RNA–Protein interactions for RNA: ENST00000549472.1

ERBB3-210, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-210ENST00000549472 NINLQ9Y2I6 1382 aa16.2■□□□□ 0.18
ERBB3-210ENST00000549472 MYBBP1AQ9BQG0 1328 aaKnown RBP16.19■□□□□ 0.18
ERBB3-210ENST00000549472 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
ERBB3-210ENST00000549472 POGKQ9P215 609 aa16.19■□□□□ 0.18
ERBB3-210ENST00000549472 LMTK3Q96Q04 1460 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
ERBB3-210ENST00000549472 HSPA2P54652 639 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 TBX22Q9Y458 520 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 USP32Q8NFA0 1604 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 NPHP4O75161 1426 aaPredicted RBP16.18■□□□□ 0.18
ERBB3-210ENST00000549472 NCKAP5LQ9HCH0 1330 aa16.18■□□□□ 0.18
ERBB3-210ENST00000549472 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
ERBB3-210ENST00000549472 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
ERBB3-210ENST00000549472 DMRT2Q9Y5R5 561 aa16.16■□□□□ 0.18
ERBB3-210ENST00000549472 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
ERBB3-210ENST00000549472 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
ERBB3-210ENST00000549472 NLRP13Q86W25 1043 aa16.14■□□□□ 0.17
ERBB3-210ENST00000549472 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
ERBB3-210ENST00000549472 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
ERBB3-210ENST00000549472 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
ERBB3-210ENST00000549472 SAFB2Q14151 953 aaKnown RBP eCLIP16.12■□□□□ 0.17
ERBB3-210ENST00000549472 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
ERBB3-210ENST00000549472 XRN1Q8IZH2 1706 aaKnown RBP16.11■□□□□ 0.17
ERBB3-210ENST00000549472 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
ERBB3-210ENST00000549472 PTCH1Q13635 1447 aa16.11■□□□□ 0.17
ERBB3-210ENST00000549472 SRPK2P78362 688 aaKnown RBP16.1■□□□□ 0.17
ERBB3-210ENST00000549472 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
ERBB3-210ENST00000549472 TMC1Q8TDI8 760 aa16.1■□□□□ 0.17
ERBB3-210ENST00000549472 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
ERBB3-210ENST00000549472 SLC12A5Q9H2X9 1139 aa16.1■□□□□ 0.17
ERBB3-210ENST00000549472 WAPLQ7Z5K2 1190 aa16.09■□□□□ 0.17
ERBB3-210ENST00000549472 CABP2Q9NPB3 220 aa16.09■□□□□ 0.17
ERBB3-210ENST00000549472 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
ERBB3-210ENST00000549472 NSD3Q9BZ95 1437 aa16.09■□□□□ 0.17
ERBB3-210ENST00000549472 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
ERBB3-210ENST00000549472 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
ERBB3-210ENST00000549472 AMOTL2Q9Y2J4 779 aa16.08■□□□□ 0.16
ERBB3-210ENST00000549472 ROBO2Q9HCK4 1378 aa16.08■□□□□ 0.16
ERBB3-210ENST00000549472 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
ERBB3-210ENST00000549472 NSD2O96028 1365 aa16.07■□□□□ 0.16
ERBB3-210ENST00000549472 ATP7BP35670 1465 aa16.07■□□□□ 0.16
ERBB3-210ENST00000549472 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.06■□□□□ 0.16
ERBB3-210ENST00000549472 INSRP06213 1382 aa16.06■□□□□ 0.16
ERBB3-210ENST00000549472 FAM9BQ8IZU0 186 aa16.06■□□□□ 0.16
ERBB3-210ENST00000549472 CD163L1Q9NR16 1453 aa16.05■□□□□ 0.16
ERBB3-210ENST00000549472 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
ERBB3-210ENST00000549472 TERF2IPQ9NYB0 399 aa16.05■□□□□ 0.16
ERBB3-210ENST00000549472 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
ERBB3-210ENST00000549472 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
ERBB3-210ENST00000549472 A0A1W2PP64 1363 aa16.04■□□□□ 0.16
ERBB3-210ENST00000549472 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
ERBB3-210ENST00000549472 KCNA6P17658 529 aa16.04■□□□□ 0.16
ERBB3-210ENST00000549472 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
ERBB3-210ENST00000549472 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
ERBB3-210ENST00000549472 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.16
ERBB3-210ENST00000549472 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
ERBB3-210ENST00000549472 STRCQ7RTU9 1775 aa16.02■□□□□ 0.15
ERBB3-210ENST00000549472 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
ERBB3-210ENST00000549472 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
ERBB3-210ENST00000549472 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
ERBB3-210ENST00000549472 KIF20BQ96Q89 1820 aa16■□□□□ 0.15
ERBB3-210ENST00000549472 AKAP12Q02952 1782 aa16■□□□□ 0.15
ERBB3-210ENST00000549472 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
ERBB3-210ENST00000549472 MON2Q7Z3U7 1717 aa15.99■□□□□ 0.15
ERBB3-210ENST00000549472 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
ERBB3-210ENST00000549472 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
ERBB3-210ENST00000549472 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
ERBB3-210ENST00000549472 CABP1Q9NZU7 370 aa15.98■□□□□ 0.15
ERBB3-210ENST00000549472 NUDT16Q96DE0 195 aaKnown RBP15.97■□□□□ 0.15
ERBB3-210ENST00000549472 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
ERBB3-210ENST00000549472 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
ERBB3-210ENST00000549472 NWD1Q149M9 1564 aa15.96■□□□□ 0.15
ERBB3-210ENST00000549472 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
ERBB3-210ENST00000549472 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
ERBB3-210ENST00000549472 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
ERBB3-210ENST00000549472 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
ERBB3-210ENST00000549472 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
ERBB3-210ENST00000549472 ANKARQ7Z5J8 1434 aa15.94■□□□□ 0.14
ERBB3-210ENST00000549472 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
ERBB3-210ENST00000549472 ZNF692Q9BU19 519 aaPredicted RBP15.93■□□□□ 0.14
ERBB3-210ENST00000549472 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
ERBB3-210ENST00000549472 NALCNQ8IZF0 1738 aa15.92■□□□□ 0.14
ERBB3-210ENST00000549472 PLEKHG3A1L390 1219 aa15.91■□□□□ 0.14
ERBB3-210ENST00000549472 FYB1O15117 783 aa15.91■□□□□ 0.14
ERBB3-210ENST00000549472 NCOA3Q9Y6Q9 1424 aa15.9■□□□□ 0.14
ERBB3-210ENST00000549472 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
ERBB3-210ENST00000549472 SHPRHQ149N8 1683 aa15.89■□□□□ 0.13
ERBB3-210ENST00000549472 ATF3P18847 181 aa15.89■□□□□ 0.13
ERBB3-210ENST00000549472 WDR43Q15061 677 aaKnown RBP eCLIP15.89■□□□□ 0.13
ERBB3-210ENST00000549472 GTF3C3Q9Y5Q9 886 aa15.89■□□□□ 0.13
ERBB3-210ENST00000549472 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
ERBB3-210ENST00000549472 RGPD8O14715 1765 aaPredicted RBP15.88■□□□□ 0.13
ERBB3-210ENST00000549472 ADGRL3Q9HAR2 1447 aa15.88■□□□□ 0.13
ERBB3-210ENST00000549472 C19orf44Q9H6X5 657 aa15.88■□□□□ 0.13
ERBB3-210ENST00000549472 MSH6P52701 1360 aa15.87■□□□□ 0.13
ERBB3-210ENST00000549472 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
ERBB3-210ENST00000549472 CFAP53Q96M91 514 aa15.86■□□□□ 0.13
ERBB3-210ENST00000549472 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms