RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
PDE4D-226ENST00000546160 APPP05067 770 aa7.79□□□□□ -1.16
PDE4D-226ENST00000546160 XBP1P17861 261 aa7.79□□□□□ -1.16
PDE4D-226ENST00000546160 RBM19Q9Y4C8 960 aaKnown RBP7.79□□□□□ -1.16
PDE4D-226ENST00000546160 HIP1O00291 1037 aa7.79□□□□□ -1.16
PDE4D-226ENST00000546160 RRP1P56182 461 aaKnown RBP7.79□□□□□ -1.16
PDE4D-226ENST00000546160 INTS3Q68E01 1043 aaKnown RBP7.79□□□□□ -1.16
PDE4D-226ENST00000546160 BRMS1Q9HCU9 246 aa7.79□□□□□ -1.16
PDE4D-226ENST00000546160 POLA1P09884 1462 aaPredicted RBP7.79□□□□□ -1.16
PDE4D-226ENST00000546160 BRD4O60885 1362 aaPredicted RBP7.79□□□□□ -1.16
PDE4D-226ENST00000546160 SAFBQ15424 915 aaKnown RBP eCLIP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 PLEKHO1Q53GL0 409 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 CCDC30Q5VVM6 783 aa7.78□□□□□ -1.16
PDE4D-226ENST00000546160 SLC3A2P08195 630 aaKnown RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 DZIP1LQ8IYY4 767 aaKnown RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 PRKRIP1Q9H875 184 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 RRP7AQ9Y3A4 280 aaKnown RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 NESP48681 1621 aa7.78□□□□□ -1.16
PDE4D-226ENST00000546160 CPLX1O14810 134 aa7.78□□□□□ -1.16
PDE4D-226ENST00000546160 CREBRFQ8IUR6 639 aa7.78□□□□□ -1.16
PDE4D-226ENST00000546160 RPGRIP1LQ68CZ1 1315 aa7.78□□□□□ -1.16
PDE4D-226ENST00000546160 CCDC43Q96MW1 224 aaKnown RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 SLKQ9H2G2 1235 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-226ENST00000546160 FKBP5Q13451 457 aaPredicted RBP7.77□□□□□ -1.16
PDE4D-226ENST00000546160 ABTB2Q8N961 1025 aa7.77□□□□□ -1.17
PDE4D-226ENST00000546160 KIAA1107Q9UPP5 1409 aa7.77□□□□□ -1.17
PDE4D-226ENST00000546160 PBRM1Q86U86 1689 aa7.77□□□□□ -1.17
PDE4D-226ENST00000546160 SF3B2Q13435 895 aaKnown RBP7.77□□□□□ -1.17
PDE4D-226ENST00000546160 PES1O00541 588 aaKnown RBP7.77□□□□□ -1.17
PDE4D-226ENST00000546160 IPO7O95373 1038 aaKnown RBP7.77□□□□□ -1.17
PDE4D-226ENST00000546160 BECN2A8MW95 431 aa7.77□□□□□ -1.17
PDE4D-226ENST00000546160 PCF11O94913 1555 aaKnown RBP7.77□□□□□ -1.17
PDE4D-226ENST00000546160 ERC1Q8IUD2 1116 aa7.77□□□□□ -1.17
PDE4D-226ENST00000546160 PSMA5P28066 241 aa7.76□□□□□ -1.17
PDE4D-226ENST00000546160 PNISRQ8TF01 805 aaKnown RBP7.76□□□□□ -1.17
PDE4D-226ENST00000546160 NFXL1Q6ZNB6 911 aa7.76□□□□□ -1.17
PDE4D-226ENST00000546160 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
PDE4D-226ENST00000546160 CNTROBQ8N137 903 aa7.76□□□□□ -1.17
PDE4D-226ENST00000546160 ANO2Q9NQ90 1003 aa7.76□□□□□ -1.17
PDE4D-226ENST00000546160 MCTP1Q6DN14 999 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 RALYLQ86SE5 291 aaKnown RBP7.75□□□□□ -1.17
PDE4D-226ENST00000546160 SART3Q15020 963 aaKnown RBP7.75□□□□□ -1.17
PDE4D-226ENST00000546160 KIAA0586Q9BVV6 1533 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 GPS2Q13227 327 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 ANKLE2Q86XL3 938 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 FBXW7Q969H0 707 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-226ENST00000546160 TBC1D2BQ9UPU7 963 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 ABCA10Q8WWZ4 1543 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 ANKRD30BQ9BXX2 1392 aa7.75□□□□□ -1.17
PDE4D-226ENST00000546160 TATP17735 454 aaPredicted RBP7.75□□□□□ -1.17
PDE4D-226ENST00000546160 APAF1O14727 1248 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 CT47B1P0C2W7 299 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 UBTFL1P0CB47 393 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 GNL3LQ9NVN8 582 aaKnown RBP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 GNAI3P08754 354 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 NLRP6P59044 892 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 NUCB2P80303 420 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 RAPGEF6Q8TEU7 1601 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 PHF23Q9BUL5 403 aaPredicted RBP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 THOC2Q8NI27 1593 aaKnown RBP7.74□□□□□ -1.17
PDE4D-226ENST00000546160 WWC2Q6AWC2 1192 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 PEG3Q9GZU2 1588 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 SPG7Q9UQ90 795 aa7.74□□□□□ -1.17
PDE4D-226ENST00000546160 DHX16O60231 1041 aaKnown RBP7.73□□□□□ -1.17
PDE4D-226ENST00000546160 DEKP35659 375 aaKnown RBP7.73□□□□□ -1.17
PDE4D-226ENST00000546160 NLRP2Q9NX02 1062 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 MAP3K1Q13233 1512 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 ESCO1Q5FWF5 840 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 ARAP1Q96P48 1450 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 ELL2O00472 640 aaPredicted RBP7.73□□□□□ -1.17
PDE4D-226ENST00000546160 NOL8Q76FK4 1167 aaKnown RBP7.73□□□□□ -1.17
PDE4D-226ENST00000546160 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
PDE4D-226ENST00000546160 CRBNQ96SW2 442 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 MCM2P49736 904 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 ERBINQ96RT1 1412 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 ATAD2Q6PL18 1390 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 RAD21O60216 631 aa7.73□□□□□ -1.17
PDE4D-226ENST00000546160 NAT10Q9H0A0 1025 aaKnown RBP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 R3HCC1Q9Y3T6 440 aaKnown RBP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 KRI1Q8N9T8 703 aaKnown RBP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 KIF7Q2M1P5 1343 aa7.72□□□□□ -1.17
PDE4D-226ENST00000546160 PCMTD1Q96MG8 357 aaPredicted RBP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 SMC3Q9UQE7 1217 aa7.72□□□□□ -1.17
PDE4D-226ENST00000546160 RTEL1-TNFRSF6BF6WH68 1400 aa7.72□□□□□ -1.17
PDE4D-226ENST00000546160 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 CLASRPQ8N2M8 674 aaKnown RBP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 DDX49Q9Y6V7 483 aaKnown RBP7.72□□□□□ -1.17
PDE4D-226ENST00000546160 RDXP35241 583 aaKnown RBP7.71□□□□□ -1.17
PDE4D-226ENST00000546160 EPS15P42566 896 aa7.71□□□□□ -1.17
PDE4D-226ENST00000546160 CCDC27Q2M243 656 aa7.71□□□□□ -1.17
PDE4D-226ENST00000546160 CNKSR2Q8WXI2 1034 aa7.71□□□□□ -1.17
PDE4D-226ENST00000546160 LETM1O95202 739 aaPredicted RBP7.71□□□□□ -1.17
PDE4D-226ENST00000546160 CABP2Q9NPB3 220 aa7.71□□□□□ -1.17
PDE4D-226ENST00000546160 BICRAQ9NZM4 1560 aa7.71□□□□□ -1.18
PDE4D-226ENST00000546160 SETD1BQ9UPS6 1966 aaKnown RBP7.71□□□□□ -1.18
PDE4D-226ENST00000546160 SASS6Q6UVJ0 657 aa7.71□□□□□ -1.18
PDE4D-226ENST00000546160 BCL2L13Q9BXK5 485 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms