RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 CERKQ8TCT0 537 aa24.53■■□□□ 1.52
LETMD1-216ENST00000548401 USP47Q96K76 1375 aa24.52■■□□□ 1.52
LETMD1-216ENST00000548401 FMN2Q9NZ56 1722 aa24.5■■□□□ 1.51
LETMD1-216ENST00000548401 MSH6P52701 1360 aa24.5■■□□□ 1.51
LETMD1-216ENST00000548401 CENPJQ9HC77 1338 aaPredicted RBP24.49■■□□□ 1.51
LETMD1-216ENST00000548401 TULP4Q9NRJ4 1543 aa24.48■■□□□ 1.51
LETMD1-216ENST00000548401 SBNO2Q9Y2G9 1366 aa24.48■■□□□ 1.51
LETMD1-216ENST00000548401 POGKQ9P215 609 aa24.47■■□□□ 1.51
LETMD1-216ENST00000548401 SAFB2Q14151 953 aaKnown RBP eCLIP24.46■■□□□ 1.51
LETMD1-216ENST00000548401 C19orf44Q9H6X5 657 aa24.45■■□□□ 1.5
LETMD1-216ENST00000548401 C14orf37Q86TY3 774 aa24.44■■□□□ 1.5
LETMD1-216ENST00000548401 MST1RQ04912 1400 aa24.44■■□□□ 1.5
LETMD1-216ENST00000548401 USP32Q8NFA0 1604 aa24.43■■□□□ 1.5
LETMD1-216ENST00000548401 MINK1Q8N4C8 1332 aaPredicted RBP24.42■■□□□ 1.5
LETMD1-216ENST00000548401 ZEB1P37275 1124 aaPredicted RBP24.42■■□□□ 1.5
LETMD1-216ENST00000548401 HIRIP3Q9BW71 556 aaPredicted RBP24.39■■□□□ 1.49
LETMD1-216ENST00000548401 TOPAZ1Q8N9V7 1692 aa24.39■■□□□ 1.49
LETMD1-216ENST00000548401 ST20-MTHFSA0A0A6YYL1 179 aa24.38■■□□□ 1.49
LETMD1-216ENST00000548401 CADPS2Q86UW7 1296 aa24.38■■□□□ 1.49
LETMD1-216ENST00000548401 TESK2Q96S53 571 aa24.38■■□□□ 1.49
LETMD1-216ENST00000548401 ATP7BP35670 1465 aa24.38■■□□□ 1.49
LETMD1-216ENST00000548401 ANKARQ7Z5J8 1434 aa24.36■■□□□ 1.49
LETMD1-216ENST00000548401 C1orf167Q5SNV9 1468 aa24.36■■□□□ 1.49
LETMD1-216ENST00000548401 RGPD8O14715 1765 aaPredicted RBP24.36■■□□□ 1.49
LETMD1-216ENST00000548401 ATF3P18847 181 aa24.35■■□□□ 1.49
LETMD1-216ENST00000548401 ROBO1Q9Y6N7 1651 aa24.34■■□□□ 1.49
LETMD1-216ENST00000548401 WASLO00401 505 aaPredicted RBP24.34■■□□□ 1.49
LETMD1-216ENST00000548401 EIF4G2P78344 907 aaKnown RBP eCLIP24.34■■□□□ 1.49
LETMD1-216ENST00000548401 ITSN1Q15811 1721 aa24.34■■□□□ 1.49
LETMD1-216ENST00000548401 HSPA5P11021 654 aaKnown RBP24.33■■□□□ 1.49
LETMD1-216ENST00000548401 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
LETMD1-216ENST00000548401 KIF1AQ12756 1690 aa24.3■■□□□ 1.48
LETMD1-216ENST00000548401 DISP3Q9P2K9 1392 aa24.3■■□□□ 1.48
LETMD1-216ENST00000548401 UBAP1LF5GYI3 381 aa24.3■■□□□ 1.48
LETMD1-216ENST00000548401 TOM1O60784 492 aa24.29■■□□□ 1.48
LETMD1-216ENST00000548401 NHSL1Q5SYE7 1610 aa24.28■■□□□ 1.48
LETMD1-216ENST00000548401 CDK19Q9BWU1 502 aa24.28■■□□□ 1.48
LETMD1-216ENST00000548401 SLAIN2Q9P270 581 aa24.28■■□□□ 1.48
LETMD1-216ENST00000548401 EVC2Q86UK5 1308 aa24.28■■□□□ 1.48
LETMD1-216ENST00000548401 NUTM2FA1L443 756 aa24.25■■□□□ 1.47
LETMD1-216ENST00000548401 AHDC1Q5TGY3 1603 aaPredicted RBP24.24■■□□□ 1.47
LETMD1-216ENST00000548401 MYOM1P52179 1685 aa24.24■■□□□ 1.47
LETMD1-216ENST00000548401 BRINP3Q76B58 766 aa24.23■■□□□ 1.47
LETMD1-216ENST00000548401 CABP2Q9NPB3 220 aa24.23■■□□□ 1.47
LETMD1-216ENST00000548401 ATAD2Q6PL18 1390 aa24.21■■□□□ 1.47
LETMD1-216ENST00000548401 SRPK2P78362 688 aaKnown RBP24.21■■□□□ 1.47
LETMD1-216ENST00000548401 SLC24A1O60721 1099 aa24.2■■□□□ 1.46
LETMD1-216ENST00000548401 TMF1P82094 1093 aa24.2■■□□□ 1.46
LETMD1-216ENST00000548401 NUDT16Q96DE0 195 aaKnown RBP24.2■■□□□ 1.46
LETMD1-216ENST00000548401 ORAI2Q96SN7 254 aa24.2■■□□□ 1.46
LETMD1-216ENST00000548401 PIP4K2BP78356 416 aa24.19■■□□□ 1.46
LETMD1-216ENST00000548401 PPIP5K1Q6PFW1 1433 aa24.18■■□□□ 1.46
LETMD1-216ENST00000548401 PUS7Q96PZ0 661 aaKnown RBP24.18■■□□□ 1.46
LETMD1-216ENST00000548401 COL16A1Q07092 1604 aaPredicted RBP24.17■■□□□ 1.46
LETMD1-216ENST00000548401 AKAP12Q02952 1782 aa24.17■■□□□ 1.46
LETMD1-216ENST00000548401 FBXO41Q8TF61 875 aa24.17■■□□□ 1.46
LETMD1-216ENST00000548401 PHLPP1O60346 1717 aa24.16■■□□□ 1.46
LETMD1-216ENST00000548401 PXDNQ92626 1479 aa24.16■■□□□ 1.46
LETMD1-216ENST00000548401 ESCO1Q5FWF5 840 aa24.16■■□□□ 1.46
LETMD1-216ENST00000548401 CCDC61Q9Y6R9 512 aa24.16■■□□□ 1.46
LETMD1-216ENST00000548401 POLR3AO14802 1390 aaPredicted RBP24.15■■□□□ 1.46
LETMD1-216ENST00000548401 SCAF1Q9H7N4 1312 aaKnown RBP24.14■■□□□ 1.46
LETMD1-216ENST00000548401 CD163L1Q9NR16 1453 aa24.14■■□□□ 1.46
LETMD1-216ENST00000548401 NRKQ7Z2Y5 1582 aa24.14■■□□□ 1.45
LETMD1-216ENST00000548401 TRPM3Q9HCF6 1732 aaPredicted RBP24.14■■□□□ 1.45
LETMD1-216ENST00000548401 PHF8Q9UPP1 1060 aa24.14■■□□□ 1.45
LETMD1-216ENST00000548401 MON2Q7Z3U7 1717 aa24.13■■□□□ 1.45
LETMD1-216ENST00000548401 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
LETMD1-216ENST00000548401 NINLQ9Y2I6 1382 aa24.12■■□□□ 1.45
LETMD1-216ENST00000548401 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
LETMD1-216ENST00000548401 CDCA8Q53HL2 280 aa24.1■■□□□ 1.45
LETMD1-216ENST00000548401 CPSF1Q10570 1443 aaKnown RBP24.1■■□□□ 1.45
LETMD1-216ENST00000548401 PMFBP1Q8TBY8 1022 aa24.09■■□□□ 1.45
LETMD1-216ENST00000548401 DDX17Q92841 729 aaKnown RBP24.09■■□□□ 1.45
LETMD1-216ENST00000548401 KIF7Q2M1P5 1343 aa24.09■■□□□ 1.45
LETMD1-216ENST00000548401 NPHP3Q7Z494 1330 aa24.09■■□□□ 1.45
LETMD1-216ENST00000548401 CABP1Q9NZU7 370 aa24.08■■□□□ 1.45
LETMD1-216ENST00000548401 ACEP12821 1306 aa24.07■■□□□ 1.44
LETMD1-216ENST00000548401 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
LETMD1-216ENST00000548401 CCDC7Q96M83 1385 aa24.06■■□□□ 1.44
LETMD1-216ENST00000548401 ALS2Q96Q42 1657 aa24.06■■□□□ 1.44
LETMD1-216ENST00000548401 FOXO3O43524 673 aa24.06■■□□□ 1.44
LETMD1-216ENST00000548401 USP6P35125 1406 aa24.06■■□□□ 1.44
LETMD1-216ENST00000548401 WASHC2AQ641Q2 1341 aa24.05■■□□□ 1.44
LETMD1-216ENST00000548401 A0A1W2PP64 1363 aa24.04■■□□□ 1.44
LETMD1-216ENST00000548401 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
LETMD1-216ENST00000548401 ANKRD36BQ8N2N9 1353 aa24.03■■□□□ 1.44
LETMD1-216ENST00000548401 SLC12A5Q9H2X9 1139 aa24.03■■□□□ 1.44
LETMD1-216ENST00000548401 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
LETMD1-216ENST00000548401 HSPA1LP34931 641 aa24.02■■□□□ 1.44
LETMD1-216ENST00000548401 NGDNQ8NEJ9 315 aaKnown RBP24.02■■□□□ 1.44
LETMD1-216ENST00000548401 XPCQ01831 940 aaPredicted RBP24.01■■□□□ 1.43
LETMD1-216ENST00000548401 SBNO1A3KN83 1393 aa24.01■■□□□ 1.43
LETMD1-216ENST00000548401 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
LETMD1-216ENST00000548401 COL22A1Q8NFW1 1626 aaPredicted RBP24■■□□□ 1.43
LETMD1-216ENST00000548401 TMC1Q8TDI8 760 aa24■■□□□ 1.43
LETMD1-216ENST00000548401 PIK3C2AO00443 1686 aa23.99■■□□□ 1.43
LETMD1-216ENST00000548401 KRT28Q7Z3Y7 464 aa23.98■■□□□ 1.43
LETMD1-216ENST00000548401 BRD4O60885 1362 aaPredicted RBP23.98■■□□□ 1.43
LETMD1-216ENST00000548401 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms