RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 WAPLQ7Z5K2 1190 aa15.01□□□□□ -0.01
SCG3-202ENST00000542355 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
SCG3-202ENST00000542355 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
SCG3-202ENST00000542355 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
SCG3-202ENST00000542355 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
SCG3-202ENST00000542355 CABP2Q9NPB3 220 aa15□□□□□ -0.01
SCG3-202ENST00000542355 QRICH2Q9H0J4 1663 aa14.99□□□□□ -0.01
SCG3-202ENST00000542355 ABCC11Q96J66 1382 aa14.99□□□□□ -0.01
SCG3-202ENST00000542355 PLEKHG1Q9ULL1 1385 aa14.99□□□□□ -0.01
SCG3-202ENST00000542355 ARHGEF28Q8N1W1 1705 aaKnown RBP14.99□□□□□ -0.01
SCG3-202ENST00000542355 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
SCG3-202ENST00000542355 SLC12A5Q9H2X9 1139 aa14.99□□□□□ -0.01
SCG3-202ENST00000542355 ADAMTSL3P82987 1691 aa14.99□□□□□ -0.01
SCG3-202ENST00000542355 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
SCG3-202ENST00000542355 NRXN3Q9Y4C0 1643 aa14.98□□□□□ -0.01
SCG3-202ENST00000542355 FAM9BQ8IZU0 186 aa14.97□□□□□ -0.01
SCG3-202ENST00000542355 PUS7Q96PZ0 661 aaKnown RBP14.97□□□□□ -0.01
SCG3-202ENST00000542355 MYBBP1AQ9BQG0 1328 aaKnown RBP14.97□□□□□ -0.01
SCG3-202ENST00000542355 ADAMTS13Q76LX8 1427 aa14.97□□□□□ -0.01
SCG3-202ENST00000542355 ARHGAP23Q9P227 1491 aa14.97□□□□□ -0.01
SCG3-202ENST00000542355 SLIT1O75093 1534 aa14.97□□□□□ -0.01
SCG3-202ENST00000542355 CARD14Q9BXL6 1004 aa14.96□□□□□ -0.01
SCG3-202ENST00000542355 PARD3Q8TEW0 1356 aa14.96□□□□□ -0.01
SCG3-202ENST00000542355 PLEKHH1Q9ULM0 1364 aa14.96□□□□□ -0.01
SCG3-202ENST00000542355 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
SCG3-202ENST00000542355 SETD1AO15047 1707 aaKnown RBP14.94□□□□□ -0.02
SCG3-202ENST00000542355 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
SCG3-202ENST00000542355 CEP170BQ9Y4F5 1589 aaPredicted RBP14.93□□□□□ -0.02
SCG3-202ENST00000542355 DLC1Q96QB1 1528 aa14.93□□□□□ -0.02
SCG3-202ENST00000542355 SIRT1Q96EB6 747 aa14.93□□□□□ -0.02
SCG3-202ENST00000542355 TBX22Q9Y458 520 aa14.93□□□□□ -0.02
SCG3-202ENST00000542355 MYOM1P52179 1685 aa14.93□□□□□ -0.02
SCG3-202ENST00000542355 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
SCG3-202ENST00000542355 ANKLE2Q86XL3 938 aa14.92□□□□□ -0.02
SCG3-202ENST00000542355 MED14O60244 1454 aa14.91□□□□□ -0.02
SCG3-202ENST00000542355 HNRNPUQ00839 825 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCG3-202ENST00000542355 BRD4O60885 1362 aaPredicted RBP14.9□□□□□ -0.02
SCG3-202ENST00000542355 AMOTL2Q9Y2J4 779 aa14.9□□□□□ -0.02
SCG3-202ENST00000542355 TECPR2O15040 1411 aa14.9□□□□□ -0.02
SCG3-202ENST00000542355 PNISRQ8TF01 805 aaKnown RBP14.9□□□□□ -0.02
SCG3-202ENST00000542355 ATAD2Q6PL18 1390 aa14.89□□□□□ -0.03
SCG3-202ENST00000542355 ROBO2Q9HCK4 1378 aa14.89□□□□□ -0.03
SCG3-202ENST00000542355 FAM135BQ49AJ0 1406 aa14.89□□□□□ -0.03
SCG3-202ENST00000542355 WASLO00401 505 aaPredicted RBP14.88□□□□□ -0.03
SCG3-202ENST00000542355 NPC1L1Q9UHC9 1359 aa14.88□□□□□ -0.03
SCG3-202ENST00000542355 PTPRUQ92729 1446 aa14.88□□□□□ -0.03
SCG3-202ENST00000542355 NSD3Q9BZ95 1437 aa14.88□□□□□ -0.03
SCG3-202ENST00000542355 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
SCG3-202ENST00000542355 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
SCG3-202ENST00000542355 PPP2R1AP30153 589 aa14.87□□□□□ -0.03
SCG3-202ENST00000542355 ERICH6Q7L0X2 663 aa14.87□□□□□ -0.03
SCG3-202ENST00000542355 NINLQ9Y2I6 1382 aa14.86□□□□□ -0.03
SCG3-202ENST00000542355 TERF2IPQ9NYB0 399 aa14.85□□□□□ -0.03
SCG3-202ENST00000542355 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
SCG3-202ENST00000542355 CPS1P31327 1500 aa14.84□□□□□ -0.03
SCG3-202ENST00000542355 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
SCG3-202ENST00000542355 CGNL1Q0VF96 1302 aa14.84□□□□□ -0.03
SCG3-202ENST00000542355 HDGFL2Q7Z4V5 671 aaPredicted RBP14.83□□□□□ -0.04
SCG3-202ENST00000542355 TMEM132AQ24JP5 1023 aa14.83□□□□□ -0.04
SCG3-202ENST00000542355 MORC1Q86VD1 984 aa14.83□□□□□ -0.04
SCG3-202ENST00000542355 NUDT16Q96DE0 195 aaKnown RBP14.83□□□□□ -0.04
SCG3-202ENST00000542355 KNDC1Q76NI1 1749 aa14.82□□□□□ -0.04
SCG3-202ENST00000542355 KCNA6P17658 529 aa14.82□□□□□ -0.04
SCG3-202ENST00000542355 ZNF142P52746 1687 aaPredicted RBP14.82□□□□□ -0.04
SCG3-202ENST00000542355 NCKAP5LQ9HCH0 1330 aa14.81□□□□□ -0.04
SCG3-202ENST00000542355 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
SCG3-202ENST00000542355 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
SCG3-202ENST00000542355 DIP2AQ14689 1571 aa14.81□□□□□ -0.04
SCG3-202ENST00000542355 NUTM2FA1L443 756 aa14.8□□□□□ -0.04
SCG3-202ENST00000542355 PODXL2Q9NZ53 605 aa14.8□□□□□ -0.04
SCG3-202ENST00000542355 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
SCG3-202ENST00000542355 CD163L1Q9NR16 1453 aa14.8□□□□□ -0.04
SCG3-202ENST00000542355 SCAF1Q9H7N4 1312 aaKnown RBP14.79□□□□□ -0.04
SCG3-202ENST00000542355 KDM4FA0A1W2PPD8 638 aa14.79□□□□□ -0.04
SCG3-202ENST00000542355 SENP3-EIF4A1A0A087X0R7 540 aa14.78□□□□□ -0.04
SCG3-202ENST00000542355 PTCH1Q13635 1447 aa14.78□□□□□ -0.04
SCG3-202ENST00000542355 PPIP5K1Q6PFW1 1433 aa14.78□□□□□ -0.04
SCG3-202ENST00000542355 NPHP4O75161 1426 aaPredicted RBP14.78□□□□□ -0.04
SCG3-202ENST00000542355 PRR36Q9H6K5 1346 aa14.77□□□□□ -0.04
SCG3-202ENST00000542355 GGNBP2Q9H3C7 697 aa14.77□□□□□ -0.04
SCG3-202ENST00000542355 FYB1O15117 783 aa14.77□□□□□ -0.05
SCG3-202ENST00000542355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.76□□□□□ -0.05
SCG3-202ENST00000542355 NSD2O96028 1365 aa14.76□□□□□ -0.05
SCG3-202ENST00000542355 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.76□□□□□ -0.05
SCG3-202ENST00000542355 ZBED9Q6R2W3 1325 aa14.76□□□□□ -0.05
SCG3-202ENST00000542355 RBM33Q96EV2 1170 aaKnown RBP14.75□□□□□ -0.05
SCG3-202ENST00000542355 ADAMTS8Q9UP79 889 aa14.75□□□□□ -0.05
SCG3-202ENST00000542355 ATP7BP35670 1465 aa14.74□□□□□ -0.05
SCG3-202ENST00000542355 WDR43Q15061 677 aaKnown RBP eCLIP14.74□□□□□ -0.05
SCG3-202ENST00000542355 HSPA2P54652 639 aa14.73□□□□□ -0.05
SCG3-202ENST00000542355 CPSF1Q10570 1443 aaKnown RBP14.73□□□□□ -0.05
SCG3-202ENST00000542355 USP32Q8NFA0 1604 aa14.73□□□□□ -0.05
SCG3-202ENST00000542355 MTHFSP49914 203 aa14.73□□□□□ -0.05
SCG3-202ENST00000542355 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
SCG3-202ENST00000542355 XRN1Q8IZH2 1706 aaKnown RBP14.72□□□□□ -0.05
SCG3-202ENST00000542355 ADGRB2O60241 1585 aa14.72□□□□□ -0.05
SCG3-202ENST00000542355 PLEKHG3A1L390 1219 aa14.71□□□□□ -0.05
SCG3-202ENST00000542355 SALL2Q9Y467 1007 aaPredicted RBP14.71□□□□□ -0.05
SCG3-202ENST00000542355 ACEP12821 1306 aa14.71□□□□□ -0.06
SCG3-202ENST00000542355 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms