RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 TULP4Q9NRJ4 1543 aa13.02□□□□□ -0.33
PAAF1-209ENST00000540659 NWD1Q149M9 1564 aa13.02□□□□□ -0.33
PAAF1-209ENST00000540659 FAM9BQ8IZU0 186 aa13.01□□□□□ -0.33
PAAF1-209ENST00000540659 KNDC1Q76NI1 1749 aa13□□□□□ -0.33
PAAF1-209ENST00000540659 PER1O15534 1290 aaPredicted RBP13□□□□□ -0.33
PAAF1-209ENST00000540659 POGKQ9P215 609 aa13□□□□□ -0.33
PAAF1-209ENST00000540659 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
PAAF1-209ENST00000540659 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
PAAF1-209ENST00000540659 RALBP1Q15311 655 aa12.99□□□□□ -0.33
PAAF1-209ENST00000540659 PRAM1Q96QH2 718 aa12.99□□□□□ -0.33
PAAF1-209ENST00000540659 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
PAAF1-209ENST00000540659 EVC2Q86UK5 1308 aa12.98□□□□□ -0.33
PAAF1-209ENST00000540659 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
PAAF1-209ENST00000540659 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
PAAF1-209ENST00000540659 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
PAAF1-209ENST00000540659 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
PAAF1-209ENST00000540659 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
PAAF1-209ENST00000540659 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
PAAF1-209ENST00000540659 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
PAAF1-209ENST00000540659 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
PAAF1-209ENST00000540659 METP08581 1390 aa12.96□□□□□ -0.33
PAAF1-209ENST00000540659 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
PAAF1-209ENST00000540659 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.33
PAAF1-209ENST00000540659 HNRNPUQ00839 825 aaKnown RBP eCLIP12.96□□□□□ -0.33
PAAF1-209ENST00000540659 FBXO41Q8TF61 875 aa12.96□□□□□ -0.33
PAAF1-209ENST00000540659 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.34
PAAF1-209ENST00000540659 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
PAAF1-209ENST00000540659 ILDR1Q86SU0 546 aaPredicted RBP12.95□□□□□ -0.34
PAAF1-209ENST00000540659 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
PAAF1-209ENST00000540659 SCAF1Q9H7N4 1312 aaKnown RBP12.94□□□□□ -0.34
PAAF1-209ENST00000540659 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
PAAF1-209ENST00000540659 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
PAAF1-209ENST00000540659 SLC12A5Q9H2X9 1139 aa12.93□□□□□ -0.34
PAAF1-209ENST00000540659 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-209ENST00000540659 PTPRUQ92729 1446 aa12.92□□□□□ -0.34
PAAF1-209ENST00000540659 NSD3Q9BZ95 1437 aa12.92□□□□□ -0.34
PAAF1-209ENST00000540659 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
PAAF1-209ENST00000540659 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
PAAF1-209ENST00000540659 KCNA6P17658 529 aa12.91□□□□□ -0.34
PAAF1-209ENST00000540659 CARD14Q9BXL6 1004 aa12.91□□□□□ -0.34
PAAF1-209ENST00000540659 ABCC11Q96J66 1382 aa12.91□□□□□ -0.34
PAAF1-209ENST00000540659 PIK3R4Q99570 1358 aa12.91□□□□□ -0.34
PAAF1-209ENST00000540659 AMER1Q5JTC6 1135 aaPredicted RBP12.9□□□□□ -0.34
PAAF1-209ENST00000540659 NLRP13Q86W25 1043 aa12.9□□□□□ -0.34
PAAF1-209ENST00000540659 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
PAAF1-209ENST00000540659 USP32Q8NFA0 1604 aa12.9□□□□□ -0.34
PAAF1-209ENST00000540659 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
PAAF1-209ENST00000540659 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-209ENST00000540659 PUS7Q96PZ0 661 aaKnown RBP12.88□□□□□ -0.35
PAAF1-209ENST00000540659 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 UBAP1LF5GYI3 381 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
PAAF1-209ENST00000540659 KIF20BQ96Q89 1820 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 TECPR2O15040 1411 aa12.87□□□□□ -0.35
PAAF1-209ENST00000540659 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
PAAF1-209ENST00000540659 ITSN1Q15811 1721 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 NPC1L1Q9UHC9 1359 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 PROSER2Q86WR7 435 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-209ENST00000540659 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 RBM33Q96EV2 1170 aaKnown RBP12.85□□□□□ -0.35
PAAF1-209ENST00000540659 NALCNQ8IZF0 1738 aa12.85□□□□□ -0.35
PAAF1-209ENST00000540659 NINLQ9Y2I6 1382 aa12.84□□□□□ -0.35
PAAF1-209ENST00000540659 AMOTL2Q9Y2J4 779 aa12.84□□□□□ -0.35
PAAF1-209ENST00000540659 PTCH1Q13635 1447 aa12.84□□□□□ -0.35
PAAF1-209ENST00000540659 CD163L1Q9NR16 1453 aa12.84□□□□□ -0.35
PAAF1-209ENST00000540659 ADGRB2O60241 1585 aa12.83□□□□□ -0.36
PAAF1-209ENST00000540659 WASLO00401 505 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-209ENST00000540659 TNNT2P45379 298 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-209ENST00000540659 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
PAAF1-209ENST00000540659 MORC1Q86VD1 984 aa12.83□□□□□ -0.36
PAAF1-209ENST00000540659 CABP1Q9NZU7 370 aa12.83□□□□□ -0.36
PAAF1-209ENST00000540659 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
PAAF1-209ENST00000540659 TERF2IPQ9NYB0 399 aa12.82□□□□□ -0.36
PAAF1-209ENST00000540659 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
PAAF1-209ENST00000540659 MSH6P52701 1360 aa12.81□□□□□ -0.36
PAAF1-209ENST00000540659 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
PAAF1-209ENST00000540659 NCOA3Q9Y6Q9 1424 aa12.81□□□□□ -0.36
PAAF1-209ENST00000540659 TOM1O60784 492 aa12.81□□□□□ -0.36
PAAF1-209ENST00000540659 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
PAAF1-209ENST00000540659 TOPAZ1Q8N9V7 1692 aa12.8□□□□□ -0.36
PAAF1-209ENST00000540659 PIP4K2BP78356 416 aa12.8□□□□□ -0.36
PAAF1-209ENST00000540659 ROBO1Q9Y6N7 1651 aa12.8□□□□□ -0.36
PAAF1-209ENST00000540659 MON2Q7Z3U7 1717 aa12.79□□□□□ -0.36
PAAF1-209ENST00000540659 ATP7BP35670 1465 aa12.79□□□□□ -0.36
PAAF1-209ENST00000540659 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-209ENST00000540659 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
PAAF1-209ENST00000540659 NUTM2FA1L443 756 aa12.79□□□□□ -0.36
PAAF1-209ENST00000540659 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
PAAF1-209ENST00000540659 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
PAAF1-209ENST00000540659 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
PAAF1-209ENST00000540659 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
PAAF1-209ENST00000540659 SALL2Q9Y467 1007 aaPredicted RBP12.78□□□□□ -0.36
PAAF1-209ENST00000540659 NSD2O96028 1365 aa12.78□□□□□ -0.36
PAAF1-209ENST00000540659 DCCP43146 1447 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms