RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 NOS1P29475 1434 aa16.36■□□□□ 0.21
CALCOCO1-217ENST00000549935 KIDINS220Q9ULH0 1771 aa16.36■□□□□ 0.21
CALCOCO1-217ENST00000549935 NRXN1Q9ULB1 1477 aa16.35■□□□□ 0.21
CALCOCO1-217ENST00000549935 ASXL2Q76L83 1435 aa16.35■□□□□ 0.21
CALCOCO1-217ENST00000549935 CENPJQ9HC77 1338 aaPredicted RBP16.35■□□□□ 0.21
CALCOCO1-217ENST00000549935 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
CALCOCO1-217ENST00000549935 MYO3AQ8NEV4 1616 aa16.35■□□□□ 0.21
CALCOCO1-217ENST00000549935 SEC24BO95487 1268 aa16.34■□□□□ 0.21
CALCOCO1-217ENST00000549935 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
CALCOCO1-217ENST00000549935 POGKQ9P215 609 aa16.34■□□□□ 0.21
CALCOCO1-217ENST00000549935 TRAK1Q9UPV9 953 aa16.34■□□□□ 0.21
CALCOCO1-217ENST00000549935 SBNO2Q9Y2G9 1366 aa16.33■□□□□ 0.21
CALCOCO1-217ENST00000549935 TNNT2P45379 298 aaPredicted RBP16.33■□□□□ 0.21
CALCOCO1-217ENST00000549935 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
CALCOCO1-217ENST00000549935 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
CALCOCO1-217ENST00000549935 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
CALCOCO1-217ENST00000549935 CFAP65Q6ZU64 1925 aaKnown RBP16.32■□□□□ 0.2
CALCOCO1-217ENST00000549935 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
CALCOCO1-217ENST00000549935 LMTK2Q8IWU2 1503 aa16.31■□□□□ 0.2
CALCOCO1-217ENST00000549935 MORC1Q86VD1 984 aa16.31■□□□□ 0.2
CALCOCO1-217ENST00000549935 WWC1Q8IX03 1113 aa16.31■□□□□ 0.2
CALCOCO1-217ENST00000549935 UPF2Q9HAU5 1272 aaKnown RBP16.31■□□□□ 0.2
CALCOCO1-217ENST00000549935 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
CALCOCO1-217ENST00000549935 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
CALCOCO1-217ENST00000549935 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
CALCOCO1-217ENST00000549935 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
CALCOCO1-217ENST00000549935 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
CALCOCO1-217ENST00000549935 GGT6Q6P531 493 aa16.29■□□□□ 0.2
CALCOCO1-217ENST00000549935 PHF23Q9BUL5 403 aaPredicted RBP16.29■□□□□ 0.2
CALCOCO1-217ENST00000549935 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
CALCOCO1-217ENST00000549935 NPATQ14207 1427 aa16.29■□□□□ 0.2
CALCOCO1-217ENST00000549935 QRICH2Q9H0J4 1663 aa16.29■□□□□ 0.2
CALCOCO1-217ENST00000549935 EIF5BO60841 1220 aaKnown RBP16.28■□□□□ 0.2
CALCOCO1-217ENST00000549935 FSD2A1L4K1 749 aa16.28■□□□□ 0.2
CALCOCO1-217ENST00000549935 CANXP27824 592 aaKnown RBP16.28■□□□□ 0.2
CALCOCO1-217ENST00000549935 PANK1Q8TE04 598 aa16.28■□□□□ 0.2
CALCOCO1-217ENST00000549935 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
CALCOCO1-217ENST00000549935 PPLO60437 1756 aa16.27■□□□□ 0.2
CALCOCO1-217ENST00000549935 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
CALCOCO1-217ENST00000549935 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
CALCOCO1-217ENST00000549935 TBC1D2Q9BYX2 928 aa16.27■□□□□ 0.2
CALCOCO1-217ENST00000549935 C14orf93Q9H972 538 aaKnown RBP16.27■□□□□ 0.2
CALCOCO1-217ENST00000549935 ZC3H13Q5T200 1668 aaKnown RBP16.27■□□□□ 0.19
CALCOCO1-217ENST00000549935 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
CALCOCO1-217ENST00000549935 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
CALCOCO1-217ENST00000549935 IQSEC2Q5JU85 1478 aa16.26■□□□□ 0.19
CALCOCO1-217ENST00000549935 ADGRB1O14514 1584 aa16.26■□□□□ 0.19
CALCOCO1-217ENST00000549935 RRAGDQ9NQL2 400 aaPredicted RBP16.25■□□□□ 0.19
CALCOCO1-217ENST00000549935 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 RUNDC1Q96C34 613 aa16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 RWDD1Q9H446 243 aaPredicted RBP16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 PCDHB15Q9Y5E8 787 aa16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 FRMPD1Q5SYB0 1578 aa16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 NUTM2DQ5VT03 806 aaPredicted RBP16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
CALCOCO1-217ENST00000549935 PDZRN3Q9UPQ7 1066 aa16.23■□□□□ 0.19
CALCOCO1-217ENST00000549935 POGZQ7Z3K3 1410 aa16.23■□□□□ 0.19
CALCOCO1-217ENST00000549935 MCM4P33991 863 aa16.22■□□□□ 0.19
CALCOCO1-217ENST00000549935 MTHFSP49914 203 aa16.22■□□□□ 0.19
CALCOCO1-217ENST00000549935 GOLGA6L3A6NEY3 463 aa16.22■□□□□ 0.19
CALCOCO1-217ENST00000549935 XRCC6P12956 609 aaKnown RBP eCLIP16.21■□□□□ 0.19
CALCOCO1-217ENST00000549935 CD109Q6YHK3 1445 aa16.21■□□□□ 0.19
CALCOCO1-217ENST00000549935 NPM1P06748 294 aaKnown RBP eCLIP16.21■□□□□ 0.18
CALCOCO1-217ENST00000549935 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
CALCOCO1-217ENST00000549935 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
CALCOCO1-217ENST00000549935 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 RLBP1P12271 317 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 CLCN1P35523 988 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 CFAP53Q96M91 514 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 CHMP5Q9NZZ3 219 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 MLH3Q9UHC1 1453 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 BCL2L13Q9BXK5 485 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 ABCC3O15438 1527 aa16.19■□□□□ 0.18
CALCOCO1-217ENST00000549935 GLI2P10070 1586 aa16.18■□□□□ 0.18
CALCOCO1-217ENST00000549935 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
CALCOCO1-217ENST00000549935 EVC2Q86UK5 1308 aa16.18■□□□□ 0.18
CALCOCO1-217ENST00000549935 CFAP74Q9C0B2 1584 aa16.17■□□□□ 0.18
CALCOCO1-217ENST00000549935 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 MVPQ14764 893 aaKnown RBP16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 TULP4Q9NRJ4 1543 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 SIGLEC1Q9BZZ2 1709 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 MRE11P49959 708 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 ANKRD36BQ8N2N9 1353 aa16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 ARHGEF28Q8N1W1 1705 aaKnown RBP16.16■□□□□ 0.18
CALCOCO1-217ENST00000549935 U2AF1L5P0DN76 240 aaPredicted RBP16.15■□□□□ 0.18
CALCOCO1-217ENST00000549935 U2AF1Q01081 240 aaKnown RBP eCLIP16.15■□□□□ 0.182e-7■□□□□ 8.1
CALCOCO1-217ENST00000549935 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
CALCOCO1-217ENST00000549935 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
CALCOCO1-217ENST00000549935 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
CALCOCO1-217ENST00000549935 NCOA3Q9Y6Q9 1424 aa16.14■□□□□ 0.17
CALCOCO1-217ENST00000549935 RAPGEF3O95398 923 aa16.14■□□□□ 0.17
CALCOCO1-217ENST00000549935 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
CALCOCO1-217ENST00000549935 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
CALCOCO1-217ENST00000549935 TRAK2O60296 914 aa16.13■□□□□ 0.17
CALCOCO1-217ENST00000549935 NEXMIFQ5QGS0 1516 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms