RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MTHFSP49914 203 aa17.72■□□□□ 0.43
SCNN1A-215ENST00000540037 L1TD1Q5T7N2 865 aaKnown RBP17.72■□□□□ 0.43
SCNN1A-215ENST00000540037 TRAK1Q9UPV9 953 aa17.72■□□□□ 0.43
SCNN1A-215ENST00000540037 MCM4P33991 863 aa17.72■□□□□ 0.43
SCNN1A-215ENST00000540037 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
SCNN1A-215ENST00000540037 SHPRHQ149N8 1683 aa17.71■□□□□ 0.43
SCNN1A-215ENST00000540037 RWDD1Q9H446 243 aaPredicted RBP17.71■□□□□ 0.43
SCNN1A-215ENST00000540037 KIF3BO15066 747 aa17.71■□□□□ 0.43
SCNN1A-215ENST00000540037 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
SCNN1A-215ENST00000540037 GOLGA6L3A6NEY3 463 aa17.7■□□□□ 0.42
SCNN1A-215ENST00000540037 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
SCNN1A-215ENST00000540037 C22orf23Q9BZE7 217 aa17.69■□□□□ 0.42
SCNN1A-215ENST00000540037 ABCA6Q8N139 1617 aa17.69■□□□□ 0.42
SCNN1A-215ENST00000540037 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
SCNN1A-215ENST00000540037 ABCC1P33527 1531 aa17.68■□□□□ 0.42
SCNN1A-215ENST00000540037 IQSEC2Q5JU85 1478 aa17.68■□□□□ 0.42
SCNN1A-215ENST00000540037 FSD2A1L4K1 749 aa17.67■□□□□ 0.42
SCNN1A-215ENST00000540037 CHGAP10645 457 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-215ENST00000540037 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
SCNN1A-215ENST00000540037 WDR63Q8IWG1 891 aa17.67■□□□□ 0.42
SCNN1A-215ENST00000540037 FTSJ3Q8IY81 847 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-215ENST00000540037 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
SCNN1A-215ENST00000540037 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
SCNN1A-215ENST00000540037 TRAK2O60296 914 aa17.66■□□□□ 0.42
SCNN1A-215ENST00000540037 U2AF1L5P0DN76 240 aaPredicted RBP17.66■□□□□ 0.42
SCNN1A-215ENST00000540037 U2AF1Q01081 240 aaKnown RBP eCLIP17.66■□□□□ 0.42
SCNN1A-215ENST00000540037 DZIP1LQ8IYY4 767 aaKnown RBP17.65■□□□□ 0.42
SCNN1A-215ENST00000540037 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
SCNN1A-215ENST00000540037 MAP3K4Q9Y6R4 1608 aa17.64■□□□□ 0.41
SCNN1A-215ENST00000540037 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
SCNN1A-215ENST00000540037 TRIM27P14373 513 aa17.63■□□□□ 0.41
SCNN1A-215ENST00000540037 EXOSC9Q06265 439 aaKnown RBP17.63■□□□□ 0.41
SCNN1A-215ENST00000540037 ZFYVE16Q7Z3T8 1539 aa17.63■□□□□ 0.41
SCNN1A-215ENST00000540037 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
SCNN1A-215ENST00000540037 CHMP5Q9NZZ3 219 aa17.63■□□□□ 0.41
SCNN1A-215ENST00000540037 NAP1L5Q96NT1 182 aaPredicted RBP17.62■□□□□ 0.41
SCNN1A-215ENST00000540037 SMC4Q9NTJ3 1288 aa17.62■□□□□ 0.41
SCNN1A-215ENST00000540037 KIAA1210Q9ULL0 1709 aa17.61■□□□□ 0.41
SCNN1A-215ENST00000540037 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
SCNN1A-215ENST00000540037 TET3O43151 1660 aa17.61■□□□□ 0.41
SCNN1A-215ENST00000540037 AAMPQ13685 434 aa17.61■□□□□ 0.41
SCNN1A-215ENST00000540037 KANK1Q14678 1352 aa17.6■□□□□ 0.41
SCNN1A-215ENST00000540037 NUTM2DQ5VT03 806 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-215ENST00000540037 SSH1Q8WYL5 1049 aa17.6■□□□□ 0.41
SCNN1A-215ENST00000540037 ZNF692Q9BU19 519 aaPredicted RBP17.6■□□□□ 0.41
SCNN1A-215ENST00000540037 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
SCNN1A-215ENST00000540037 NOS1P29475 1434 aa17.6■□□□□ 0.41
SCNN1A-215ENST00000540037 CHD1O14646 1710 aa17.59■□□□□ 0.41
SCNN1A-215ENST00000540037 CCDC27Q2M243 656 aa17.58■□□□□ 0.41
SCNN1A-215ENST00000540037 SHROOM2Q13796 1616 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 PNNQ9H307 717 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 MROH2AA6NES4 1674 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 DEPDC5O75140 1603 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 CFAP53Q96M91 514 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 MYOM2P54296 1465 aa17.58■□□□□ 0.4
SCNN1A-215ENST00000540037 SAFB2Q14151 953 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCNN1A-215ENST00000540037 HSCBQ8IWL3 235 aa17.57■□□□□ 0.4
SCNN1A-215ENST00000540037 TMEM57Q8N5G2 664 aa17.57■□□□□ 0.4
SCNN1A-215ENST00000540037 ZCCHC11Q5TAX3 1644 aaKnown RBP17.57■□□□□ 0.4
SCNN1A-215ENST00000540037 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
SCNN1A-215ENST00000540037 ERBB4Q15303 1308 aa17.56■□□□□ 0.4
SCNN1A-215ENST00000540037 GRPEL1Q9HAV7 217 aa17.56■□□□□ 0.4
SCNN1A-215ENST00000540037 CLCN1P35523 988 aa17.55■□□□□ 0.4
SCNN1A-215ENST00000540037 GAS2L3Q86XJ1 694 aa17.55■□□□□ 0.4
SCNN1A-215ENST00000540037 SBNO2Q9Y2G9 1366 aa17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 HDAC1Q13547 482 aaPredicted RBP17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 TRIM35Q9UPQ4 493 aa17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 CFAP65Q6ZU64 1925 aaKnown RBP17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 MRE11P49959 708 aa17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 CD109Q6YHK3 1445 aa17.54■□□□□ 0.4
SCNN1A-215ENST00000540037 CD2BP2O95400 341 aaKnown RBP17.53■□□□□ 0.4
SCNN1A-215ENST00000540037 TNPO1Q92973 898 aaKnown RBP17.53■□□□□ 0.4
SCNN1A-215ENST00000540037 VWDEQ8N2E2 1590 aa17.53■□□□□ 0.4
SCNN1A-215ENST00000540037 SMC5Q8IY18 1101 aa17.53■□□□□ 0.4
SCNN1A-215ENST00000540037 KIF1BO60333 1816 aa17.53■□□□□ 0.4
SCNN1A-215ENST00000540037 DDIT3P35638 169 aa17.52■□□□□ 0.4
SCNN1A-215ENST00000540037 TMPOP42166 694 aaKnown RBP17.52■□□□□ 0.4
SCNN1A-215ENST00000540037 DDX19BQ9UMR2 479 aa17.52■□□□□ 0.4
SCNN1A-215ENST00000540037 ATP7AQ04656 1500 aa17.52■□□□□ 0.4
SCNN1A-215ENST00000540037 MYO3AQ8NEV4 1616 aa17.52■□□□□ 0.4
SCNN1A-215ENST00000540037 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
SCNN1A-215ENST00000540037 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
SCNN1A-215ENST00000540037 MROH1Q8NDA8 1641 aa17.51■□□□□ 0.39
SCNN1A-215ENST00000540037 PLEKHF1Q96S99 279 aa17.51■□□□□ 0.39
SCNN1A-215ENST00000540037 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
SCNN1A-215ENST00000540037 IFT172Q9UG01 1749 aa17.51■□□□□ 0.39
SCNN1A-215ENST00000540037 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
SCNN1A-215ENST00000540037 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
SCNN1A-215ENST00000540037 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
SCNN1A-215ENST00000540037 DDX11L8A8MPP1 907 aa17.49■□□□□ 0.39
SCNN1A-215ENST00000540037 C1orf115Q9H7X2 142 aa17.49■□□□□ 0.39
SCNN1A-215ENST00000540037 KIF2CQ99661 725 aa17.48■□□□□ 0.39
SCNN1A-215ENST00000540037 HSP90AB1P08238 724 aaKnown RBP17.48■□□□□ 0.39
SCNN1A-215ENST00000540037 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms