RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 EIF5BO60841 1220 aaKnown RBP14.35□□□□□ -0.11
CPT1A-206ENST00000540367 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
CPT1A-206ENST00000540367 UPF2Q9HAU5 1272 aaKnown RBP14.35□□□□□ -0.11
CPT1A-206ENST00000540367 CARD14Q9BXL6 1004 aa14.34□□□□□ -0.11
CPT1A-206ENST00000540367 MYO3AQ8NEV4 1616 aa14.34□□□□□ -0.11
CPT1A-206ENST00000540367 MYOM2P54296 1465 aa14.34□□□□□ -0.11
CPT1A-206ENST00000540367 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
CPT1A-206ENST00000540367 ZFYVE16Q7Z3T8 1539 aa14.34□□□□□ -0.11
CPT1A-206ENST00000540367 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
CPT1A-206ENST00000540367 CFAP70Q5T0N1 1121 aa14.34□□□□□ -0.11
CPT1A-206ENST00000540367 ADGRL1O94910 1474 aa14.33□□□□□ -0.11
CPT1A-206ENST00000540367 UGGT1Q9NYU2 1555 aa14.33□□□□□ -0.11
CPT1A-206ENST00000540367 RARSP54136 660 aaKnown RBP14.33□□□□□ -0.12
CPT1A-206ENST00000540367 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
CPT1A-206ENST00000540367 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
CPT1A-206ENST00000540367 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
CPT1A-206ENST00000540367 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
CPT1A-206ENST00000540367 TBC1D2Q9BYX2 928 aa14.31□□□□□ -0.12
CPT1A-206ENST00000540367 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
CPT1A-206ENST00000540367 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
CPT1A-206ENST00000540367 PDZRN3Q9UPQ7 1066 aa14.31□□□□□ -0.12
CPT1A-206ENST00000540367 IFT172Q9UG01 1749 aa14.31□□□□□ -0.12
CPT1A-206ENST00000540367 NPM1P06748 294 aaKnown RBP eCLIP14.3□□□□□ -0.12
CPT1A-206ENST00000540367 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
CPT1A-206ENST00000540367 RLBP1P12271 317 aa14.3□□□□□ -0.12
CPT1A-206ENST00000540367 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
CPT1A-206ENST00000540367 ADGRF5Q8IZF2 1346 aa14.29□□□□□ -0.12
CPT1A-206ENST00000540367 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
CPT1A-206ENST00000540367 NEUROD2Q15784 382 aa14.29□□□□□ -0.12
CPT1A-206ENST00000540367 GGT6Q6P531 493 aa14.28□□□□□ -0.12
CPT1A-206ENST00000540367 WDR63Q8IWG1 891 aa14.28□□□□□ -0.12
CPT1A-206ENST00000540367 RWDD1Q9H446 243 aaPredicted RBP14.28□□□□□ -0.12
CPT1A-206ENST00000540367 RRAGDQ9NQL2 400 aaPredicted RBP14.28□□□□□ -0.12
CPT1A-206ENST00000540367 ATP7AQ04656 1500 aa14.28□□□□□ -0.12
CPT1A-206ENST00000540367 ABCA9Q8IUA7 1624 aa14.28□□□□□ -0.12
CPT1A-206ENST00000540367 TNNQ9UQP3 1299 aa14.27□□□□□ -0.12
CPT1A-206ENST00000540367 KIF1BO60333 1816 aa14.27□□□□□ -0.12
CPT1A-206ENST00000540367 KANK1Q14678 1352 aa14.27□□□□□ -0.12
CPT1A-206ENST00000540367 NSD3Q9BZ95 1437 aa14.27□□□□□ -0.13
CPT1A-206ENST00000540367 TCP11L2Q8N4U5 519 aa14.26□□□□□ -0.13
CPT1A-206ENST00000540367 USP32Q8NFA0 1604 aa14.26□□□□□ -0.13
CPT1A-206ENST00000540367 RRP7AQ9Y3A4 280 aaKnown RBP14.26□□□□□ -0.13
CPT1A-206ENST00000540367 ARAP3Q8WWN8 1544 aa14.26□□□□□ -0.13
CPT1A-206ENST00000540367 FSD2A1L4K1 749 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 CCDC27Q2M243 656 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 NRXN1Q9ULB1 1477 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 ZC3H13Q5T200 1668 aaKnown RBP14.25□□□□□ -0.13
CPT1A-206ENST00000540367 MCM4P33991 863 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 CD109Q6YHK3 1445 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
CPT1A-206ENST00000540367 INO80Q9ULG1 1556 aaPredicted RBP14.25□□□□□ -0.13
CPT1A-206ENST00000540367 GOLGA6L3A6NEY3 463 aa14.24□□□□□ -0.13
CPT1A-206ENST00000540367 SETBP1Q9Y6X0 1596 aa14.24□□□□□ -0.13
CPT1A-206ENST00000540367 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
CPT1A-206ENST00000540367 BCL2L13Q9BXK5 485 aa14.24□□□□□ -0.13
CPT1A-206ENST00000540367 CFAP65Q6ZU64 1925 aaKnown RBP14.24□□□□□ -0.13
CPT1A-206ENST00000540367 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
CPT1A-206ENST00000540367 MVPQ14764 893 aaKnown RBP14.23□□□□□ -0.13
CPT1A-206ENST00000540367 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
CPT1A-206ENST00000540367 TMEM132EQ6IEE7 984 aa14.23□□□□□ -0.13
CPT1A-206ENST00000540367 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
CPT1A-206ENST00000540367 MROH1Q8NDA8 1641 aa14.23□□□□□ -0.13
CPT1A-206ENST00000540367 CHMP5Q9NZZ3 219 aa14.22□□□□□ -0.13
CPT1A-206ENST00000540367 ADGRB2O60241 1585 aa14.22□□□□□ -0.13
CPT1A-206ENST00000540367 QRICH2Q9H0J4 1663 aa14.22□□□□□ -0.13
CPT1A-206ENST00000540367 MYH16Q9H6N6 1097 aa14.22□□□□□ -0.13
CPT1A-206ENST00000540367 C22orf23Q9BZE7 217 aa14.21□□□□□ -0.13
CPT1A-206ENST00000540367 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
CPT1A-206ENST00000540367 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
CPT1A-206ENST00000540367 ZKSCAN2Q63HK3 967 aa14.2□□□□□ -0.14
CPT1A-206ENST00000540367 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
CPT1A-206ENST00000540367 SAFB2Q14151 953 aaKnown RBP eCLIP14.19□□□□□ -0.14
CPT1A-206ENST00000540367 CFAP53Q96M91 514 aa14.19□□□□□ -0.14
CPT1A-206ENST00000540367 DZIP1LQ8IYY4 767 aaKnown RBP14.19□□□□□ -0.14
CPT1A-206ENST00000540367 SLC12A5Q9H2X9 1139 aa14.19□□□□□ -0.14
CPT1A-206ENST00000540367 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
CPT1A-206ENST00000540367 CT47B1P0C2W7 299 aaPredicted RBP14.18□□□□□ -0.14
CPT1A-206ENST00000540367 FTSJ3Q8IY81 847 aaKnown RBP14.18□□□□□ -0.14
CPT1A-206ENST00000540367 ARXQ96QS3 562 aa14.18□□□□□ -0.14
CPT1A-206ENST00000540367 TRAK2O60296 914 aa14.18□□□□□ -0.14
CPT1A-206ENST00000540367 MTHFSP49914 203 aa14.18□□□□□ -0.14
CPT1A-206ENST00000540367 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
CPT1A-206ENST00000540367 PANK2Q9BZ23 570 aa14.18□□□□□ -0.14
CPT1A-206ENST00000540367 CLCN1P35523 988 aa14.17□□□□□ -0.14
CPT1A-206ENST00000540367 HDAC1Q13547 482 aaPredicted RBP14.17□□□□□ -0.14
CPT1A-206ENST00000540367 GZF1Q9H116 711 aaPredicted RBP14.17□□□□□ -0.14
CPT1A-206ENST00000540367 NCOA3Q9Y6Q9 1424 aa14.17□□□□□ -0.14
CPT1A-206ENST00000540367 PPRC1Q5VV67 1664 aaKnown RBP14.17□□□□□ -0.14
CPT1A-206ENST00000540367 NOS1P29475 1434 aa14.16□□□□□ -0.14
CPT1A-206ENST00000540367 MRE11P49959 708 aa14.16□□□□□ -0.14
CPT1A-206ENST00000540367 DDX11L8A8MPP1 907 aa14.16□□□□□ -0.14
CPT1A-206ENST00000540367 ADGRB1O14514 1584 aa14.15□□□□□ -0.14
CPT1A-206ENST00000540367 HSCBQ8IWL3 235 aa14.15□□□□□ -0.14
CPT1A-206ENST00000540367 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
CPT1A-206ENST00000540367 PPLO60437 1756 aa14.15□□□□□ -0.14
CPT1A-206ENST00000540367 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
CPT1A-206ENST00000540367 NSD2O96028 1365 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 FRMPD1Q5SYB0 1578 aa14.14□□□□□ -0.15
CPT1A-206ENST00000540367 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms