RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 HFM1A2PYH4 1435 aa12.55□□□□□ -0.4
LDHA-218ENST00000540430 NAIPQ13075 1403 aa12.55□□□□□ -0.4
LDHA-218ENST00000540430 SMG6Q86US8 1419 aaKnown RBP12.55□□□□□ -0.4
LDHA-218ENST00000540430 SETBP1Q9Y6X0 1596 aa12.55□□□□□ -0.4
LDHA-218ENST00000540430 AMOTL2Q9Y2J4 779 aa12.55□□□□□ -0.4
LDHA-218ENST00000540430 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
LDHA-218ENST00000540430 NRXN3Q9Y4C0 1643 aa12.54□□□□□ -0.4
LDHA-218ENST00000540430 ZNF326Q5BKZ1 582 aaKnown RBP12.54□□□□□ -0.4
LDHA-218ENST00000540430 PTPRUQ92729 1446 aa12.54□□□□□ -0.4
LDHA-218ENST00000540430 ATF3P18847 181 aa12.54□□□□□ -0.4
LDHA-218ENST00000540430 JCADQ9P266 1359 aa12.53□□□□□ -0.4
LDHA-218ENST00000540430 PKNOX2Q96KN3 472 aa12.53□□□□□ -0.4
LDHA-218ENST00000540430 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
LDHA-218ENST00000540430 CLTCL1P53675 1640 aa12.53□□□□□ -0.4
LDHA-218ENST00000540430 COL16A1Q07092 1604 aaPredicted RBP12.52□□□□□ -0.41
LDHA-218ENST00000540430 XRN1Q8IZH2 1706 aaKnown RBP12.52□□□□□ -0.41
LDHA-218ENST00000540430 DCCP43146 1447 aa12.52□□□□□ -0.41
LDHA-218ENST00000540430 NEXMIFQ5QGS0 1516 aa12.51□□□□□ -0.41
LDHA-218ENST00000540430 KIF1BO60333 1816 aa12.51□□□□□ -0.41
LDHA-218ENST00000540430 AHDC1Q5TGY3 1603 aaPredicted RBP12.5□□□□□ -0.41
LDHA-218ENST00000540430 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
LDHA-218ENST00000540430 METP08581 1390 aa12.49□□□□□ -0.41
LDHA-218ENST00000540430 EIF4G2P78344 907 aaKnown RBP eCLIP12.49□□□□□ -0.41
LDHA-218ENST00000540430 CCDC184Q52MB2 194 aa12.49□□□□□ -0.41
LDHA-218ENST00000540430 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
LDHA-218ENST00000540430 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
LDHA-218ENST00000540430 SPATA31A6Q5VVP1 1343 aa12.48□□□□□ -0.41
LDHA-218ENST00000540430 PPM1GO15355 546 aaPredicted RBP12.48□□□□□ -0.41
LDHA-218ENST00000540430 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
LDHA-218ENST00000540430 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
LDHA-218ENST00000540430 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
LDHA-218ENST00000540430 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
LDHA-218ENST00000540430 CCDC7Q96M83 1385 aa12.46□□□□□ -0.41
LDHA-218ENST00000540430 SHPRHQ149N8 1683 aa12.46□□□□□ -0.41
LDHA-218ENST00000540430 VGFO15240 615 aaPredicted RBP12.46□□□□□ -0.41
LDHA-218ENST00000540430 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
LDHA-218ENST00000540430 MST1RQ04912 1400 aa12.45□□□□□ -0.42
LDHA-218ENST00000540430 ADGRL3Q9HAR2 1447 aa12.45□□□□□ -0.42
LDHA-218ENST00000540430 RPGRIP1LQ68CZ1 1315 aa12.45□□□□□ -0.42
LDHA-218ENST00000540430 ASXL1Q8IXJ9 1541 aa12.45□□□□□ -0.42
LDHA-218ENST00000540430 LRP6O75581 1613 aa12.44□□□□□ -0.42
LDHA-218ENST00000540430 NEFMP07197 916 aa12.44□□□□□ -0.42
LDHA-218ENST00000540430 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
LDHA-218ENST00000540430 PTCH1Q13635 1447 aa12.43□□□□□ -0.42
LDHA-218ENST00000540430 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
LDHA-218ENST00000540430 NALCNQ8IZF0 1738 aa12.42□□□□□ -0.42
LDHA-218ENST00000540430 NHSL1Q5SYE7 1610 aa12.42□□□□□ -0.42
LDHA-218ENST00000540430 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
LDHA-218ENST00000540430 PRAG1Q86YV5 1406 aa12.42□□□□□ -0.42
LDHA-218ENST00000540430 PPLO60437 1756 aa12.41□□□□□ -0.42
LDHA-218ENST00000540430 ZNF772Q68DY9 489 aaPredicted RBP12.41□□□□□ -0.42
LDHA-218ENST00000540430 MS4A1P11836 297 aa12.4□□□□□ -0.42
LDHA-218ENST00000540430 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
LDHA-218ENST00000540430 LRRC59Q96AG4 307 aaKnown RBP12.39□□□□□ -0.43
LDHA-218ENST00000540430 ROBO2Q9HCK4 1378 aa12.39□□□□□ -0.43
LDHA-218ENST00000540430 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
LDHA-218ENST00000540430 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
LDHA-218ENST00000540430 FOXD1Q16676 465 aa12.38□□□□□ -0.43
LDHA-218ENST00000540430 GSE1Q14687 1217 aa12.37□□□□□ -0.43
LDHA-218ENST00000540430 NUTM2BA6NNL0 878 aaPredicted RBP12.37□□□□□ -0.43
LDHA-218ENST00000540430 NUTM2EB1AL46 878 aaPredicted RBP12.37□□□□□ -0.43
LDHA-218ENST00000540430 NUTM2AQ8IVF1 878 aaPredicted RBP12.37□□□□□ -0.43
LDHA-218ENST00000540430 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
LDHA-218ENST00000540430 SPATA31E1Q6ZUB1 1445 aa12.36□□□□□ -0.43
LDHA-218ENST00000540430 LAMC1P11047 1609 aa12.36□□□□□ -0.43
LDHA-218ENST00000540430 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
LDHA-218ENST00000540430 MPHOSPH9Q99550 1183 aa12.36□□□□□ -0.43
LDHA-218ENST00000540430 PDE4AP27815 886 aa12.36□□□□□ -0.43
LDHA-218ENST00000540430 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
LDHA-218ENST00000540430 PNPLA6Q8IY17 1366 aa12.35□□□□□ -0.43
LDHA-218ENST00000540430 ANKRD30BQ9BXX2 1392 aa12.35□□□□□ -0.43
LDHA-218ENST00000540430 RSPH6AQ9H0K4 717 aa12.34□□□□□ -0.43
LDHA-218ENST00000540430 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
LDHA-218ENST00000540430 ADGRF5Q8IZF2 1346 aa12.34□□□□□ -0.43
LDHA-218ENST00000540430 IFT172Q9UG01 1749 aa12.33□□□□□ -0.43
LDHA-218ENST00000540430 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 ORAI2Q96SN7 254 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 DAXXQ9UER7 740 aaPredicted RBP12.33□□□□□ -0.44
LDHA-218ENST00000540430 AFF2P51816 1311 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 SOS2Q07890 1332 aaPredicted RBP12.33□□□□□ -0.44
LDHA-218ENST00000540430 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 CDC42BPGQ6DT37 1551 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 RXRBP28702 533 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 TECPR2O15040 1411 aa12.33□□□□□ -0.44
LDHA-218ENST00000540430 CDK12Q9NYV4 1490 aaPredicted RBP12.32□□□□□ -0.44
LDHA-218ENST00000540430 BRPF3Q9ULD4 1205 aa12.31□□□□□ -0.44
LDHA-218ENST00000540430 PIK3C2GO75747 1445 aa12.31□□□□□ -0.44
LDHA-218ENST00000540430 LRPPRCP42704 1394 aaKnown RBP12.31□□□□□ -0.44
LDHA-218ENST00000540430 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
LDHA-218ENST00000540430 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
LDHA-218ENST00000540430 ABCC11Q96J66 1382 aa12.3□□□□□ -0.44
LDHA-218ENST00000540430 L3MBTL2Q969R5 705 aa12.3□□□□□ -0.44
LDHA-218ENST00000540430 KNDC1Q76NI1 1749 aa12.29□□□□□ -0.44
LDHA-218ENST00000540430 RRP1P56182 461 aaKnown RBP12.29□□□□□ -0.44
LDHA-218ENST00000540430 FAM43AQ8N2R8 423 aa12.29□□□□□ -0.44
LDHA-218ENST00000540430 STK26Q9P289 416 aa12.29□□□□□ -0.44
LDHA-218ENST00000540430 NPHP3Q7Z494 1330 aa12.28□□□□□ -0.44
LDHA-218ENST00000540430 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
LDHA-218ENST00000540430 WAPLQ7Z5K2 1190 aa12.28□□□□□ -0.44
LDHA-218ENST00000540430 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■□□□ 13.1
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms