RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NUDCQ9Y266 331 aa8.71□□□□□ -1.02
SNHG1-225ENST00000545920 WASHC2CQ9Y4E1 1318 aa8.71□□□□□ -1.02
SNHG1-225ENST00000545920 BRD4O60885 1362 aaPredicted RBP8.71□□□□□ -1.02
SNHG1-225ENST00000545920 KIF15Q9NS87 1388 aa8.71□□□□□ -1.02
SNHG1-225ENST00000545920 NBPF8Q3BBV2 869 aa8.7□□□□□ -1.02
SNHG1-225ENST00000545920 C14orf37Q86TY3 774 aa8.7□□□□□ -1.02
SNHG1-225ENST00000545920 DDX27Q96GQ7 796 aaKnown RBP8.7□□□□□ -1.02
SNHG1-225ENST00000545920 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
SNHG1-225ENST00000545920 USP47Q96K76 1375 aa8.7□□□□□ -1.02
SNHG1-225ENST00000545920 PTPRGP23470 1445 aa8.7□□□□□ -1.02
SNHG1-225ENST00000545920 CROCC2H7BZ55 1655 aa8.69□□□□□ -1.02
SNHG1-225ENST00000545920 PDE3BQ13370 1112 aa8.69□□□□□ -1.02
SNHG1-225ENST00000545920 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
SNHG1-225ENST00000545920 BARGINQ6ZT62 677 aa8.69□□□□□ -1.02
SNHG1-225ENST00000545920 ANKRD50Q9ULJ7 1429 aa8.69□□□□□ -1.02
SNHG1-225ENST00000545920 SYNJ2O15056 1496 aa8.69□□□□□ -1.02
SNHG1-225ENST00000545920 NUP160Q12769 1436 aa8.68□□□□□ -1.02
SNHG1-225ENST00000545920 KDM5CP41229 1560 aa8.68□□□□□ -1.02
SNHG1-225ENST00000545920 ARHGEF5Q12774 1597 aa8.68□□□□□ -1.02
SNHG1-225ENST00000545920 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
SNHG1-225ENST00000545920 ARSIQ5FYB1 569 aa8.67□□□□□ -1.02
SNHG1-225ENST00000545920 LRPPRCP42704 1394 aaKnown RBP8.66□□□□□ -1.02
SNHG1-225ENST00000545920 FAM9BQ8IZU0 186 aa8.66□□□□□ -1.02
SNHG1-225ENST00000545920 ABCC10Q5T3U5 1492 aa8.65□□□□□ -1.02
SNHG1-225ENST00000545920 MYBBP1AQ9BQG0 1328 aaKnown RBP8.65□□□□□ -1.02
SNHG1-225ENST00000545920 C9orf84Q5VXU9 1444 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 PRG4Q92954 1404 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-225ENST00000545920 GPRASP1Q5JY77 1395 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 PLEKHD1A6NEE1 506 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 TSPY4P0CV99 314 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 TSPY10P0CW01 314 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 ANKRD13DQ6ZTN6 518 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 PNISRQ8TF01 805 aaKnown RBP8.64□□□□□ -1.03
SNHG1-225ENST00000545920 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 ABCA8O94911 1581 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 CEP170Q5SW79 1584 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 PLEKHH2Q8IVE3 1493 aa8.64□□□□□ -1.03
SNHG1-225ENST00000545920 LAMC1P11047 1609 aa8.63□□□□□ -1.03
SNHG1-225ENST00000545920 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
SNHG1-225ENST00000545920 NUP155O75694 1391 aa8.62□□□□□ -1.03
SNHG1-225ENST00000545920 EIF4G3O43432 1585 aaKnown RBP8.62□□□□□ -1.03
SNHG1-225ENST00000545920 MS4A1P11836 297 aa8.62□□□□□ -1.03
SNHG1-225ENST00000545920 ANP32AP39687 249 aaKnown RBP8.62□□□□□ -1.03
SNHG1-225ENST00000545920 CCDC184Q52MB2 194 aa8.62□□□□□ -1.03
SNHG1-225ENST00000545920 BCL11AQ9H165 835 aa8.62□□□□□ -1.03
SNHG1-225ENST00000545920 NOP58Q9Y2X3 529 aaKnown RBP8.62□□□□□ -1.03
SNHG1-225ENST00000545920 MAST1Q9Y2H9 1570 aa8.61□□□□□ -1.03
SNHG1-225ENST00000545920 ZNF644Q9H582 1327 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-225ENST00000545920 ZNF608Q9ULD9 1512 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-225ENST00000545920 TCERG1O14776 1098 aaKnown RBP8.61□□□□□ -1.03
SNHG1-225ENST00000545920 LSM11P83369 360 aaKnown RBP eCLIP8.61□□□□□ -1.03
SNHG1-225ENST00000545920 NLRP13Q86W25 1043 aa8.61□□□□□ -1.03
SNHG1-225ENST00000545920 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
SNHG1-225ENST00000545920 AK7Q96M32 723 aa8.61□□□□□ -1.03
SNHG1-225ENST00000545920 CARD11Q9BXL7 1154 aa8.61□□□□□ -1.03
SNHG1-225ENST00000545920 GPHNQ9NQX3 736 aaPredicted RBP8.61□□□□□ -1.03
SNHG1-225ENST00000545920 ATP10AO60312 1499 aa8.61□□□□□ -1.03
SNHG1-225ENST00000545920 CCDC141Q6ZP82 1450 aa8.6□□□□□ -1.03
SNHG1-225ENST00000545920 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
SNHG1-225ENST00000545920 KHSRPQ92945 711 aaKnown RBP eCLIP8.6□□□□□ -1.031e-12■■■■□ 20.3
SNHG1-225ENST00000545920 PARD3Q8TEW0 1356 aa8.6□□□□□ -1.03
SNHG1-225ENST00000545920 EIF2AK4Q9P2K8 1649 aaKnown RBP8.59□□□□□ -1.03
SNHG1-225ENST00000545920 PBX2P40425 430 aa8.59□□□□□ -1.03
SNHG1-225ENST00000545920 MLLT3P42568 568 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-225ENST00000545920 PPP1R15BQ5SWA1 713 aa8.59□□□□□ -1.03
SNHG1-225ENST00000545920 JPH4Q96JJ6 628 aa8.59□□□□□ -1.03
SNHG1-225ENST00000545920 DAXXQ9UER7 740 aaPredicted RBP8.59□□□□□ -1.03
SNHG1-225ENST00000545920 PLB1Q6P1J6 1458 aa8.58□□□□□ -1.04
SNHG1-225ENST00000545920 BCORL1Q5H9F3 1711 aa8.58□□□□□ -1.04
SNHG1-225ENST00000545920 PRAG1Q86YV5 1406 aa8.58□□□□□ -1.04
SNHG1-225ENST00000545920 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
SNHG1-225ENST00000545920 B4GALNT3Q6L9W6 998 aa8.58□□□□□ -1.04
SNHG1-225ENST00000545920 IPO9Q96P70 1041 aaKnown RBP8.58□□□□□ -1.04
SNHG1-225ENST00000545920 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
SNHG1-225ENST00000545920 E9PCH4 1651 aa8.58□□□□□ -1.04
SNHG1-225ENST00000545920 ATP10BO94823 1461 aa8.57□□□□□ -1.04
SNHG1-225ENST00000545920 CCDC144AA2RUR9 1427 aa8.57□□□□□ -1.04
SNHG1-225ENST00000545920 SPDYE16A6NNV3 312 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-225ENST00000545920 IRX6P78412 446 aaPredicted RBP8.57□□□□□ -1.04
SNHG1-225ENST00000545920 CDC42BPAQ5VT25 1732 aa8.57□□□□□ -1.04
SNHG1-225ENST00000545920 UNC13BO14795 1591 aa8.56□□□□□ -1.04
SNHG1-225ENST00000545920 KIF3CO14782 793 aa8.56□□□□□ -1.04
SNHG1-225ENST00000545920 RRP1P56182 461 aaKnown RBP8.56□□□□□ -1.04
SNHG1-225ENST00000545920 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
SNHG1-225ENST00000545920 NGEFQ8N5V2 710 aa8.56□□□□□ -1.04
SNHG1-225ENST00000545920 COL17A1Q9UMD9 1497 aaPredicted RBP8.56□□□□□ -1.04
SNHG1-225ENST00000545920 FAM135AQ9P2D6 1515 aa8.55□□□□□ -1.04
SNHG1-225ENST00000545920 PDIA6Q15084 440 aa8.55□□□□□ -1.04
SNHG1-225ENST00000545920 PLXNC1O60486 1568 aa8.55□□□□□ -1.04
SNHG1-225ENST00000545920 BLMP54132 1417 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-225ENST00000545920 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 ERCC6Q03468 1493 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 MAGI2Q86UL8 1455 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 EMILIN3Q9NT22 766 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 RCAN3Q9UKA8 241 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 PREX2Q70Z35 1606 aa8.54□□□□□ -1.04
SNHG1-225ENST00000545920 PRDM15P57071 1507 aaPredicted RBP8.54□□□□□ -1.04
SNHG1-225ENST00000545920 NPC1L1Q9UHC9 1359 aa8.53□□□□□ -1.04
SNHG1-225ENST00000545920 ST20-MTHFSA0A0A6YYL1 179 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms