RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 GUCA2AQ02747 115 aa8.49□□□□□ -1.05
CBX5-203ENST00000547872 Q3C1V9 767 aa8.49□□□□□ -1.05
CBX5-203ENST00000547872 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
CBX5-203ENST00000547872 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
CBX5-203ENST00000547872 RIC3Q7Z5B4 369 aa8.49□□□□□ -1.05
CBX5-203ENST00000547872 SCUBE3Q8IX30 993 aa8.49□□□□□ -1.05
CBX5-203ENST00000547872 ZNF516Q92618 1163 aa8.48□□□□□ -1.05
CBX5-203ENST00000547872 POLR3EQ9NVU0 708 aa8.48□□□□□ -1.05
CBX5-203ENST00000547872 SPTLC1O15269 473 aa8.47□□□□□ -1.05
CBX5-203ENST00000547872 GJA5P36382 358 aa8.47□□□□□ -1.05
CBX5-203ENST00000547872 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
CBX5-203ENST00000547872 DCAF1Q9Y4B6 1507 aa8.47□□□□□ -1.05
CBX5-203ENST00000547872 TLL1O43897 1013 aa8.46□□□□□ -1.06
CBX5-203ENST00000547872 FMNL1O95466 1100 aaPredicted RBP8.46□□□□□ -1.06
CBX5-203ENST00000547872 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
CBX5-203ENST00000547872 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
CBX5-203ENST00000547872 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
CBX5-203ENST00000547872 THOC2Q8NI27 1593 aaKnown RBP8.45□□□□□ -1.06
CBX5-203ENST00000547872 C6orf229H3BNL8 230 aa8.45□□□□□ -1.06
CBX5-203ENST00000547872 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
CBX5-203ENST00000547872 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
CBX5-203ENST00000547872 SALL2Q9Y467 1007 aaPredicted RBP8.45□□□□□ -1.06
CBX5-203ENST00000547872 ADH1BP00325 375 aa8.44□□□□□ -1.06
CBX5-203ENST00000547872 RNF19BQ6ZMZ0 732 aa8.44□□□□□ -1.06
CBX5-203ENST00000547872 SPSB2Q99619 263 aa8.44□□□□□ -1.06
CBX5-203ENST00000547872 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
CBX5-203ENST00000547872 MTMR2Q13614 643 aa8.43□□□□□ -1.06
CBX5-203ENST00000547872 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
CBX5-203ENST00000547872 ZBTB3Q9H5J0 574 aa8.43□□□□□ -1.06
CBX5-203ENST00000547872 PCDHB15Q9Y5E8 787 aa8.43□□□□□ -1.06
CBX5-203ENST00000547872 NUTM2BA6NNL0 878 aaPredicted RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 NUTM2EB1AL46 878 aaPredicted RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
CBX5-203ENST00000547872 NUTM2DQ5VT03 806 aaPredicted RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 PRPF38BQ5VTL8 546 aaKnown RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 NUTM2AQ8IVF1 878 aaPredicted RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 NKX2-3Q8TAU0 364 aa8.42□□□□□ -1.06
CBX5-203ENST00000547872 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 THAP11Q96EK4 314 aa8.42□□□□□ -1.06
CBX5-203ENST00000547872 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
CBX5-203ENST00000547872 KIF21AQ7Z4S6 1674 aa8.41□□□□□ -1.06
CBX5-203ENST00000547872 IFFO2Q5TF58 517 aa8.41□□□□□ -1.06
CBX5-203ENST00000547872 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
CBX5-203ENST00000547872 SPDYE5A6NIY4 337 aa8.4□□□□□ -1.06
CBX5-203ENST00000547872 HRCP23327 699 aa8.4□□□□□ -1.06
CBX5-203ENST00000547872 TMEM132AQ24JP5 1023 aa8.4□□□□□ -1.06
CBX5-203ENST00000547872 PROCA1Q8NCQ7 364 aaPredicted RBP8.4□□□□□ -1.06
CBX5-203ENST00000547872 CABLES1Q8TDN4 633 aa8.4□□□□□ -1.06
CBX5-203ENST00000547872 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.06
CBX5-203ENST00000547872 GGCXP38435 758 aa8.39□□□□□ -1.07
CBX5-203ENST00000547872 QPCTQ16769 361 aa8.39□□□□□ -1.07
CBX5-203ENST00000547872 MSS51Q4VC12 460 aa8.39□□□□□ -1.07
CBX5-203ENST00000547872 LILRB3O75022 631 aa8.38□□□□□ -1.07
CBX5-203ENST00000547872 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
CBX5-203ENST00000547872 S1PR4O95977 384 aa8.37□□□□□ -1.07
CBX5-203ENST00000547872 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
CBX5-203ENST00000547872 TSC1Q92574 1164 aa8.37□□□□□ -1.07
CBX5-203ENST00000547872 FAM160A2Q8N612 972 aaPredicted RBP8.36□□□□□ -1.07
CBX5-203ENST00000547872 PRDM9Q9NQV7 894 aa8.36□□□□□ -1.07
CBX5-203ENST00000547872 BAZ1AQ9NRL2 1556 aaPredicted RBP8.35□□□□□ -1.07
CBX5-203ENST00000547872 RTL5Q5HYW3 569 aaPredicted RBP8.35□□□□□ -1.07
CBX5-203ENST00000547872 PPP1R18Q6NYC8 613 aa8.35□□□□□ -1.07
CBX5-203ENST00000547872 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
CBX5-203ENST00000547872 A0A0G2JS52 829 aa8.34□□□□□ -1.07
CBX5-203ENST00000547872 JUNDP17535 347 aa8.34□□□□□ -1.07
CBX5-203ENST00000547872 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.34□□□□□ -1.07
CBX5-203ENST00000547872 CFAP99D6REC4 459 aa8.33□□□□□ -1.08
CBX5-203ENST00000547872 PPP2R2DQ66LE6 453 aa8.33□□□□□ -1.08
CBX5-203ENST00000547872 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
CBX5-203ENST00000547872 RFC5P40937 340 aa8.32□□□□□ -1.08
CBX5-203ENST00000547872 MMP16P51512 607 aa8.32□□□□□ -1.08
CBX5-203ENST00000547872 DESI1Q6ICB0 168 aa8.32□□□□□ -1.08
CBX5-203ENST00000547872 NCAPD3P42695 1498 aa8.32□□□□□ -1.08
CBX5-203ENST00000547872 ATAD2BQ9ULI0 1458 aa8.32□□□□□ -1.08
CBX5-203ENST00000547872 RNF223E7ERA6 249 aa8.31□□□□□ -1.08
CBX5-203ENST00000547872 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
CBX5-203ENST00000547872 AP1G2O75843 785 aa8.3□□□□□ -1.08
CBX5-203ENST00000547872 FBXO31Q5XUX0 539 aaPredicted RBP8.3□□□□□ -1.08
CBX5-203ENST00000547872 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
CBX5-203ENST00000547872 FCF1Q9Y324 198 aaKnown RBP8.3□□□□□ -1.08
CBX5-203ENST00000547872 PTPRNQ16849 979 aa8.29□□□□□ -1.08
CBX5-203ENST00000547872 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
CBX5-203ENST00000547872 CCDC24Q8N4L8 307 aa8.29□□□□□ -1.08
CBX5-203ENST00000547872 NUDT12Q9BQG2 462 aa8.29□□□□□ -1.08
CBX5-203ENST00000547872 BAZ1BQ9UIG0 1483 aaKnown RBP8.29□□□□□ -1.08
CBX5-203ENST00000547872 HMGXB3Q12766 1538 aa8.29□□□□□ -1.08
CBX5-203ENST00000547872 SMARCA4P51532 1647 aa8.28□□□□□ -1.08
CBX5-203ENST00000547872 LAMC3Q9Y6N6 1575 aa8.27□□□□□ -1.09
CBX5-203ENST00000547872 CCNYL3P0C7X3 344 aa8.27□□□□□ -1.09
CBX5-203ENST00000547872 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
CBX5-203ENST00000547872 CTDSPL2Q05D32 466 aa8.26□□□□□ -1.09
CBX5-203ENST00000547872 RIMBP3CA6NJZ7 1639 aa8.25□□□□□ -1.09
CBX5-203ENST00000547872 RIMBP3BA6NNM3 1639 aa8.25□□□□□ -1.09
CBX5-203ENST00000547872 RIMBP3Q9UFD9 1639 aa8.25□□□□□ -1.09
CBX5-203ENST00000547872 ZBTB24O43167 697 aaPredicted RBP8.25□□□□□ -1.09
CBX5-203ENST00000547872 USP17L8P0C7I0 530 aa8.25□□□□□ -1.09
CBX5-203ENST00000547872 CTHP32929 405 aa8.25□□□□□ -1.09
CBX5-203ENST00000547872 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
CBX5-203ENST00000547872 KCNH2Q12809 1159 aa8.23□□□□□ -1.09
CBX5-203ENST00000547872 BANK1Q8NDB2 785 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms