RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 NLRP7Q8WX94 980 aa13.05□□□□□ -0.32
LINC00943-206ENST00000540250 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
LINC00943-206ENST00000540250 CFTRP13569 1480 aa13.04□□□□□ -0.32
LINC00943-206ENST00000540250 GNPATO15228 680 aa13.04□□□□□ -0.32
LINC00943-206ENST00000540250 DAXXQ9UER7 740 aaPredicted RBP13.04□□□□□ -0.32
LINC00943-206ENST00000540250 GPR37O15354 613 aa13.03□□□□□ -0.32
LINC00943-206ENST00000540250 FUT2Q10981 343 aa13.03□□□□□ -0.32
LINC00943-206ENST00000540250 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
LINC00943-206ENST00000540250 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.33
LINC00943-206ENST00000540250 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
LINC00943-206ENST00000540250 FCF1Q9Y324 198 aaKnown RBP13.01□□□□□ -0.33
LINC00943-206ENST00000540250 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
LINC00943-206ENST00000540250 RPIAP49247 311 aa12.99□□□□□ -0.33
LINC00943-206ENST00000540250 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
LINC00943-206ENST00000540250 FAM160A2Q8N612 972 aaPredicted RBP12.99□□□□□ -0.33
LINC00943-206ENST00000540250 SLC27A5Q9Y2P5 690 aa12.99□□□□□ -0.33
LINC00943-206ENST00000540250 SMYD5Q6GMV2 418 aa12.98□□□□□ -0.33
LINC00943-206ENST00000540250 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
LINC00943-206ENST00000540250 PRDM9Q9NQV7 894 aa12.97□□□□□ -0.33
LINC00943-206ENST00000540250 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.33
LINC00943-206ENST00000540250 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.33
LINC00943-206ENST00000540250 GCGRP47871 477 aa12.96□□□□□ -0.33
LINC00943-206ENST00000540250 PHOX2BQ99453 314 aa12.96□□□□□ -0.33
LINC00943-206ENST00000540250 TOR4AQ9NXH8 423 aa12.94□□□□□ -0.34
LINC00943-206ENST00000540250 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
LINC00943-206ENST00000540250 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
LINC00943-206ENST00000540250 CD2BP2O95400 341 aaKnown RBP12.93□□□□□ -0.34
LINC00943-206ENST00000540250 DACH1Q9UI36 760 aa12.93□□□□□ -0.34
LINC00943-206ENST00000540250 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
LINC00943-206ENST00000540250 SULF1Q8IWU6 871 aa12.92□□□□□ -0.34
LINC00943-206ENST00000540250 BRICD5Q6PL45 260 aa12.91□□□□□ -0.34
LINC00943-206ENST00000540250 CYP4X1Q8N118 509 aa12.91□□□□□ -0.34
LINC00943-206ENST00000540250 CRIPAKQ8N1N5 446 aa12.91□□□□□ -0.34
LINC00943-206ENST00000540250 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
LINC00943-206ENST00000540250 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
LINC00943-206ENST00000540250 AVPP01185 164 aa12.9□□□□□ -0.34
LINC00943-206ENST00000540250 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
LINC00943-206ENST00000540250 TREML4Q6UXN2 200 aa12.88□□□□□ -0.35
LINC00943-206ENST00000540250 NESP48681 1621 aa12.88□□□□□ -0.35
LINC00943-206ENST00000540250 MSS51Q4VC12 460 aa12.87□□□□□ -0.35
LINC00943-206ENST00000540250 LCE2AQ5TA79 106 aaPredicted RBP12.87□□□□□ -0.35
LINC00943-206ENST00000540250 AXIN1O15169 862 aa12.86□□□□□ -0.35
LINC00943-206ENST00000540250 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
LINC00943-206ENST00000540250 CUX1P39880 1505 aa12.85□□□□□ -0.35
LINC00943-206ENST00000540250 GMPR2Q9P2T1 348 aaKnown RBP12.85□□□□□ -0.35
LINC00943-206ENST00000540250 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
LINC00943-206ENST00000540250 GPIHBP1Q8IV16 184 aa12.84□□□□□ -0.35
LINC00943-206ENST00000540250 TTC24A2A3L6 582 aaPredicted RBP12.82□□□□□ -0.36
LINC00943-206ENST00000540250 CTC1Q2NKJ3 1217 aa12.82□□□□□ -0.36
LINC00943-206ENST00000540250 SMCPP49901 116 aaPredicted RBP12.81□□□□□ -0.36
LINC00943-206ENST00000540250 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
LINC00943-206ENST00000540250 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
LINC00943-206ENST00000540250 CEP164Q9UPV0 1460 aa12.79□□□□□ -0.36
LINC00943-206ENST00000540250 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
LINC00943-206ENST00000540250 EEA1Q15075 1411 aa12.79□□□□□ -0.36
LINC00943-206ENST00000540250 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
LINC00943-206ENST00000540250 WNT7AO00755 349 aa12.78□□□□□ -0.36
LINC00943-206ENST00000540250 CD46P15529 392 aa12.78□□□□□ -0.36
LINC00943-206ENST00000540250 TRIM32Q13049 653 aa12.78□□□□□ -0.36
LINC00943-206ENST00000540250 Q3C1V9 767 aa12.78□□□□□ -0.36
LINC00943-206ENST00000540250 DNMBPQ6XZF7 1577 aa12.77□□□□□ -0.36
LINC00943-206ENST00000540250 SMPD1P17405 629 aa12.77□□□□□ -0.37
LINC00943-206ENST00000540250 MMP16P51512 607 aa12.77□□□□□ -0.37
LINC00943-206ENST00000540250 SNIP1Q8TAD8 396 aaKnown RBP12.76□□□□□ -0.37
LINC00943-206ENST00000540250 SOGA1O94964 1423 aa12.76□□□□□ -0.37
LINC00943-206ENST00000540250 FAM9AQ8IZU1 332 aaPredicted RBP12.75□□□□□ -0.37
LINC00943-206ENST00000540250 WFS1O76024 890 aa12.74□□□□□ -0.37
LINC00943-206ENST00000540250 HLA-CQ95604 372 aa12.73□□□□□ -0.37
LINC00943-206ENST00000540250 MRGPRX2Q96LB1 330 aa12.73□□□□□ -0.37
LINC00943-206ENST00000540250 USB1Q9BQ65 265 aaKnown RBP12.73□□□□□ -0.37
LINC00943-206ENST00000540250 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
LINC00943-206ENST00000540250 J3QL48 77 aa12.72□□□□□ -0.37
LINC00943-206ENST00000540250 KDM4AO75164 1064 aa12.72□□□□□ -0.37
LINC00943-206ENST00000540250 DXOO77932 396 aaKnown RBP12.72□□□□□ -0.37
LINC00943-206ENST00000540250 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
LINC00943-206ENST00000540250 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
LINC00943-206ENST00000540250 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
LINC00943-206ENST00000540250 ATP13A2Q9NQ11 1180 aa12.7□□□□□ -0.38
LINC00943-206ENST00000540250 URB2Q14146 1524 aaKnown RBP12.7□□□□□ -0.38
LINC00943-206ENST00000540250 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
LINC00943-206ENST00000540250 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
LINC00943-206ENST00000540250 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
LINC00943-206ENST00000540250 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
LINC00943-206ENST00000540250 SNRPBP14678 240 aaKnown RBP12.67□□□□□ -0.38
LINC00943-206ENST00000540250 SKOR1P84550 965 aa12.66□□□□□ -0.38
LINC00943-206ENST00000540250 HPS1Q92902 700 aa12.66□□□□□ -0.38
LINC00943-206ENST00000540250 KIF21BO75037 1637 aa12.66□□□□□ -0.38
LINC00943-206ENST00000540250 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
LINC00943-206ENST00000540250 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
LINC00943-206ENST00000540250 IRF6O14896 467 aa12.65□□□□□ -0.38
LINC00943-206ENST00000540250 USP46P62068 366 aa12.65□□□□□ -0.38
LINC00943-206ENST00000540250 GUCA2AQ02747 115 aa12.65□□□□□ -0.38
LINC00943-206ENST00000540250 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
LINC00943-206ENST00000540250 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
LINC00943-206ENST00000540250 HOXA2O43364 376 aa12.64□□□□□ -0.39
LINC00943-206ENST00000540250 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
LINC00943-206ENST00000540250 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
LINC00943-206ENST00000540250 TRIM47Q96LD4 638 aa12.62□□□□□ -0.39
LINC00943-206ENST00000540250 CUX2O14529 1486 aa12.61□□□□□ -0.39
LINC00943-206ENST00000540250 LCE2CQ5TA81 110 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms