RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 HS6ST3Q8IZP7 471 aa5.61□□□□□ -1.51
LPCAT3-212ENST00000545459 TBX22Q9Y458 520 aa5.61□□□□□ -1.51
LPCAT3-212ENST00000545459 PHLPP1O60346 1717 aa5.6□□□□□ -1.51
LPCAT3-212ENST00000545459 VGFO15240 615 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-212ENST00000545459 CHRDL2Q6WN34 429 aa5.6□□□□□ -1.51
LPCAT3-212ENST00000545459 PAXIP1Q6ZW49 1069 aaPredicted RBP5.6□□□□□ -1.51
LPCAT3-212ENST00000545459 SPRYD3Q8NCJ5 442 aa5.6□□□□□ -1.51
LPCAT3-212ENST00000545459 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.6□□□□□ -1.51
LPCAT3-212ENST00000545459 E9PCH4 1651 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 ADAMTS13Q76LX8 1427 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 NCOA3Q9Y6Q9 1424 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 ROCK1Q13464 1354 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 JCADQ9P266 1359 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 NUTM2DQ5VT03 806 aaPredicted RBP5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 C14orf37Q86TY3 774 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 RNF25Q96BH1 459 aaPredicted RBP5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 CFAP44Q96MT7 982 aa5.59□□□□□ -1.51
LPCAT3-212ENST00000545459 COL16A1Q07092 1604 aaPredicted RBP5.59□□□□□ -1.52
LPCAT3-212ENST00000545459 DIP2AQ14689 1571 aa5.59□□□□□ -1.52
LPCAT3-212ENST00000545459 PIK3R4Q99570 1358 aa5.58□□□□□ -1.52
LPCAT3-212ENST00000545459 CADPS2Q86UW7 1296 aa5.58□□□□□ -1.52
LPCAT3-212ENST00000545459 VSIG10Q8N0Z9 540 aa5.58□□□□□ -1.52
LPCAT3-212ENST00000545459 SGIP1Q9BQI5 828 aa5.58□□□□□ -1.52
LPCAT3-212ENST00000545459 C19orf44Q9H6X5 657 aa5.58□□□□□ -1.52
LPCAT3-212ENST00000545459 IQGAP3Q86VI3 1631 aa5.58□□□□□ -1.52
LPCAT3-212ENST00000545459 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 NUP155O75694 1391 aa5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 SPATA31A6Q5VVP1 1343 aa5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 PAK3O75914 559 aaPredicted RBP5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 PYGBP11216 843 aa5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 ATF3P18847 181 aa5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 TSPYL2Q9H2G4 693 aaPredicted RBP5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 AMOTL2Q9Y2J4 779 aa5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 TRPM2O94759 1503 aa5.57□□□□□ -1.52
LPCAT3-212ENST00000545459 LRP6O75581 1613 aa5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 AHDC1Q5TGY3 1603 aaPredicted RBP5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 ITGAEP38570 1179 aa5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 ZNF467Q7Z7K2 595 aaPredicted RBP5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 SETD1AO15047 1707 aaKnown RBP5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 SHPRHQ149N8 1683 aa5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 PTPRUQ92729 1446 aa5.56□□□□□ -1.52
LPCAT3-212ENST00000545459 STK25O00506 426 aa5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 MEX3CQ5U5Q3 659 aaKnown RBP5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 ZNF772Q68DY9 489 aaPredicted RBP5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 BRINP3Q76B58 766 aa5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 PIP4P2Q8N4L2 257 aa5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 DCCP43146 1447 aa5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 NRXN3Q9Y4C0 1643 aa5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 SETBP1Q9Y6X0 1596 aa5.55□□□□□ -1.52
LPCAT3-212ENST00000545459 SPHKAPQ2M3C7 1700 aa5.54□□□□□ -1.52
LPCAT3-212ENST00000545459 XRN1Q8IZH2 1706 aaKnown RBP5.54□□□□□ -1.52
LPCAT3-212ENST00000545459 METP08581 1390 aa5.54□□□□□ -1.52
LPCAT3-212ENST00000545459 ASXL1Q8IXJ9 1541 aa5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 NUTM2BA6NNL0 878 aaPredicted RBP5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 NUTM2EB1AL46 878 aaPredicted RBP5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 ZNF326Q5BKZ1 582 aaKnown RBP5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 PPARGC1BQ86YN6 1023 aaKnown RBP5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 NUTM2AQ8IVF1 878 aaPredicted RBP5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 TRIM52Q96A61 297 aa5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 RYDENQ9NUL5 291 aaKnown RBP5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 MST1RQ04912 1400 aa5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 SETD5Q9C0A6 1442 aa5.53□□□□□ -1.52
LPCAT3-212ENST00000545459 NHSL1Q5SYE7 1610 aa5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 ADGRL3Q9HAR2 1447 aa5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 RXRBP28702 533 aa5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 UPF1Q92900 1129 aaKnown RBP eCLIP5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 LRRC59Q96AG4 307 aaKnown RBP5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 ZFP91Q96JP5 570 aaPredicted RBP5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 STK24Q9Y6E0 443 aa5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 NEXMIFQ5QGS0 1516 aa5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 CLTCL1P53675 1640 aa5.52□□□□□ -1.53
LPCAT3-212ENST00000545459 CDK12Q9NYV4 1490 aaPredicted RBP5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 AFF2P51816 1311 aa5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 DDX17Q92841 729 aaKnown RBP5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 BCL11BQ9C0K0 894 aaPredicted RBP5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 CCDC61Q9Y6R9 512 aa5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 NALCNQ8IZF0 1738 aa5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 KIF1BO60333 1816 aa5.51□□□□□ -1.53
LPCAT3-212ENST00000545459 PDAP1Q13442 181 aaKnown RBP5.5□□□□□ -1.53
LPCAT3-212ENST00000545459 ZNF579Q8NAF0 562 aaKnown RBP5.5□□□□□ -1.53
LPCAT3-212ENST00000545459 PNPLA6Q8IY17 1366 aa5.5□□□□□ -1.53
LPCAT3-212ENST00000545459 NAIPQ13075 1403 aa5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 PTCH1Q13635 1447 aa5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 RRBP1Q9P2E9 1410 aaKnown RBP5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 RBM6P78332 1123 aaKnown RBP5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 C8orf37Q96NL8 207 aa5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 QTRT2Q9H974 415 aaKnown RBP5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 ROBO2Q9HCK4 1378 aa5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 C1orf167Q5SNV9 1468 aa5.49□□□□□ -1.53
LPCAT3-212ENST00000545459 RPGRIP1LQ68CZ1 1315 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 RGS12O14924 1447 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 LAMC1P11047 1609 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 ADAMTS2O95450 1211 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 NKX1-1Q15270 411 aaPredicted RBP5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 NGLY1Q96IV0 654 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 ORAI2Q96SN7 254 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 TSHZ2Q9NRE2 1034 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 PCDHB13Q9Y5F0 798 aa5.48□□□□□ -1.53
LPCAT3-212ENST00000545459 PRAG1Q86YV5 1406 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms