RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 ARHGAP23Q9P227 1491 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 KIF7Q2M1P5 1343 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 PIK3C2BO00750 1634 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 ANP32CO43423 234 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 EID1Q9Y6B2 187 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 SLIT1O75093 1534 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
CCDC65-203ENST00000547861 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.6
CCDC65-203ENST00000547861 GPRASP1Q5JY77 1395 aa11.27□□□□□ -0.6
CCDC65-203ENST00000547861 ADGRB3O60242 1522 aa11.27□□□□□ -0.61
CCDC65-203ENST00000547861 SYNMO15061 1565 aa11.26□□□□□ -0.61
CCDC65-203ENST00000547861 CCER2I3L3R5 266 aa11.26□□□□□ -0.61
CCDC65-203ENST00000547861 IDI1Q13907 227 aa11.26□□□□□ -0.61
CCDC65-203ENST00000547861 MED1Q15648 1581 aaPredicted RBP11.25□□□□□ -0.61
CCDC65-203ENST00000547861 TMEM2Q9UHN6 1383 aa11.25□□□□□ -0.61
CCDC65-203ENST00000547861 RGL3Q3MIN7 710 aa11.25□□□□□ -0.61
CCDC65-203ENST00000547861 CARD11Q9BXL7 1154 aa11.25□□□□□ -0.61
CCDC65-203ENST00000547861 MYOM2P54296 1465 aa11.24□□□□□ -0.61
CCDC65-203ENST00000547861 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
CCDC65-203ENST00000547861 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
CCDC65-203ENST00000547861 XIRP1Q702N8 1843 aaKnown RBP11.22□□□□□ -0.61
CCDC65-203ENST00000547861 KDM5AP29375 1690 aaKnown RBP11.22□□□□□ -0.61
CCDC65-203ENST00000547861 NOS1P29475 1434 aa11.22□□□□□ -0.61
CCDC65-203ENST00000547861 LHX8Q68G74 356 aa11.21□□□□□ -0.61
CCDC65-203ENST00000547861 SLC26A8Q96RN1 970 aa11.21□□□□□ -0.61
CCDC65-203ENST00000547861 MYOM1P52179 1685 aa11.21□□□□□ -0.62
CCDC65-203ENST00000547861 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.62
CCDC65-203ENST00000547861 SLC52A1Q9NWF4 448 aa11.21□□□□□ -0.62
CCDC65-203ENST00000547861 KCNA6P17658 529 aa11.19□□□□□ -0.62
CCDC65-203ENST00000547861 NBPF1Q3BBV0 1214 aa11.19□□□□□ -0.62
CCDC65-203ENST00000547861 BCANQ96GW7 911 aa11.19□□□□□ -0.62
CCDC65-203ENST00000547861 GTF3C3Q9Y5Q9 886 aa11.19□□□□□ -0.62
CCDC65-203ENST00000547861 NRXN1Q9ULB1 1477 aa11.19□□□□□ -0.62
CCDC65-203ENST00000547861 TMEM94Q12767 1356 aa11.19□□□□□ -0.62
CCDC65-203ENST00000547861 ST20-MTHFSA0A0A6YYL1 179 aa11.18□□□□□ -0.62
CCDC65-203ENST00000547861 PROSER2Q86WR7 435 aaPredicted RBP11.18□□□□□ -0.62
CCDC65-203ENST00000547861 RBM33Q96EV2 1170 aaKnown RBP11.18□□□□□ -0.62
CCDC65-203ENST00000547861 SETBP1Q9Y6X0 1596 aa11.17□□□□□ -0.62
CCDC65-203ENST00000547861 QRICH2Q9H0J4 1663 aa11.16□□□□□ -0.62
CCDC65-203ENST00000547861 NEXMIFQ5QGS0 1516 aa11.16□□□□□ -0.62
CCDC65-203ENST00000547861 CLCN6P51797 869 aa11.15□□□□□ -0.62
CCDC65-203ENST00000547861 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
CCDC65-203ENST00000547861 TMEM131LA2VDJ0 1609 aa11.15□□□□□ -0.62
CCDC65-203ENST00000547861 CHGAP10645 457 aaKnown RBP11.15□□□□□ -0.63
CCDC65-203ENST00000547861 POLR3GLQ9BT43 218 aa11.15□□□□□ -0.63
CCDC65-203ENST00000547861 ARHGEF28Q8N1W1 1705 aaKnown RBP11.14□□□□□ -0.63
CCDC65-203ENST00000547861 ZFYVE9O95405 1425 aa11.14□□□□□ -0.63
CCDC65-203ENST00000547861 FAM135BQ49AJ0 1406 aa11.14□□□□□ -0.63
CCDC65-203ENST00000547861 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
CCDC65-203ENST00000547861 STAC3Q96MF2 364 aa11.14□□□□□ -0.63
CCDC65-203ENST00000547861 POTEIP0CG38 1075 aa11.13□□□□□ -0.63
CCDC65-203ENST00000547861 HDGFP51858 240 aaKnown RBP11.13□□□□□ -0.63
CCDC65-203ENST00000547861 PLEKHG1Q9ULL1 1385 aa11.13□□□□□ -0.63
CCDC65-203ENST00000547861 NKTRP30414 1462 aaKnown RBP11.13□□□□□ -0.63
CCDC65-203ENST00000547861 NWD1Q149M9 1564 aa11.13□□□□□ -0.63
CCDC65-203ENST00000547861 TESK2Q96S53 571 aa11.12□□□□□ -0.63
CCDC65-203ENST00000547861 ROBO1Q9Y6N7 1651 aa11.12□□□□□ -0.63
CCDC65-203ENST00000547861 PIK3C2GO75747 1445 aa11.12□□□□□ -0.63
CCDC65-203ENST00000547861 NUTM2DQ5VT03 806 aaPredicted RBP11.12□□□□□ -0.63
CCDC65-203ENST00000547861 CHD2O14647 1828 aaKnown RBP11.11□□□□□ -0.63
CCDC65-203ENST00000547861 ADGRB1O14514 1584 aa11.11□□□□□ -0.63
CCDC65-203ENST00000547861 MSH6P52701 1360 aa11.11□□□□□ -0.63
CCDC65-203ENST00000547861 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCDC65-203ENST00000547861 RGS17Q9UGC6 210 aaPredicted RBP11.1□□□□□ -0.63
CCDC65-203ENST00000547861 TBX22Q9Y458 520 aa11.1□□□□□ -0.63
CCDC65-203ENST00000547861 EIF3AQ14152 1382 aaKnown RBP11.1□□□□□ -0.63
CCDC65-203ENST00000547861 ADGRF5Q8IZF2 1346 aa11.1□□□□□ -0.63
CCDC65-203ENST00000547861 CCDC184Q52MB2 194 aa11.09□□□□□ -0.63
CCDC65-203ENST00000547861 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
CCDC65-203ENST00000547861 SETD1AO15047 1707 aaKnown RBP11.07□□□□□ -0.64
CCDC65-203ENST00000547861 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
CCDC65-203ENST00000547861 ADAMTS13Q76LX8 1427 aa11.07□□□□□ -0.64
CCDC65-203ENST00000547861 ASXL1Q8IXJ9 1541 aa11.07□□□□□ -0.64
CCDC65-203ENST00000547861 MRS2Q9HD23 443 aa11.06□□□□□ -0.64
CCDC65-203ENST00000547861 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
CCDC65-203ENST00000547861 TMF1P82094 1093 aa11.06□□□□□ -0.64
CCDC65-203ENST00000547861 ZNF579Q8NAF0 562 aaKnown RBP11.06□□□□□ -0.64
CCDC65-203ENST00000547861 CREBZFQ9NS37 354 aa11.06□□□□□ -0.64
CCDC65-203ENST00000547861 KTN1Q86UP2 1357 aaKnown RBP11.06□□□□□ -0.64
CCDC65-203ENST00000547861 CFAP70Q5T0N1 1121 aa11.05□□□□□ -0.64
CCDC65-203ENST00000547861 POTEAQ6S8J7 498 aa11.05□□□□□ -0.64
CCDC65-203ENST00000547861 RPGRIP1LQ68CZ1 1315 aa11.05□□□□□ -0.64
CCDC65-203ENST00000547861 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
CCDC65-203ENST00000547861 DIP2AQ14689 1571 aa11.04□□□□□ -0.64
CCDC65-203ENST00000547861 NCOA3Q9Y6Q9 1424 aa11.04□□□□□ -0.64
CCDC65-203ENST00000547861 AMOTL2Q9Y2J4 779 aa11.04□□□□□ -0.64
CCDC65-203ENST00000547861 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
CCDC65-203ENST00000547861 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.03□□□□□ -0.64
CCDC65-203ENST00000547861 ATF3P18847 181 aa11.03□□□□□ -0.64
CCDC65-203ENST00000547861 HNRNPUQ00839 825 aaKnown RBP eCLIP11.03□□□□□ -0.64
CCDC65-203ENST00000547861 C19orf44Q9H6X5 657 aa11.03□□□□□ -0.64
CCDC65-203ENST00000547861 JCADQ9P266 1359 aa11.03□□□□□ -0.64
CCDC65-203ENST00000547861 SBNO2Q9Y2G9 1366 aa11.03□□□□□ -0.64
CCDC65-203ENST00000547861 PTPRUQ92729 1446 aa11.02□□□□□ -0.64
CCDC65-203ENST00000547861 CNGB1Q14028 1251 aaPredicted RBP11.02□□□□□ -0.65
CCDC65-203ENST00000547861 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
CCDC65-203ENST00000547861 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
CCDC65-203ENST00000547861 MYBBP1AQ9BQG0 1328 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms