RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 C3orf67Q6ZVT6 689 aa9.9□□□□□ -0.82
CPSF7-222ENST00000544585 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
CPSF7-222ENST00000544585 SAMD9Q5K651 1589 aa9.89□□□□□ -0.83
CPSF7-222ENST00000544585 ZMYM4Q5VZL5 1548 aa9.89□□□□□ -0.83
CPSF7-222ENST00000544585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPSF7-222ENST00000544585 HRCP23327 699 aa9.89□□□□□ -0.83
CPSF7-222ENST00000544585 PHOX2BQ99453 314 aa9.89□□□□□ -0.83
CPSF7-222ENST00000544585 PTPRTO14522 1441 aa9.89□□□□□ -0.83
CPSF7-222ENST00000544585 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 RICTORQ6R327 1708 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 OATP04181 439 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 EVX2Q03828 476 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
CPSF7-222ENST00000544585 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 AFAP1Q8N556 730 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 COLQQ9Y215 455 aaPredicted RBP9.88□□□□□ -0.83
CPSF7-222ENST00000544585 PCDHGA10Q9Y5H3 936 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 C9orf84Q5VXU9 1444 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
CPSF7-222ENST00000544585 PROSER2Q86WR7 435 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-222ENST00000544585 FAM217BQ9NTX9 383 aaPredicted RBP9.87□□□□□ -0.83
CPSF7-222ENST00000544585 POLR3EQ9NVU0 708 aa9.87□□□□□ -0.83
CPSF7-222ENST00000544585 HECW1Q76N89 1606 aa9.86□□□□□ -0.83
CPSF7-222ENST00000544585 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
CPSF7-222ENST00000544585 FBXW7Q969H0 707 aa9.86□□□□□ -0.83
CPSF7-222ENST00000544585 ARHGEF12Q9NZN5 1544 aa9.86□□□□□ -0.83
CPSF7-222ENST00000544585 TTC37Q6PGP7 1564 aa9.85□□□□□ -0.83
CPSF7-222ENST00000544585 EEA1Q15075 1411 aa9.85□□□□□ -0.83
CPSF7-222ENST00000544585 METTL3Q86U44 580 aaKnown RBP9.85□□□□□ -0.83
CPSF7-222ENST00000544585 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-222ENST00000544585 TRAPPC8Q9Y2L5 1435 aa9.84□□□□□ -0.83
CPSF7-222ENST00000544585 ZBTB7CA1YPR0 619 aa9.84□□□□□ -0.83
CPSF7-222ENST00000544585 FAM161AQ3B820 660 aa9.83□□□□□ -0.84
CPSF7-222ENST00000544585 SLC39A7Q92504 469 aa9.83□□□□□ -0.84
CPSF7-222ENST00000544585 DCBLD2Q96PD2 775 aa9.83□□□□□ -0.84
CPSF7-222ENST00000544585 MYSM1Q5VVJ2 828 aa9.82□□□□□ -0.84
CPSF7-222ENST00000544585 CCDC97Q96F63 343 aaPredicted RBP9.82□□□□□ -0.84
CPSF7-222ENST00000544585 ZNF518AQ6AHZ1 1483 aa9.82□□□□□ -0.84
CPSF7-222ENST00000544585 FER1L4A9Z1Z3 1794 aa9.82□□□□□ -0.84
CPSF7-222ENST00000544585 PREX1Q8TCU6 1659 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 IQSEC2Q5JU85 1478 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
CPSF7-222ENST00000544585 DIXDC1Q155Q3 683 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 PADI6Q6TGC4 694 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 PELP1Q8IZL8 1130 aaKnown RBP9.81□□□□□ -0.84
CPSF7-222ENST00000544585 NLRP7Q8WX94 980 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.81□□□□□ -0.84
CPSF7-222ENST00000544585 SERPINA10Q9UK55 444 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 PCDHGA4Q9Y5G9 962 aa9.81□□□□□ -0.84
CPSF7-222ENST00000544585 UBAP1LF5GYI3 381 aa9.8□□□□□ -0.84
CPSF7-222ENST00000544585 C7P10643 843 aa9.8□□□□□ -0.84
CPSF7-222ENST00000544585 PXYLP1Q8TE99 480 aa9.8□□□□□ -0.84
CPSF7-222ENST00000544585 ADGRG1Q9Y653 693 aa9.8□□□□□ -0.84
CPSF7-222ENST00000544585 FMN1Q68DA7 1419 aa9.8□□□□□ -0.84
CPSF7-222ENST00000544585 STRCQ7RTU9 1775 aa9.79□□□□□ -0.84
CPSF7-222ENST00000544585 FNBP4Q8N3X1 1017 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-222ENST00000544585 CNTLNQ9NXG0 1405 aa9.79□□□□□ -0.84
CPSF7-222ENST00000544585 SIGLEC1Q9BZZ2 1709 aa9.79□□□□□ -0.84
CPSF7-222ENST00000544585 MLH3Q9UHC1 1453 aa9.79□□□□□ -0.84
CPSF7-222ENST00000544585 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
CPSF7-222ENST00000544585 BANK1Q8NDB2 785 aa9.78□□□□□ -0.84
CPSF7-222ENST00000544585 CDK13Q14004 1512 aaKnown RBP9.77□□□□□ -0.84
CPSF7-222ENST00000544585 CLIP1P30622 1438 aa9.77□□□□□ -0.85
CPSF7-222ENST00000544585 GABBR2O75899 941 aa9.77□□□□□ -0.85
CPSF7-222ENST00000544585 TBC1D2Q9BYX2 928 aa9.77□□□□□ -0.85
CPSF7-222ENST00000544585 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
CPSF7-222ENST00000544585 ZMYM3Q14202 1370 aa9.76□□□□□ -0.85
CPSF7-222ENST00000544585 TROQ12816 1431 aaPredicted RBP9.76□□□□□ -0.85
CPSF7-222ENST00000544585 LTBP4Q8N2S1 1624 aa9.76□□□□□ -0.85
CPSF7-222ENST00000544585 RFC5P40937 340 aa9.76□□□□□ -0.85
CPSF7-222ENST00000544585 AGLP35573 1532 aa9.76□□□□□ -0.85
CPSF7-222ENST00000544585 NCOA1Q15788 1441 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 POTEFA5A3E0 1075 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 TOM1O60784 492 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 FOSBP53539 338 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 RBM46Q8TBY0 533 aaKnown RBP9.75□□□□□ -0.85
CPSF7-222ENST00000544585 ZDHHC16Q969W1 377 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
CPSF7-222ENST00000544585 COG6Q9Y2V7 657 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 ARHGAP5Q13017 1502 aa9.75□□□□□ -0.85
CPSF7-222ENST00000544585 NPATQ14207 1427 aa9.74□□□□□ -0.85
CPSF7-222ENST00000544585 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
CPSF7-222ENST00000544585 KDM5CP41229 1560 aa9.74□□□□□ -0.85
CPSF7-222ENST00000544585 REREQ9P2R6 1566 aa9.74□□□□□ -0.85
CPSF7-222ENST00000544585 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
CPSF7-222ENST00000544585 NPM2Q86SE8 214 aaKnown RBP9.73□□□□□ -0.85
CPSF7-222ENST00000544585 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
CPSF7-222ENST00000544585 TTC13Q8NBP0 860 aa9.73□□□□□ -0.85
CPSF7-222ENST00000544585 SNRKQ9NRH2 765 aa9.73□□□□□ -0.85
CPSF7-222ENST00000544585 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
CPSF7-222ENST00000544585 WWC1Q8IX03 1113 aa9.72□□□□□ -0.85
CPSF7-222ENST00000544585 CCDC9Q9Y3X0 531 aaKnown RBP9.72□□□□□ -0.85
CPSF7-222ENST00000544585 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
CPSF7-222ENST00000544585 MYO5CQ9NQX4 1742 aa9.71□□□□□ -0.85
CPSF7-222ENST00000544585 HNRNPMP52272 730 aaKnown RBP eCLIP9.71□□□□□ -0.86
CPSF7-222ENST00000544585 PRSS12P56730 875 aa9.71□□□□□ -0.86
CPSF7-222ENST00000544585 GGT6Q6P531 493 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 881.6 ms