCC2-209ENST00000550164 IFT140Q96RY7 1462 aa12.54□□□□□ -0.4
SMARCC2-209ENST00000550164 COG3Q96JB2 828 aa12.54□□□□□ -0.4
SMARCC2-209ENST00000550164 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
SMARCC2-209ENST00000550164 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
SMARCC2-209ENST00000550164 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
SMARCC2-209ENST00000550164 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
SMARCC2-209ENST00000550164 TNNQ9UQP3 1299 aa12.53□□□□□ -0.4
SMARCC2-209ENST00000550164 PANK2Q9BZ23 570 aa12.53□□□□□ -0.4
SMARCC2-209ENST00000550164 NUP153P49790 1475 aaKnown RBP12.52□□□□□ -0.4
SMARCC2-209ENST00000550164 PRAG1Q86YV5 1406 aa12.52□□□□□ -0.4
SMARCC2-209ENST00000550164 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.4
SMARCC2-209ENST00000550164 GCC1Q96CN9 775 aa12.52□□□□□ -0.4
SMARCC2-209ENST00000550164 CCDC173Q0VFZ6 552 aa12.52□□□□□ -0.41
SMARCC2-209ENST00000550164 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
SMARCC2-209ENST00000550164 CT47B1P0C2W7 299 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 NEK4P51957 841 aa12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 RABEP1Q15276 862 aa12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 KDM2BQ8NHM5 1336 aa12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 TRIM27P14373 513 aa12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 LTV1Q96GA3 475 aaPredicted RBP12.51□□□□□ -0.41
SMARCC2-209ENST00000550164 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 CHMP3Q9Y3E7 222 aa12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 GOLGA6L6A8MZA4 724 aa12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 MPNDQ8N594 471 aa12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 RLBP1P12271 317 aa12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 TNPO1Q92973 898 aaKnown RBP12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 LAMC3Q9Y6N6 1575 aa12.5□□□□□ -0.41
SMARCC2-209ENST00000550164 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 AMPHP49418 695 aa12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 HDGFP51858 240 aaKnown RBP12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 TPM2P07951 284 aa12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 CSPP1Q1MSJ5 1256 aa12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 KDM6BO15054 1643 aa12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
SMARCC2-209ENST00000550164 GRIN2AQ12879 1464 aa12.48□□□□□ -0.41
SMARCC2-209ENST00000550164 NRDCO43847 1150 aa12.48□□□□□ -0.41
SMARCC2-209ENST00000550164 FKBP5Q13451 457 aaPredicted RBP12.48□□□□□ -0.41
SMARCC2-209ENST00000550164 PRAM1Q96QH2 718 aa12.47□□□□□ -0.41
SMARCC2-209ENST00000550164 PKNOX2Q96KN3 472 aa12.47□□□□□ -0.41
SMARCC2-209ENST00000550164 SSFA2P28290 1259 aa12.47□□□□□ -0.41
SMARCC2-209ENST00000550164 KIF14Q15058 1648 aa12.47□□□□□ -0.41
SMARCC2-209ENST00000550164 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
SMARCC2-209ENST00000550164 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.41
SMARCC2-209ENST00000550164 RRP9O43818 475 aaKnown RBP12.46□□□□□ -0.41
SMARCC2-209ENST00000550164 CABP1Q9NZU7 370 aa12.46□□□□□ -0.41
SMARCC2-209ENST00000550164 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.41
SMARCC2-209ENST00000550164 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
SMARCC2-209ENST00000550164 NGDNQ8NEJ9 315 aaKnown RBP12.46□□□□□ -0.42
SMARCC2-209ENST00000550164 WDR62O43379 1518 aa12.45□□□□□ -0.42
SMARCC2-209ENST00000550164 UHRF1BP1Q6BDS2 1440 aa12.45□□□□□ -0.42
SMARCC2-209ENST00000550164 CDK11BP21127 795 aaKnown RBP12.45□□□□□ -0.42
SMARCC2-209ENST00000550164 CCDC39Q9UFE4 941 aa12.45□□□□□ -0.42
SMARCC2-209ENST00000550164 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 VPS37CA5D8V6 355 aaPredicted RBP12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 ZSCAN30Q86W11 494 aa12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 TSPYL4Q9UJ04 414 aa12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 MBD3O95983 291 aa12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 DNMT1P26358 1616 aaKnown RBP12.44□□□□□ -0.42
SMARCC2-209ENST00000550164 EIF2S2P20042 333 aaKnown RBP12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 DIAPH3Q9NSV4 1193 aa12.43□□□□□ -0.42
SMARCC2-209ENST00000550164 HSP90B1P14625 803 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms