RNA–Protein interactions for RNA: ENST00000543146.2

CCT2-202, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2 BASIC

Gene CCT2, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-202ENST00000543146 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
CCT2-202ENST00000543146 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
CCT2-202ENST00000543146 AMER1Q5JTC6 1135 aaPredicted RBP22.28■■□□□ 1.16
CCT2-202ENST00000543146 MYBBP1AQ9BQG0 1328 aaKnown RBP22.28■■□□□ 1.16
CCT2-202ENST00000543146 PARD3Q8TEW0 1356 aa22.28■■□□□ 1.16
CCT2-202ENST00000543146 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
CCT2-202ENST00000543146 HNRNPUQ00839 825 aaKnown RBP eCLIP22.23■■□□□ 1.15
CCT2-202ENST00000543146 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
CCT2-202ENST00000543146 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
CCT2-202ENST00000543146 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
CCT2-202ENST00000543146 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
CCT2-202ENST00000543146 MED14O60244 1454 aa22.2■■□□□ 1.14
CCT2-202ENST00000543146 NSD3Q9BZ95 1437 aa22.19■■□□□ 1.14
CCT2-202ENST00000543146 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
CCT2-202ENST00000543146 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
CCT2-202ENST00000543146 AMOTL2Q9Y2J4 779 aa22.19■■□□□ 1.14
CCT2-202ENST00000543146 ANKLE2Q86XL3 938 aa22.18■■□□□ 1.14
CCT2-202ENST00000543146 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
CCT2-202ENST00000543146 PNISRQ8TF01 805 aaKnown RBP22.18■■□□□ 1.14
CCT2-202ENST00000543146 SETD1BQ9UPS6 1966 aaKnown RBP22.17■■□□□ 1.14
CCT2-202ENST00000543146 BRD4O60885 1362 aaPredicted RBP22.17■■□□□ 1.14
CCT2-202ENST00000543146 TECPR2O15040 1411 aa22.17■■□□□ 1.14
CCT2-202ENST00000543146 CABP1Q9NZU7 370 aa22.16■■□□□ 1.14
CCT2-202ENST00000543146 WASLO00401 505 aaPredicted RBP22.15■■□□□ 1.14
CCT2-202ENST00000543146 PPP2R1AP30153 589 aa22.15■■□□□ 1.14
CCT2-202ENST00000543146 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.14
CCT2-202ENST00000543146 NCKAP5LQ9HCH0 1330 aa22.14■■□□□ 1.13
CCT2-202ENST00000543146 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.13
CCT2-202ENST00000543146 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
CCT2-202ENST00000543146 CPS1P31327 1500 aa22.13■■□□□ 1.13
CCT2-202ENST00000543146 ZNF142P52746 1687 aaPredicted RBP22.13■■□□□ 1.13
CCT2-202ENST00000543146 ANKRD36BQ8N2N9 1353 aa22.13■■□□□ 1.13
CCT2-202ENST00000543146 KNDC1Q76NI1 1749 aa22.13■■□□□ 1.13
CCT2-202ENST00000543146 A0A1W2PP64 1363 aa22.12■■□□□ 1.13
CCT2-202ENST00000543146 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
CCT2-202ENST00000543146 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
CCT2-202ENST00000543146 NUTM2FA1L443 756 aa22.12■■□□□ 1.13
CCT2-202ENST00000543146 NPC1L1Q9UHC9 1359 aa22.11■■□□□ 1.13
CCT2-202ENST00000543146 KCNA6P17658 529 aa22.09■■□□□ 1.13
CCT2-202ENST00000543146 GTF3C3Q9Y5Q9 886 aa22.09■■□□□ 1.13
CCT2-202ENST00000543146 CD163L1Q9NR16 1453 aa22.08■■□□□ 1.12
CCT2-202ENST00000543146 MORC1Q86VD1 984 aa22.08■■□□□ 1.12
CCT2-202ENST00000543146 NUDT16Q96DE0 195 aaKnown RBP22.08■■□□□ 1.12
CCT2-202ENST00000543146 TERF2IPQ9NYB0 399 aa22.08■■□□□ 1.12
CCT2-202ENST00000543146 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
CCT2-202ENST00000543146 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.07■■□□□ 1.12
CCT2-202ENST00000543146 RBM33Q96EV2 1170 aaKnown RBP22.06■■□□□ 1.12
CCT2-202ENST00000543146 NINLQ9Y2I6 1382 aa22.06■■□□□ 1.12
CCT2-202ENST00000543146 KDM4FA0A1W2PPD8 638 aa22.05■■□□□ 1.12
CCT2-202ENST00000543146 DIP2AQ14689 1571 aa22.05■■□□□ 1.12
CCT2-202ENST00000543146 HDGFL2Q7Z4V5 671 aaPredicted RBP22.05■■□□□ 1.12
CCT2-202ENST00000543146 PRR36Q9H6K5 1346 aa22.04■■□□□ 1.12
CCT2-202ENST00000543146 GGNBP2Q9H3C7 697 aa22.04■■□□□ 1.12
CCT2-202ENST00000543146 PPIP5K1Q6PFW1 1433 aa22.03■■□□□ 1.12
CCT2-202ENST00000543146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCT2-202ENST00000543146 CCDC61Q9Y6R9 512 aa22.01■■□□□ 1.11
CCT2-202ENST00000543146 NPHP4O75161 1426 aaPredicted RBP22.01■■□□□ 1.11
CCT2-202ENST00000543146 HSPA2P54652 639 aa22.01■■□□□ 1.11
CCT2-202ENST00000543146 PTCH1Q13635 1447 aa22■■□□□ 1.11
CCT2-202ENST00000543146 FYB1O15117 783 aa21.99■■□□□ 1.11
CCT2-202ENST00000543146 XRN1Q8IZH2 1706 aaKnown RBP21.98■■□□□ 1.11
CCT2-202ENST00000543146 SALL2Q9Y467 1007 aaPredicted RBP21.98■■□□□ 1.11
CCT2-202ENST00000543146 ADAMTS8Q9UP79 889 aa21.98■■□□□ 1.11
CCT2-202ENST00000543146 ATP7BP35670 1465 aa21.97■■□□□ 1.11
CCT2-202ENST00000543146 PIK3R4Q99570 1358 aa21.97■■□□□ 1.11
CCT2-202ENST00000543146 USP32Q8NFA0 1604 aa21.97■■□□□ 1.11
CCT2-202ENST00000543146 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
CCT2-202ENST00000543146 ADGRB2O60241 1585 aa21.94■■□□□ 1.1
CCT2-202ENST00000543146 WDR43Q15061 677 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCT2-202ENST00000543146 MTHFSP49914 203 aa21.93■■□□□ 1.1
CCT2-202ENST00000543146 PMFBP1Q8TBY8 1022 aa21.93■■□□□ 1.1
CCT2-202ENST00000543146 CPSF1Q10570 1443 aaKnown RBP21.93■■□□□ 1.1
CCT2-202ENST00000543146 CHD2O14647 1828 aaKnown RBP21.93■■□□□ 1.1
CCT2-202ENST00000543146 FBLN1P23142 703 aa21.92■■□□□ 1.1
CCT2-202ENST00000543146 ZRANB1Q9UGI0 708 aa21.92■■□□□ 1.1
CCT2-202ENST00000543146 NSD2O96028 1365 aa21.92■■□□□ 1.1
CCT2-202ENST00000543146 NME9Q86XW9 330 aa21.91■■□□□ 1.1
CCT2-202ENST00000543146 ACEP12821 1306 aa21.91■■□□□ 1.1
CCT2-202ENST00000543146 CDC42BPGQ6DT37 1551 aa21.89■■□□□ 1.09
CCT2-202ENST00000543146 NKTRP30414 1462 aaKnown RBP21.88■■□□□ 1.09
CCT2-202ENST00000543146 CCDC146Q8IYE0 955 aa21.88■■□□□ 1.09
CCT2-202ENST00000543146 EDC4Q6P2E9 1401 aaKnown RBP21.87■■□□□ 1.09
CCT2-202ENST00000543146 PLEKHG3A1L390 1219 aa21.87■■□□□ 1.09
CCT2-202ENST00000543146 C14orf37Q86TY3 774 aa21.87■■□□□ 1.09
CCT2-202ENST00000543146 RGPD8O14715 1765 aaPredicted RBP21.85■■□□□ 1.09
CCT2-202ENST00000543146 ZNF692Q9BU19 519 aaPredicted RBP21.85■■□□□ 1.09
CCT2-202ENST00000543146 POLR3AO14802 1390 aaPredicted RBP21.85■■□□□ 1.09
CCT2-202ENST00000543146 BLMP54132 1417 aaPredicted RBP21.84■■□□□ 1.09
CCT2-202ENST00000543146 KIF20BQ96Q89 1820 aa21.84■■□□□ 1.09
CCT2-202ENST00000543146 NGDNQ8NEJ9 315 aaKnown RBP21.84■■□□□ 1.09
CCT2-202ENST00000543146 TOPAZ1Q8N9V7 1692 aa21.83■■□□□ 1.09
CCT2-202ENST00000543146 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
CCT2-202ENST00000543146 ITSN1Q15811 1721 aa21.82■■□□□ 1.08
CCT2-202ENST00000543146 NALCNQ8IZF0 1738 aa21.82■■□□□ 1.08
CCT2-202ENST00000543146 PPM1GO15355 546 aaPredicted RBP21.82■■□□□ 1.08
CCT2-202ENST00000543146 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
CCT2-202ENST00000543146 TTC21BQ7Z4L5 1316 aa21.81■■□□□ 1.08
CCT2-202ENST00000543146 MON2Q7Z3U7 1717 aa21.81■■□□□ 1.08
CCT2-202ENST00000543146 CFAP53Q96M91 514 aa21.81■■□□□ 1.08
CCT2-202ENST00000543146 ANKRD26Q9UPS8 1709 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms