RNA–Protein interactions for RNA: ENST00000544496.5

PCMT1-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 2 BASIC

Gene PCMT1, Length 1,628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-211ENST00000544496 PIK3R4Q99570 1358 aa31.94■■■□□ 2.7
PCMT1-211ENST00000544496 NINLQ9Y2I6 1382 aa31.94■■■□□ 2.7
PCMT1-211ENST00000544496 MINK1Q8N4C8 1332 aaPredicted RBP31.93■■■□□ 2.7
PCMT1-211ENST00000544496 ATAD2Q6PL18 1390 aa31.92■■■□□ 2.7
PCMT1-211ENST00000544496 SRPK2P78362 688 aaKnown RBP31.89■■■□□ 2.7
PCMT1-211ENST00000544496 WAPLQ7Z5K2 1190 aa31.89■■■□□ 2.7
PCMT1-211ENST00000544496 YTHDC1Q96MU7 727 aaKnown RBP31.87■■■□□ 2.69
PCMT1-211ENST00000544496 NPC1L1Q9UHC9 1359 aa31.87■■■□□ 2.69
PCMT1-211ENST00000544496 CENPBP07199 599 aaPredicted RBP31.86■■■□□ 2.69
PCMT1-211ENST00000544496 TMC1Q8TDI8 760 aa31.86■■■□□ 2.69
PCMT1-211ENST00000544496 PLEKHH1Q9ULM0 1364 aa31.86■■■□□ 2.69
PCMT1-211ENST00000544496 CABP2Q9NPB3 220 aa31.86■■■□□ 2.69
PCMT1-211ENST00000544496 AMOTL2Q9Y2J4 779 aa31.85■■■□□ 2.69
PCMT1-211ENST00000544496 PARD3Q8TEW0 1356 aa31.85■■■□□ 2.69
PCMT1-211ENST00000544496 CDK19Q9BWU1 502 aa31.84■■■□□ 2.69
PCMT1-211ENST00000544496 PTCH1Q13635 1447 aa31.84■■■□□ 2.69
PCMT1-211ENST00000544496 MYBBP1AQ9BQG0 1328 aaKnown RBP31.83■■■□□ 2.69
PCMT1-211ENST00000544496 ROBO2Q9HCK4 1378 aa31.83■■■□□ 2.69
PCMT1-211ENST00000544496 PTPRUQ92729 1446 aa31.82■■■□□ 2.68
PCMT1-211ENST00000544496 SLC12A5Q9H2X9 1139 aa31.81■■■□□ 2.68
PCMT1-211ENST00000544496 MRS2Q9HD23 443 aa31.8■■■□□ 2.68
PCMT1-211ENST00000544496 NPHP4O75161 1426 aaPredicted RBP31.79■■■□□ 2.68
PCMT1-211ENST00000544496 WASLO00401 505 aaPredicted RBP31.79■■■□□ 2.68
PCMT1-211ENST00000544496 ANKRD36BQ8N2N9 1353 aa31.79■■■□□ 2.68
PCMT1-211ENST00000544496 CNGB1Q14028 1251 aaPredicted RBP31.78■■■□□ 2.68
PCMT1-211ENST00000544496 AMER1Q5JTC6 1135 aaPredicted RBP31.78■■■□□ 2.68
PCMT1-211ENST00000544496 CC2D1BQ5T0F9 858 aaKnown RBP31.78■■■□□ 2.68
PCMT1-211ENST00000544496 KDM4FA0A1W2PPD8 638 aa31.77■■■□□ 2.68
PCMT1-211ENST00000544496 TERF2IPQ9NYB0 399 aa31.75■■■□□ 2.67
PCMT1-211ENST00000544496 ADGRB2O60241 1585 aa31.75■■■□□ 2.67
PCMT1-211ENST00000544496 XRN1Q8IZH2 1706 aaKnown RBP31.75■■■□□ 2.67
PCMT1-211ENST00000544496 BRD4O60885 1362 aaPredicted RBP31.74■■■□□ 2.67
PCMT1-211ENST00000544496 CARD14Q9BXL6 1004 aa31.74■■■□□ 2.67
PCMT1-211ENST00000544496 NLRP13Q86W25 1043 aa31.73■■■□□ 2.67
PCMT1-211ENST00000544496 NSD3Q9BZ95 1437 aa31.7■■■□□ 2.66
PCMT1-211ENST00000544496 USP32Q8NFA0 1604 aa31.69■■■□□ 2.66
PCMT1-211ENST00000544496 HDGFL2Q7Z4V5 671 aaPredicted RBP31.68■■■□□ 2.66
PCMT1-211ENST00000544496 CGNL1Q0VF96 1302 aa31.68■■■□□ 2.66
PCMT1-211ENST00000544496 CCDC184Q52MB2 194 aa31.67■■■□□ 2.66
PCMT1-211ENST00000544496 NCKAP5LQ9HCH0 1330 aa31.67■■■□□ 2.66
PCMT1-211ENST00000544496 KCNA6P17658 529 aa31.66■■■□□ 2.66
PCMT1-211ENST00000544496 CHD2O14647 1828 aaKnown RBP31.66■■■□□ 2.66
PCMT1-211ENST00000544496 ATP7BP35670 1465 aa31.65■■■□□ 2.66
PCMT1-211ENST00000544496 NSD2O96028 1365 aa31.65■■■□□ 2.66
PCMT1-211ENST00000544496 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.65■■■□□ 2.66
PCMT1-211ENST00000544496 CCDC61Q9Y6R9 512 aa31.64■■■□□ 2.66
PCMT1-211ENST00000544496 CABP1Q9NZU7 370 aa31.64■■■□□ 2.65
PCMT1-211ENST00000544496 A0A1W2PP64 1363 aa31.63■■■□□ 2.65
PCMT1-211ENST00000544496 NUDT16Q96DE0 195 aaKnown RBP31.63■■■□□ 2.65
PCMT1-211ENST00000544496 PPIP5K1Q6PFW1 1433 aa31.59■■■□□ 2.65
PCMT1-211ENST00000544496 CD163L1Q9NR16 1453 aa31.59■■■□□ 2.65
PCMT1-211ENST00000544496 FAM9BQ8IZU0 186 aa31.57■■■□□ 2.64
PCMT1-211ENST00000544496 PPP2R1AP30153 589 aa31.56■■■□□ 2.64
PCMT1-211ENST00000544496 PNISRQ8TF01 805 aaKnown RBP31.54■■■□□ 2.64
PCMT1-211ENST00000544496 MORC1Q86VD1 984 aa31.53■■■□□ 2.64
PCMT1-211ENST00000544496 ZNF692Q9BU19 519 aaPredicted RBP31.53■■■□□ 2.64
PCMT1-211ENST00000544496 NWD1Q149M9 1564 aa31.53■■■□□ 2.64
PCMT1-211ENST00000544496 LMTK3Q96Q04 1460 aa31.52■■■□□ 2.64
PCMT1-211ENST00000544496 CPSF1Q10570 1443 aaKnown RBP31.52■■■□□ 2.64
PCMT1-211ENST00000544496 CDC42BPGQ6DT37 1551 aa31.5■■■□□ 2.63
PCMT1-211ENST00000544496 PRR36Q9H6K5 1346 aa31.5■■■□□ 2.63
PCMT1-211ENST00000544496 ANKARQ7Z5J8 1434 aa31.49■■■□□ 2.63
PCMT1-211ENST00000544496 PLEKHG3A1L390 1219 aa31.49■■■□□ 2.63
PCMT1-211ENST00000544496 EDC4Q6P2E9 1401 aaKnown RBP31.47■■■□□ 2.63
PCMT1-211ENST00000544496 HSPA2P54652 639 aa31.47■■■□□ 2.63
PCMT1-211ENST00000544496 NKTRP30414 1462 aaKnown RBP31.46■■■□□ 2.63
PCMT1-211ENST00000544496 TOPAZ1Q8N9V7 1692 aa31.46■■■□□ 2.63
PCMT1-211ENST00000544496 HNRNPUQ00839 825 aaKnown RBP eCLIP31.44■■■□□ 2.62
PCMT1-211ENST00000544496 ADGRL3Q9HAR2 1447 aa31.44■■■□□ 2.62
PCMT1-211ENST00000544496 ITSN1Q15811 1721 aa31.43■■■□□ 2.62
PCMT1-211ENST00000544496 FYB1O15117 783 aa31.42■■■□□ 2.62
PCMT1-211ENST00000544496 INSRP06213 1382 aa31.42■■■□□ 2.62
PCMT1-211ENST00000544496 FMN2Q9NZ56 1722 aa31.39■■■□□ 2.62
PCMT1-211ENST00000544496 AKAP12Q02952 1782 aa31.39■■■□□ 2.62
PCMT1-211ENST00000544496 PROSER2Q86WR7 435 aaPredicted RBP31.38■■■□□ 2.61
PCMT1-211ENST00000544496 MON2Q7Z3U7 1717 aa31.38■■■□□ 2.61
PCMT1-211ENST00000544496 NALCNQ8IZF0 1738 aa31.38■■■□□ 2.61
PCMT1-211ENST00000544496 ANKRD26Q9UPS8 1709 aa31.37■■■□□ 2.61
PCMT1-211ENST00000544496 ACEP12821 1306 aa31.37■■■□□ 2.61
PCMT1-211ENST00000544496 NUTM2FA1L443 756 aa31.37■■■□□ 2.61
PCMT1-211ENST00000544496 C14orf37Q86TY3 774 aa31.37■■■□□ 2.61
PCMT1-211ENST00000544496 GGNBP2Q9H3C7 697 aa31.36■■■□□ 2.61
PCMT1-211ENST00000544496 KIF20BQ96Q89 1820 aa31.36■■■□□ 2.61
PCMT1-211ENST00000544496 NCOA3Q9Y6Q9 1424 aa31.36■■■□□ 2.61
PCMT1-211ENST00000544496 POLR3AO14802 1390 aaPredicted RBP31.36■■■□□ 2.61
PCMT1-211ENST00000544496 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.34■■■□□ 2.61
PCMT1-211ENST00000544496 WDR43Q15061 677 aaKnown RBP eCLIP31.33■■■□□ 2.61
PCMT1-211ENST00000544496 CFAP53Q96M91 514 aa31.31■■■□□ 2.6
PCMT1-211ENST00000544496 USP6P35125 1406 aa31.31■■■□□ 2.6
PCMT1-211ENST00000544496 TNNT2P45379 298 aaPredicted RBP31.31■■■□□ 2.6
PCMT1-211ENST00000544496 NGDNQ8NEJ9 315 aaKnown RBP31.31■■■□□ 2.6
PCMT1-211ENST00000544496 ZBED9Q6R2W3 1325 aa31.3■■■□□ 2.6
PCMT1-211ENST00000544496 SCAF1Q9H7N4 1312 aaKnown RBP31.3■■■□□ 2.6
PCMT1-211ENST00000544496 STRCQ7RTU9 1775 aa31.3■■■□□ 2.6
PCMT1-211ENST00000544496 C19orf44Q9H6X5 657 aa31.28■■■□□ 2.6
PCMT1-211ENST00000544496 TTC21AQ8NDW8 1320 aa31.27■■■□□ 2.6
PCMT1-211ENST00000544496 TTC21BQ7Z4L5 1316 aa31.26■■■□□ 2.6
PCMT1-211ENST00000544496 MTHFSP49914 203 aa31.26■■■□□ 2.59
PCMT1-211ENST00000544496 RBM33Q96EV2 1170 aaKnown RBP31.26■■■□□ 2.59
PCMT1-211ENST00000544496 COG3Q96JB2 828 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms