RNA–Protein interactions for RNA: ENST00000546442.5

FGD4-213, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 5 BASIC

Gene FGD4, Length 3,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-213ENST00000546442 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.51□□□□□ -1.37
FGD4-213ENST00000546442 CHIC2Q9UKJ5 165 aa6.51□□□□□ -1.37
FGD4-213ENST00000546442 ATP7BP35670 1465 aa6.51□□□□□ -1.37
FGD4-213ENST00000546442 PIK3C2AO00443 1686 aa6.51□□□□□ -1.37
FGD4-213ENST00000546442 YTHDC2Q9H6S0 1430 aaKnown RBP6.51□□□□□ -1.37
FGD4-213ENST00000546442 SLIT3O75094 1523 aa6.51□□□□□ -1.37
FGD4-213ENST00000546442 THSD7AQ9UPZ6 1657 aa6.51□□□□□ -1.37
FGD4-213ENST00000546442 LRP6O75581 1613 aa6.5□□□□□ -1.37
FGD4-213ENST00000546442 RGPD3A6NKT7 1758 aaPredicted RBP6.5□□□□□ -1.37
FGD4-213ENST00000546442 RGPD4Q7Z3J3 1758 aa6.5□□□□□ -1.37
FGD4-213ENST00000546442 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
FGD4-213ENST00000546442 C1orf167Q5SNV9 1468 aa6.49□□□□□ -1.37
FGD4-213ENST00000546442 SCAF1Q9H7N4 1312 aaKnown RBP6.49□□□□□ -1.37
FGD4-213ENST00000546442 CD163L1Q9NR16 1453 aa6.48□□□□□ -1.37
FGD4-213ENST00000546442 PEAK1Q9H792 1746 aa6.48□□□□□ -1.37
FGD4-213ENST00000546442 CDK12Q9NYV4 1490 aaPredicted RBP6.48□□□□□ -1.37
FGD4-213ENST00000546442 TMEM94Q12767 1356 aa6.48□□□□□ -1.37
FGD4-213ENST00000546442 COL24A1Q17RW2 1714 aa6.47□□□□□ -1.37
FGD4-213ENST00000546442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.47□□□□□ -1.37
FGD4-213ENST00000546442 SHANK3Q9BYB0 1731 aa6.46□□□□□ -1.37
FGD4-213ENST00000546442 ESF1Q9H501 851 aaKnown RBP6.46□□□□□ -1.37
FGD4-213ENST00000546442 ADGRF5Q8IZF2 1346 aa6.46□□□□□ -1.37
FGD4-213ENST00000546442 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.37
FGD4-213ENST00000546442 POLR3AO14802 1390 aaPredicted RBP6.46□□□□□ -1.37
FGD4-213ENST00000546442 FAM208AQ9UK61 1670 aaKnown RBP6.46□□□□□ -1.37
FGD4-213ENST00000546442 ILDR1Q86SU0 546 aaPredicted RBP6.46□□□□□ -1.38
FGD4-213ENST00000546442 COL14A1Q05707 1796 aaKnown RBP6.46□□□□□ -1.38
FGD4-213ENST00000546442 KIF20BQ96Q89 1820 aa6.45□□□□□ -1.38
FGD4-213ENST00000546442 PARP4Q9UKK3 1724 aaKnown RBP6.45□□□□□ -1.38
FGD4-213ENST00000546442 NFAT5O94916 1531 aa6.45□□□□□ -1.38
FGD4-213ENST00000546442 TXNDC2Q86VQ3 553 aa6.45□□□□□ -1.38
FGD4-213ENST00000546442 CICQ96RK0 1608 aaPredicted RBP6.44□□□□□ -1.38
FGD4-213ENST00000546442 TNS1Q9HBL0 1735 aaKnown RBP6.43□□□□□ -1.38
FGD4-213ENST00000546442 SOS2Q07890 1332 aaPredicted RBP6.43□□□□□ -1.38
FGD4-213ENST00000546442 CPSF1Q10570 1443 aaKnown RBP6.43□□□□□ -1.38
FGD4-213ENST00000546442 PLEKHH1Q9ULM0 1364 aa6.43□□□□□ -1.38
FGD4-213ENST00000546442 BRD4O60885 1362 aaPredicted RBP6.43□□□□□ -1.38
FGD4-213ENST00000546442 RGPD1P0DJD0 1748 aa6.42□□□□□ -1.38
FGD4-213ENST00000546442 GLI3P10071 1580 aa6.42□□□□□ -1.38
FGD4-213ENST00000546442 SLIT2O94813 1529 aa6.42□□□□□ -1.38
FGD4-213ENST00000546442 RREB1Q92766 1687 aa6.42□□□□□ -1.38
FGD4-213ENST00000546442 SBNO1A3KN83 1393 aa6.42□□□□□ -1.38
FGD4-213ENST00000546442 VGFO15240 615 aaPredicted RBP6.41□□□□□ -1.38
FGD4-213ENST00000546442 SLC4A1APQ9BWU0 796 aaKnown RBP6.41□□□□□ -1.38
FGD4-213ENST00000546442 EID1Q9Y6B2 187 aa6.41□□□□□ -1.38
FGD4-213ENST00000546442 ADAMTS7Q9UKP4 1686 aa6.41□□□□□ -1.38
FGD4-213ENST00000546442 HDGFP51858 240 aaKnown RBP6.41□□□□□ -1.38
FGD4-213ENST00000546442 NCAPD2Q15021 1401 aa6.4□□□□□ -1.38
FGD4-213ENST00000546442 BRWD3Q6RI45 1802 aa6.4□□□□□ -1.38
FGD4-213ENST00000546442 QSER1Q2KHR3 1735 aa6.4□□□□□ -1.38
FGD4-213ENST00000546442 PNPLA6Q8IY17 1366 aa6.4□□□□□ -1.38
FGD4-213ENST00000546442 LTN1O94822 1766 aa6.4□□□□□ -1.39
FGD4-213ENST00000546442 PUS7Q96PZ0 661 aaKnown RBP6.39□□□□□ -1.39
FGD4-213ENST00000546442 CHGAP10645 457 aaKnown RBP6.39□□□□□ -1.39
FGD4-213ENST00000546442 BCANQ96GW7 911 aa6.39□□□□□ -1.39
FGD4-213ENST00000546442 ZNF831Q5JPB2 1677 aa6.39□□□□□ -1.39
FGD4-213ENST00000546442 SBF2Q86WG5 1849 aa6.39□□□□□ -1.39
FGD4-213ENST00000546442 MSH6P52701 1360 aa6.39□□□□□ -1.39
FGD4-213ENST00000546442 LRRC37A3O60309 1634 aa6.39□□□□□ -1.39
FGD4-213ENST00000546442 ATRNO75882 1429 aa6.39□□□□□ -1.39
FGD4-213ENST00000546442 PKD1L3Q7Z443 1732 aa6.38□□□□□ -1.39
FGD4-213ENST00000546442 TRIM52Q96A61 297 aa6.38□□□□□ -1.39
FGD4-213ENST00000546442 C19orf44Q9H6X5 657 aa6.38□□□□□ -1.39
FGD4-213ENST00000546442 TIMELESSQ9UNS1 1208 aa6.38□□□□□ -1.39
FGD4-213ENST00000546442 AMOTL2Q9Y2J4 779 aa6.38□□□□□ -1.39
FGD4-213ENST00000546442 TNS3Q68CZ2 1445 aa6.37□□□□□ -1.39
FGD4-213ENST00000546442 RGPD5Q99666 1765 aa6.37□□□□□ -1.39
FGD4-213ENST00000546442 BRINP3Q76B58 766 aa6.37□□□□□ -1.39
FGD4-213ENST00000546442 BCL9LQ86UU0 1499 aa6.36□□□□□ -1.39
FGD4-213ENST00000546442 SMG6Q86US8 1419 aaKnown RBP6.36□□□□□ -1.39
FGD4-213ENST00000546442 EIF3AQ14152 1382 aaKnown RBP6.36□□□□□ -1.39
FGD4-213ENST00000546442 PRR36Q9H6K5 1346 aa6.36□□□□□ -1.39
FGD4-213ENST00000546442 RGS17Q9UGC6 210 aaPredicted RBP6.36□□□□□ -1.39
FGD4-213ENST00000546442 USP19O94966 1318 aa6.36□□□□□ -1.39
FGD4-213ENST00000546442 PAPPAQ13219 1627 aa6.36□□□□□ -1.39
FGD4-213ENST00000546442 JCADQ9P266 1359 aa6.36□□□□□ -1.39
FGD4-213ENST00000546442 USP31Q70CQ4 1352 aa6.35□□□□□ -1.39
FGD4-213ENST00000546442 SPATA31A6Q5VVP1 1343 aa6.35□□□□□ -1.39
FGD4-213ENST00000546442 TRIM26Q12899 539 aaPredicted RBP6.35□□□□□ -1.39
FGD4-213ENST00000546442 OVOS2A0A0J9YW53 1432 aa6.35□□□□□ -1.39
FGD4-213ENST00000546442 BCL9O00512 1426 aa6.35□□□□□ -1.39
FGD4-213ENST00000546442 OVOS2Q6IE36 1432 aa6.35□□□□□ -1.39
FGD4-213ENST00000546442 CPDO75976 1380 aa6.34□□□□□ -1.39
FGD4-213ENST00000546442 PLEKHG2Q9H7P9 1386 aa6.34□□□□□ -1.39
FGD4-213ENST00000546442 SLC26A8Q96RN1 970 aa6.34□□□□□ -1.39
FGD4-213ENST00000546442 STAG3Q9UJ98 1225 aa6.34□□□□□ -1.39
FGD4-213ENST00000546442 SLAIN2Q9P270 581 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 NINLQ9Y2I6 1382 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 PLEKHG3A1L390 1219 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 NBPF8Q3BBV2 869 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 NUTM2DQ5VT03 806 aaPredicted RBP6.33□□□□□ -1.4
FGD4-213ENST00000546442 TESK2Q96S53 571 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 USP6P35125 1406 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 CADPS2Q86UW7 1296 aa6.33□□□□□ -1.4
FGD4-213ENST00000546442 NUP188Q5SRE5 1749 aa6.32□□□□□ -1.4
FGD4-213ENST00000546442 PLEKHG5O94827 1062 aa6.32□□□□□ -1.4
FGD4-213ENST00000546442 HSPA1LP34931 641 aa6.32□□□□□ -1.4
FGD4-213ENST00000546442 TOM1O60784 492 aa6.32□□□□□ -1.4
FGD4-213ENST00000546442 PCGF6Q9BYE7 350 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms