RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 TCP11L2Q8N4U5 519 aa15.87■□□□□ 0.13
SMCR5-201ENST00000543475 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
SMCR5-201ENST00000543475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMCR5-201ENST00000543475 HSP90AA1P07900 732 aaKnown RBP15.86■□□□□ 0.13
SMCR5-201ENST00000543475 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
SMCR5-201ENST00000543475 TRPM2O94759 1503 aa15.86■□□□□ 0.13
SMCR5-201ENST00000543475 ERVK-7P63135 1459 aa15.86■□□□□ 0.13
SMCR5-201ENST00000543475 TNNT2P45379 298 aaPredicted RBP15.86■□□□□ 0.13
SMCR5-201ENST00000543475 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
SMCR5-201ENST00000543475 DDX11L8A8MPP1 907 aa15.85■□□□□ 0.13
SMCR5-201ENST00000543475 HSCBQ8IWL3 235 aa15.85■□□□□ 0.13
SMCR5-201ENST00000543475 HSP90AA2PQ14568 343 aaPredicted RBP15.85■□□□□ 0.13
SMCR5-201ENST00000543475 MVPQ14764 893 aaKnown RBP15.85■□□□□ 0.13
SMCR5-201ENST00000543475 GRPEL1Q9HAV7 217 aa15.85■□□□□ 0.13
SMCR5-201ENST00000543475 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
SMCR5-201ENST00000543475 FTSJ3Q8IY81 847 aaKnown RBP15.84■□□□□ 0.13
SMCR5-201ENST00000543475 CLTCL1P53675 1640 aa15.84■□□□□ 0.13
SMCR5-201ENST00000543475 RTEL1-TNFRSF6BF6WH68 1400 aa15.83■□□□□ 0.12
SMCR5-201ENST00000543475 KIAA1210Q9ULL0 1709 aa15.83■□□□□ 0.12
SMCR5-201ENST00000543475 CFAP70Q5T0N1 1121 aa15.83■□□□□ 0.12
SMCR5-201ENST00000543475 SHPRHQ149N8 1683 aa15.83■□□□□ 0.12
SMCR5-201ENST00000543475 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
SMCR5-201ENST00000543475 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
SMCR5-201ENST00000543475 RRP9O43818 475 aaKnown RBP15.81■□□□□ 0.12
SMCR5-201ENST00000543475 ISY1Q9ULR0 285 aaKnown RBP15.81■□□□□ 0.12
SMCR5-201ENST00000543475 ESPNB1AK53 854 aa15.81■□□□□ 0.12
SMCR5-201ENST00000543475 DZIP1LQ8IYY4 767 aaKnown RBP15.81■□□□□ 0.12
SMCR5-201ENST00000543475 IQSEC2Q5JU85 1478 aa15.81■□□□□ 0.12
SMCR5-201ENST00000543475 PTPRTO14522 1441 aa15.8■□□□□ 0.12
SMCR5-201ENST00000543475 TRIM44Q96DX7 344 aaPredicted RBP15.8■□□□□ 0.12
SMCR5-201ENST00000543475 NSD3Q9BZ95 1437 aa15.79■□□□□ 0.12
SMCR5-201ENST00000543475 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
SMCR5-201ENST00000543475 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
SMCR5-201ENST00000543475 ZNF692Q9BU19 519 aaPredicted RBP15.78■□□□□ 0.12
SMCR5-201ENST00000543475 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
SMCR5-201ENST00000543475 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.11
SMCR5-201ENST00000543475 KANK1Q14678 1352 aa15.77■□□□□ 0.11
SMCR5-201ENST00000543475 HDAC1Q13547 482 aaPredicted RBP15.76■□□□□ 0.11
SMCR5-201ENST00000543475 ERBB4Q15303 1308 aa15.76■□□□□ 0.11
SMCR5-201ENST00000543475 MTHFSP49914 203 aa15.76■□□□□ 0.11
SMCR5-201ENST00000543475 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
SMCR5-201ENST00000543475 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
SMCR5-201ENST00000543475 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
SMCR5-201ENST00000543475 ABCA6Q8N139 1617 aa15.75■□□□□ 0.11
SMCR5-201ENST00000543475 TNPO1Q92973 898 aaKnown RBP15.75■□□□□ 0.11
SMCR5-201ENST00000543475 GBP4Q96PP9 640 aa15.75■□□□□ 0.11
SMCR5-201ENST00000543475 SHROOM2Q13796 1616 aa15.75■□□□□ 0.11
SMCR5-201ENST00000543475 MAP3K4Q9Y6R4 1608 aa15.75■□□□□ 0.11
SMCR5-201ENST00000543475 TRAPPC8Q9Y2L5 1435 aa15.75■□□□□ 0.11
SMCR5-201ENST00000543475 SPAG9O60271 1321 aaKnown RBP15.75■□□□□ 0.11
SMCR5-201ENST00000543475 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
SMCR5-201ENST00000543475 NCOA3Q9Y6Q9 1424 aa15.74■□□□□ 0.11
SMCR5-201ENST00000543475 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
SMCR5-201ENST00000543475 DDIT3P35638 169 aa15.74■□□□□ 0.11
SMCR5-201ENST00000543475 SLC12A5Q9H2X9 1139 aa15.74■□□□□ 0.11
SMCR5-201ENST00000543475 TET3O43151 1660 aa15.73■□□□□ 0.11
SMCR5-201ENST00000543475 PLCH2O75038 1416 aa15.73■□□□□ 0.11
SMCR5-201ENST00000543475 CT47B1P0C2W7 299 aaPredicted RBP15.73■□□□□ 0.11
SMCR5-201ENST00000543475 U2AF1L5P0DN76 240 aaPredicted RBP15.73■□□□□ 0.11
SMCR5-201ENST00000543475 TRIM27P14373 513 aa15.73■□□□□ 0.11
SMCR5-201ENST00000543475 RBM25P49756 843 aaKnown RBP15.73■□□□□ 0.11
SMCR5-201ENST00000543475 U2AF1Q01081 240 aaKnown RBP eCLIP15.73■□□□□ 0.11
SMCR5-201ENST00000543475 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
SMCR5-201ENST00000543475 SNX21Q969T3 373 aa15.73■□□□□ 0.11
SMCR5-201ENST00000543475 ZMYND15Q9H091 742 aa15.73■□□□□ 0.11
SMCR5-201ENST00000543475 SKOR2Q2VWA4 1001 aaPredicted RBP15.72■□□□□ 0.11
SMCR5-201ENST00000543475 GAS2L3Q86XJ1 694 aa15.72■□□□□ 0.11
SMCR5-201ENST00000543475 SMC5Q8IY18 1101 aa15.72■□□□□ 0.11
SMCR5-201ENST00000543475 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
SMCR5-201ENST00000543475 SBNO2Q9Y2G9 1366 aa15.72■□□□□ 0.11
SMCR5-201ENST00000543475 ZNF518AQ6AHZ1 1483 aa15.72■□□□□ 0.11
SMCR5-201ENST00000543475 ABCC1P33527 1531 aa15.72■□□□□ 0.11
SMCR5-201ENST00000543475 MYOM2P54296 1465 aa15.72■□□□□ 0.11
SMCR5-201ENST00000543475 EXOSC9Q06265 439 aaKnown RBP15.71■□□□□ 0.1
SMCR5-201ENST00000543475 PTMSP20962 102 aa15.7■□□□□ 0.1
SMCR5-201ENST00000543475 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
SMCR5-201ENST00000543475 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
SMCR5-201ENST00000543475 MYO3AQ8NEV4 1616 aa15.7■□□□□ 0.1
SMCR5-201ENST00000543475 RAB3GAP1Q15042 981 aa15.7■□□□□ 0.1
SMCR5-201ENST00000543475 AFAP1Q8N556 730 aa15.7■□□□□ 0.1
SMCR5-201ENST00000543475 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
SMCR5-201ENST00000543475 KIF1BO60333 1816 aa15.69■□□□□ 0.1
SMCR5-201ENST00000543475 DEPDC5O75140 1603 aa15.69■□□□□ 0.1
SMCR5-201ENST00000543475 NEURL4Q96JN8 1562 aa15.68■□□□□ 0.1
SMCR5-201ENST00000543475 UGGT1Q9NYU2 1555 aa15.68■□□□□ 0.1
SMCR5-201ENST00000543475 TRAK1Q9UPV9 953 aa15.68■□□□□ 0.1
SMCR5-201ENST00000543475 LNPKQ9C0E8 428 aa15.68■□□□□ 0.1
SMCR5-201ENST00000543475 NOB1Q9ULX3 412 aaKnown RBP15.68■□□□□ 0.1
SMCR5-201ENST00000543475 TPM2P07951 284 aa15.67■□□□□ 0.1
SMCR5-201ENST00000543475 NUCB1Q02818 461 aa15.67■□□□□ 0.1
SMCR5-201ENST00000543475 TMEM57Q8N5G2 664 aa15.67■□□□□ 0.1
SMCR5-201ENST00000543475 FOXD4L1Q9NU39 408 aa15.67■□□□□ 0.1
SMCR5-201ENST00000543475 KIF3BO15066 747 aa15.66■□□□□ 0.1
SMCR5-201ENST00000543475 ZBTB40Q9NUA8 1239 aa15.66■□□□□ 0.1
SMCR5-201ENST00000543475 ZFYVE16Q7Z3T8 1539 aa15.66■□□□□ 0.1
SMCR5-201ENST00000543475 ADGRL1O94910 1474 aa15.66■□□□□ 0.1
SMCR5-201ENST00000543475 CCDC173Q0VFZ6 552 aa15.65■□□□□ 0.1
SMCR5-201ENST00000543475 ANP32BQ92688 251 aaKnown RBP15.65■□□□□ 0.1
SMCR5-201ENST00000543475 GOLGA6L22H0YM25 854 aa15.65■□□□□ 0.1
SMCR5-201ENST00000543475 CHD1LQ86WJ1 897 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms