RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 PLEKHG1Q9ULL1 1385 aa11.25□□□□□ -0.61
C2CD3-215ENST00000540452 ADAMTSL3P82987 1691 aa11.24□□□□□ -0.61
C2CD3-215ENST00000540452 AMER1Q5JTC6 1135 aaPredicted RBP11.24□□□□□ -0.61
C2CD3-215ENST00000540452 TMC1Q8TDI8 760 aa11.24□□□□□ -0.61
C2CD3-215ENST00000540452 SETD1BQ9UPS6 1966 aaKnown RBP11.24□□□□□ -0.61
C2CD3-215ENST00000540452 PNISRQ8TF01 805 aaKnown RBP11.23□□□□□ -0.61
C2CD3-215ENST00000540452 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
C2CD3-215ENST00000540452 SCAF1Q9H7N4 1312 aaKnown RBP11.23□□□□□ -0.61
C2CD3-215ENST00000540452 ANKRD36BQ8N2N9 1353 aa11.23□□□□□ -0.61
C2CD3-215ENST00000540452 MED14O60244 1454 aa11.23□□□□□ -0.61
C2CD3-215ENST00000540452 ADGRB2O60241 1585 aa11.23□□□□□ -0.61
C2CD3-215ENST00000540452 MLECQ14165 292 aa11.22□□□□□ -0.61
C2CD3-215ENST00000540452 CERKQ8TCT0 537 aa11.22□□□□□ -0.61
C2CD3-215ENST00000540452 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
C2CD3-215ENST00000540452 GTF3C3Q9Y5Q9 886 aa11.21□□□□□ -0.61
C2CD3-215ENST00000540452 HNRNPUQ00839 825 aaKnown RBP eCLIP11.2□□□□□ -0.62
C2CD3-215ENST00000540452 TMEM132EQ6IEE7 984 aa11.2□□□□□ -0.62
C2CD3-215ENST00000540452 CEP170BQ9Y4F5 1589 aaPredicted RBP11.2□□□□□ -0.62
C2CD3-215ENST00000540452 ATP7BP35670 1465 aa11.19□□□□□ -0.62
C2CD3-215ENST00000540452 PIK3R4Q99570 1358 aa11.19□□□□□ -0.62
C2CD3-215ENST00000540452 THEMISQ8N1K5 641 aaPredicted RBP11.19□□□□□ -0.62
C2CD3-215ENST00000540452 NGEFQ8N5V2 710 aa11.19□□□□□ -0.62
C2CD3-215ENST00000540452 BLMP54132 1417 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-215ENST00000540452 CGNL1Q0VF96 1302 aa11.18□□□□□ -0.62
C2CD3-215ENST00000540452 CCDC184Q52MB2 194 aa11.18□□□□□ -0.62
C2CD3-215ENST00000540452 EID1Q9Y6B2 187 aa11.18□□□□□ -0.62
C2CD3-215ENST00000540452 PTCH1Q13635 1447 aa11.18□□□□□ -0.62
C2CD3-215ENST00000540452 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
C2CD3-215ENST00000540452 RIMS1Q86UR5 1692 aaKnown RBP11.17□□□□□ -0.62
C2CD3-215ENST00000540452 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
C2CD3-215ENST00000540452 PDE3BQ13370 1112 aa11.16□□□□□ -0.62
C2CD3-215ENST00000540452 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
C2CD3-215ENST00000540452 FAM9BQ8IZU0 186 aa11.16□□□□□ -0.62
C2CD3-215ENST00000540452 NSD3Q9BZ95 1437 aa11.16□□□□□ -0.62
C2CD3-215ENST00000540452 PRAM1Q96QH2 718 aa11.15□□□□□ -0.62
C2CD3-215ENST00000540452 TERF2IPQ9NYB0 399 aa11.15□□□□□ -0.62
C2CD3-215ENST00000540452 POGKQ9P215 609 aa11.15□□□□□ -0.62
C2CD3-215ENST00000540452 TBX22Q9Y458 520 aa11.15□□□□□ -0.62
C2CD3-215ENST00000540452 SMG6Q86US8 1419 aaKnown RBP11.15□□□□□ -0.62
C2CD3-215ENST00000540452 XRN1Q8IZH2 1706 aaKnown RBP11.15□□□□□ -0.63
C2CD3-215ENST00000540452 KIF20BQ96Q89 1820 aa11.14□□□□□ -0.63
C2CD3-215ENST00000540452 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
C2CD3-215ENST00000540452 CDC42BPGQ6DT37 1551 aa11.13□□□□□ -0.63
C2CD3-215ENST00000540452 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
C2CD3-215ENST00000540452 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
C2CD3-215ENST00000540452 NUTM2DQ5VT03 806 aaPredicted RBP11.13□□□□□ -0.63
C2CD3-215ENST00000540452 CARD14Q9BXL6 1004 aa11.13□□□□□ -0.63
C2CD3-215ENST00000540452 METP08581 1390 aa11.13□□□□□ -0.63
C2CD3-215ENST00000540452 ITSN1Q15811 1721 aa11.12□□□□□ -0.63
C2CD3-215ENST00000540452 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
C2CD3-215ENST00000540452 AKAP12Q02952 1782 aa11.12□□□□□ -0.63
C2CD3-215ENST00000540452 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
C2CD3-215ENST00000540452 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
C2CD3-215ENST00000540452 CPSF1Q10570 1443 aaKnown RBP11.11□□□□□ -0.63
C2CD3-215ENST00000540452 NEFLP07196 543 aa11.11□□□□□ -0.63
C2CD3-215ENST00000540452 HDGFL2Q7Z4V5 671 aaPredicted RBP11.11□□□□□ -0.63
C2CD3-215ENST00000540452 A0A1W2PP64 1363 aa11.11□□□□□ -0.63
C2CD3-215ENST00000540452 EDC4Q6P2E9 1401 aaKnown RBP11.1□□□□□ -0.63
C2CD3-215ENST00000540452 SRPK2P78362 688 aaKnown RBP11.1□□□□□ -0.63
C2CD3-215ENST00000540452 TXNDC2Q86VQ3 553 aa11.1□□□□□ -0.63
C2CD3-215ENST00000540452 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
C2CD3-215ENST00000540452 SLC12A5Q9H2X9 1139 aa11.09□□□□□ -0.63
C2CD3-215ENST00000540452 STK26Q9P289 416 aa11.09□□□□□ -0.63
C2CD3-215ENST00000540452 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
C2CD3-215ENST00000540452 CHD2O14647 1828 aaKnown RBP11.08□□□□□ -0.64
C2CD3-215ENST00000540452 LTKP29376 864 aa11.08□□□□□ -0.64
C2CD3-215ENST00000540452 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
C2CD3-215ENST00000540452 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
C2CD3-215ENST00000540452 NUDCQ9Y266 331 aa11.08□□□□□ -0.64
C2CD3-215ENST00000540452 DMRT2Q9Y5R5 561 aa11.08□□□□□ -0.64
C2CD3-215ENST00000540452 MINK1Q8N4C8 1332 aaPredicted RBP11.08□□□□□ -0.64
C2CD3-215ENST00000540452 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.07□□□□□ -0.64
C2CD3-215ENST00000540452 MORC1Q86VD1 984 aa11.07□□□□□ -0.64
C2CD3-215ENST00000540452 ZNF692Q9BU19 519 aaPredicted RBP11.07□□□□□ -0.64
C2CD3-215ENST00000540452 CABP2Q9NPB3 220 aa11.07□□□□□ -0.64
C2CD3-215ENST00000540452 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
C2CD3-215ENST00000540452 ROBO2Q9HCK4 1378 aa11.06□□□□□ -0.64
C2CD3-215ENST00000540452 LRRC7Q96NW7 1537 aa11.06□□□□□ -0.64
C2CD3-215ENST00000540452 CEBPAP49715 358 aaPredicted RBP11.06□□□□□ -0.64
C2CD3-215ENST00000540452 PELP1Q8IZL8 1130 aaKnown RBP11.06□□□□□ -0.64
C2CD3-215ENST00000540452 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
C2CD3-215ENST00000540452 CCDC61Q9Y6R9 512 aa11.06□□□□□ -0.64
C2CD3-215ENST00000540452 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
C2CD3-215ENST00000540452 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
C2CD3-215ENST00000540452 PLEKHH1Q9ULM0 1364 aa11.05□□□□□ -0.64
C2CD3-215ENST00000540452 PPIP5K1Q6PFW1 1433 aa11.05□□□□□ -0.64
C2CD3-215ENST00000540452 PTPRUQ92729 1446 aa11.05□□□□□ -0.64
C2CD3-215ENST00000540452 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
C2CD3-215ENST00000540452 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
C2CD3-215ENST00000540452 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
C2CD3-215ENST00000540452 USP54Q70EL1 1684 aa11.04□□□□□ -0.64
C2CD3-215ENST00000540452 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
C2CD3-215ENST00000540452 PNPLA6Q8IY17 1366 aa11.03□□□□□ -0.64
C2CD3-215ENST00000540452 PLEKHG3A1L390 1219 aa11.03□□□□□ -0.64
C2CD3-215ENST00000540452 FMN2Q9NZ56 1722 aa11.03□□□□□ -0.64
C2CD3-215ENST00000540452 SAFB2Q14151 953 aaKnown RBP eCLIP11.02□□□□□ -0.65
C2CD3-215ENST00000540452 WAPLQ7Z5K2 1190 aa11.02□□□□□ -0.65
C2CD3-215ENST00000540452 BCANQ96GW7 911 aa11.02□□□□□ -0.65
C2CD3-215ENST00000540452 NALCNQ8IZF0 1738 aa11.01□□□□□ -0.65
C2CD3-215ENST00000540452 FYB1O15117 783 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms