RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
CALCOCO1-208ENST00000547988 TOM1O60784 492 aa16.22■□□□□ 0.19
CALCOCO1-208ENST00000547988 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
CALCOCO1-208ENST00000547988 WAPLQ7Z5K2 1190 aa16.21■□□□□ 0.19
CALCOCO1-208ENST00000547988 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
CALCOCO1-208ENST00000547988 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.18
CALCOCO1-208ENST00000547988 UBAP1LF5GYI3 381 aa16.2■□□□□ 0.18
CALCOCO1-208ENST00000547988 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
CALCOCO1-208ENST00000547988 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
CALCOCO1-208ENST00000547988 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
CALCOCO1-208ENST00000547988 ATF3P18847 181 aa16.19■□□□□ 0.18
CALCOCO1-208ENST00000547988 FBXO41Q8TF61 875 aa16.19■□□□□ 0.18
CALCOCO1-208ENST00000547988 POGKQ9P215 609 aa16.19■□□□□ 0.18
CALCOCO1-208ENST00000547988 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
CALCOCO1-208ENST00000547988 MST1RQ04912 1400 aa16.17■□□□□ 0.18
CALCOCO1-208ENST00000547988 USP32Q8NFA0 1604 aa16.16■□□□□ 0.18
CALCOCO1-208ENST00000547988 NHSL1Q5SYE7 1610 aa16.15■□□□□ 0.18
CALCOCO1-208ENST00000547988 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
CALCOCO1-208ENST00000547988 KIF1AQ12756 1690 aa16.14■□□□□ 0.18
CALCOCO1-208ENST00000547988 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CALCOCO1-208ENST00000547988 SLAIN2Q9P270 581 aa16.13■□□□□ 0.17
CALCOCO1-208ENST00000547988 TOPAZ1Q8N9V7 1692 aa16.13■□□□□ 0.17
CALCOCO1-208ENST00000547988 TULP4Q9NRJ4 1543 aa16.13■□□□□ 0.17
CALCOCO1-208ENST00000547988 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
CALCOCO1-208ENST00000547988 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
CALCOCO1-208ENST00000547988 MINK1Q8N4C8 1332 aaPredicted RBP16.12■□□□□ 0.17
CALCOCO1-208ENST00000547988 SBNO2Q9Y2G9 1366 aa16.12■□□□□ 0.17
CALCOCO1-208ENST00000547988 ANKARQ7Z5J8 1434 aa16.11■□□□□ 0.17
CALCOCO1-208ENST00000547988 AHDC1Q5TGY3 1603 aaPredicted RBP16.1■□□□□ 0.17
CALCOCO1-208ENST00000547988 PIP4K2BP78356 416 aa16.1■□□□□ 0.17
CALCOCO1-208ENST00000547988 SCAF1Q9H7N4 1312 aaKnown RBP16.1■□□□□ 0.17
CALCOCO1-208ENST00000547988 USP47Q96K76 1375 aa16.1■□□□□ 0.17
CALCOCO1-208ENST00000547988 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
CALCOCO1-208ENST00000547988 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
CALCOCO1-208ENST00000547988 ATP7BP35670 1465 aa16.07■□□□□ 0.16
CALCOCO1-208ENST00000547988 COL16A1Q07092 1604 aaPredicted RBP16.06■□□□□ 0.16
CALCOCO1-208ENST00000547988 BRINP3Q76B58 766 aa16.05■□□□□ 0.16
CALCOCO1-208ENST00000547988 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
CALCOCO1-208ENST00000547988 ILDR1Q86SU0 546 aaPredicted RBP16.04■□□□□ 0.16
CALCOCO1-208ENST00000547988 AKAP12Q02952 1782 aa16.03■□□□□ 0.16
CALCOCO1-208ENST00000547988 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
CALCOCO1-208ENST00000547988 NUTM2FA1L443 756 aa16.03■□□□□ 0.16
CALCOCO1-208ENST00000547988 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
CALCOCO1-208ENST00000547988 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
CALCOCO1-208ENST00000547988 ESCO1Q5FWF5 840 aa16.02■□□□□ 0.16
CALCOCO1-208ENST00000547988 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
CALCOCO1-208ENST00000547988 PRR36Q9H6K5 1346 aa16.01■□□□□ 0.15
CALCOCO1-208ENST00000547988 ORAI2Q96SN7 254 aa16.01■□□□□ 0.15
CALCOCO1-208ENST00000547988 TRPM3Q9HCF6 1732 aaPredicted RBP16■□□□□ 0.15
CALCOCO1-208ENST00000547988 EIF4G2P78344 907 aaKnown RBP eCLIP16■□□□□ 0.15
CALCOCO1-208ENST00000547988 SRPK2P78362 688 aaKnown RBP16■□□□□ 0.15
CALCOCO1-208ENST00000547988 TESK2Q96S53 571 aa16■□□□□ 0.15
CALCOCO1-208ENST00000547988 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
CALCOCO1-208ENST00000547988 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
CALCOCO1-208ENST00000547988 PXDNQ92626 1479 aa15.98■□□□□ 0.15
CALCOCO1-208ENST00000547988 HSPA1LP34931 641 aa15.98■□□□□ 0.15
CALCOCO1-208ENST00000547988 MON2Q7Z3U7 1717 aa15.98■□□□□ 0.15
CALCOCO1-208ENST00000547988 PHF8Q9UPP1 1060 aa15.98■□□□□ 0.15
CALCOCO1-208ENST00000547988 ATAD2Q6PL18 1390 aa15.98■□□□□ 0.15
CALCOCO1-208ENST00000547988 PPIP5K1Q6PFW1 1433 aa15.97■□□□□ 0.15
CALCOCO1-208ENST00000547988 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
CALCOCO1-208ENST00000547988 CCDC61Q9Y6R9 512 aa15.97■□□□□ 0.15
CALCOCO1-208ENST00000547988 MYOM1P52179 1685 aa15.97■□□□□ 0.15
CALCOCO1-208ENST00000547988 ALS2Q96Q42 1657 aa15.96■□□□□ 0.15
CALCOCO1-208ENST00000547988 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
CALCOCO1-208ENST00000547988 PUS7Q96PZ0 661 aaKnown RBP15.96■□□□□ 0.15
CALCOCO1-208ENST00000547988 COL22A1Q8NFW1 1626 aaPredicted RBP15.95■□□□□ 0.14
CALCOCO1-208ENST00000547988 HSPA5P11021 654 aaKnown RBP15.95■□□□□ 0.14
CALCOCO1-208ENST00000547988 TMF1P82094 1093 aa15.95■□□□□ 0.14
CALCOCO1-208ENST00000547988 SOS2Q07890 1332 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-208ENST00000547988 FOXO3O43524 673 aa15.94■□□□□ 0.14
CALCOCO1-208ENST00000547988 POLR3AO14802 1390 aaPredicted RBP15.94■□□□□ 0.14
CALCOCO1-208ENST00000547988 DISP3Q9P2K9 1392 aa15.94■□□□□ 0.14
CALCOCO1-208ENST00000547988 NRKQ7Z2Y5 1582 aa15.93■□□□□ 0.14
CALCOCO1-208ENST00000547988 PLEKHG3A1L390 1219 aa15.93■□□□□ 0.14
CALCOCO1-208ENST00000547988 PMFBP1Q8TBY8 1022 aa15.93■□□□□ 0.14
CALCOCO1-208ENST00000547988 NINLQ9Y2I6 1382 aa15.92■□□□□ 0.14
CALCOCO1-208ENST00000547988 ABCA3Q99758 1704 aa15.92■□□□□ 0.14
CALCOCO1-208ENST00000547988 MARF1Q9Y4F3 1742 aaKnown RBP15.92■□□□□ 0.14
CALCOCO1-208ENST00000547988 CDCA8Q53HL2 280 aa15.92■□□□□ 0.14
CALCOCO1-208ENST00000547988 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
CALCOCO1-208ENST00000547988 JCADQ9P266 1359 aa15.91■□□□□ 0.14
CALCOCO1-208ENST00000547988 NGDNQ8NEJ9 315 aaKnown RBP15.91■□□□□ 0.14
CALCOCO1-208ENST00000547988 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
CALCOCO1-208ENST00000547988 SBNO1A3KN83 1393 aa15.9■□□□□ 0.14
CALCOCO1-208ENST00000547988 PSME1Q06323 249 aa15.9■□□□□ 0.14
CALCOCO1-208ENST00000547988 CRYBG1Q9Y4K1 1723 aa15.9■□□□□ 0.14
CALCOCO1-208ENST00000547988 ACEP12821 1306 aa15.9■□□□□ 0.14
CALCOCO1-208ENST00000547988 TNS3Q68CZ2 1445 aa15.89■□□□□ 0.13
CALCOCO1-208ENST00000547988 KRT28Q7Z3Y7 464 aa15.89■□□□□ 0.13
CALCOCO1-208ENST00000547988 CABP1Q9NZU7 370 aa15.89■□□□□ 0.13
CALCOCO1-208ENST00000547988 BRD4O60885 1362 aaPredicted RBP15.88■□□□□ 0.13
CALCOCO1-208ENST00000547988 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
CALCOCO1-208ENST00000547988 USP6P35125 1406 aa15.87■□□□□ 0.13
CALCOCO1-208ENST00000547988 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
CALCOCO1-208ENST00000547988 CD163L1Q9NR16 1453 aa15.87■□□□□ 0.13
CALCOCO1-208ENST00000547988 SPATA31A3Q5VYP0 1347 aa15.87■□□□□ 0.13
CALCOCO1-208ENST00000547988 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
CALCOCO1-208ENST00000547988 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
CALCOCO1-208ENST00000547988 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms