RNA–Protein interactions for RNA: ENST00000539994.5

GTF2H3-208, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 4

Gene GTF2H3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-208ENST00000539994 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
GTF2H3-208ENST00000539994 CRIPAKQ8N1N5 446 aa7.74□□□□□ -1.17
GTF2H3-208ENST00000539994 HLA-CQ95604 372 aa7.74□□□□□ -1.17
GTF2H3-208ENST00000539994 SMYD5Q6GMV2 418 aa7.73□□□□□ -1.17
GTF2H3-208ENST00000539994 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
GTF2H3-208ENST00000539994 MSS51Q4VC12 460 aa7.72□□□□□ -1.17
GTF2H3-208ENST00000539994 GMPR2Q9P2T1 348 aaKnown RBP7.72□□□□□ -1.17
GTF2H3-208ENST00000539994 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
GTF2H3-208ENST00000539994 GPIHBP1Q8IV16 184 aa7.71□□□□□ -1.18
GTF2H3-208ENST00000539994 SULF1Q8IWU6 871 aa7.71□□□□□ -1.18
GTF2H3-208ENST00000539994 FBXO41Q8TF61 875 aa7.71□□□□□ -1.18
GTF2H3-208ENST00000539994 CD2BP2O95400 341 aaKnown RBP7.7□□□□□ -1.18
GTF2H3-208ENST00000539994 CD46P15529 392 aa7.7□□□□□ -1.18
GTF2H3-208ENST00000539994 CYP4X1Q8N118 509 aa7.7□□□□□ -1.18
GTF2H3-208ENST00000539994 CC2D2AQ9P2K1 1620 aa7.68□□□□□ -1.18
GTF2H3-208ENST00000539994 SMPD1P17405 629 aa7.68□□□□□ -1.18
GTF2H3-208ENST00000539994 MMP16P51512 607 aa7.68□□□□□ -1.18
GTF2H3-208ENST00000539994 TRIM32Q13049 653 aa7.68□□□□□ -1.18
GTF2H3-208ENST00000539994 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
GTF2H3-208ENST00000539994 J3QL48 77 aa7.67□□□□□ -1.18
GTF2H3-208ENST00000539994 AXIN1O15169 862 aa7.67□□□□□ -1.18
GTF2H3-208ENST00000539994 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
GTF2H3-208ENST00000539994 WNT7AO00755 349 aa7.66□□□□□ -1.18
GTF2H3-208ENST00000539994 GUCA2AQ02747 115 aa7.66□□□□□ -1.18
GTF2H3-208ENST00000539994 MRGPRX2Q96LB1 330 aa7.66□□□□□ -1.18
GTF2H3-208ENST00000539994 C11orf95C9JLR9 678 aaPredicted RBP7.65□□□□□ -1.18
GTF2H3-208ENST00000539994 DXOO77932 396 aaKnown RBP7.65□□□□□ -1.18
GTF2H3-208ENST00000539994 CTC1Q2NKJ3 1217 aa7.65□□□□□ -1.18
GTF2H3-208ENST00000539994 TTC24A2A3L6 582 aaPredicted RBP7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 ZBTB24O43167 697 aaPredicted RBP7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 KDM4AO75164 1064 aa7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 SKOR1P84550 965 aa7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 MDM2Q00987 491 aaPredicted RBP7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 NFX1Q12986 1120 aaKnown RBP7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 MAP2K5Q13163 448 aa7.64□□□□□ -1.19
GTF2H3-208ENST00000539994 IRF6O14896 467 aa7.63□□□□□ -1.19
GTF2H3-208ENST00000539994 SNRPBP14678 240 aaKnown RBP7.63□□□□□ -1.19
GTF2H3-208ENST00000539994 HPS1Q92902 700 aa7.63□□□□□ -1.19
GTF2H3-208ENST00000539994 USB1Q9BQ65 265 aaKnown RBP7.63□□□□□ -1.19
GTF2H3-208ENST00000539994 HOXA2O43364 376 aa7.62□□□□□ -1.19
GTF2H3-208ENST00000539994 Q3C1V9 767 aa7.62□□□□□ -1.19
GTF2H3-208ENST00000539994 GRIPAP1Q4V328 841 aa7.62□□□□□ -1.19
GTF2H3-208ENST00000539994 SNIP1Q8TAD8 396 aaKnown RBP7.62□□□□□ -1.19
GTF2H3-208ENST00000539994 SYMPKQ92797 1274 aaKnown RBP7.62□□□□□ -1.19
GTF2H3-208ENST00000539994 WFS1O76024 890 aa7.61□□□□□ -1.19
GTF2H3-208ENST00000539994 ATP13A2Q9NQ11 1180 aa7.61□□□□□ -1.19
GTF2H3-208ENST00000539994 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
GTF2H3-208ENST00000539994 CCDC102AQ96A19 550 aa7.6□□□□□ -1.19
GTF2H3-208ENST00000539994 REPIN1Q9BWE0 567 aaKnown RBP7.59□□□□□ -1.19
GTF2H3-208ENST00000539994 RC3H1Q5TC82 1133 aaKnown RBP7.58□□□□□ -1.2
GTF2H3-208ENST00000539994 PTCRAQ6ISU1 281 aaPredicted RBP7.58□□□□□ -1.2
GTF2H3-208ENST00000539994 RB1CC1Q8TDY2 1594 aa7.58□□□□□ -1.2
GTF2H3-208ENST00000539994 FAM217BQ9NTX9 383 aaPredicted RBP7.57□□□□□ -1.2
GTF2H3-208ENST00000539994 DISP3Q9P2K9 1392 aa7.57□□□□□ -1.2
GTF2H3-208ENST00000539994 TRIM47Q96LD4 638 aa7.56□□□□□ -1.2
GTF2H3-208ENST00000539994 PCDHGC3Q9UN70 934 aa7.56□□□□□ -1.2
GTF2H3-208ENST00000539994 MINK1Q8N4C8 1332 aaPredicted RBP7.55□□□□□ -1.2
GTF2H3-208ENST00000539994 JUNDP17535 347 aa7.55□□□□□ -1.2
GTF2H3-208ENST00000539994 USP46P62068 366 aa7.55□□□□□ -1.2
GTF2H3-208ENST00000539994 ERCC6Q03468 1493 aa7.55□□□□□ -1.2
GTF2H3-208ENST00000539994 SIAH2O43255 324 aa7.54□□□□□ -1.2
GTF2H3-208ENST00000539994 WIPF1O43516 503 aa7.54□□□□□ -1.2
GTF2H3-208ENST00000539994 WNT7BP56706 349 aa7.54□□□□□ -1.2
GTF2H3-208ENST00000539994 GPCPD1Q9NPB8 672 aa7.54□□□□□ -1.2
GTF2H3-208ENST00000539994 TERTO14746 1132 aaKnown RBP7.53□□□□□ -1.2
GTF2H3-208ENST00000539994 ALDH1A1P00352 501 aa7.52□□□□□ -1.21
GTF2H3-208ENST00000539994 NUDT12Q9BQG2 462 aa7.52□□□□□ -1.21
GTF2H3-208ENST00000539994 BMP1P13497 986 aa7.51□□□□□ -1.21
GTF2H3-208ENST00000539994 TRIM46Q7Z4K8 759 aa7.51□□□□□ -1.21
GTF2H3-208ENST00000539994 RETREG3Q86VR2 466 aa7.51□□□□□ -1.21
GTF2H3-208ENST00000539994 CLCN1P35523 988 aa7.5□□□□□ -1.21
GTF2H3-208ENST00000539994 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
GTF2H3-208ENST00000539994 FDX1P10109 184 aa7.49□□□□□ -1.21
GTF2H3-208ENST00000539994 NDUFV2P19404 249 aa7.49□□□□□ -1.21
GTF2H3-208ENST00000539994 SH3BP2P78314 561 aa7.49□□□□□ -1.21
GTF2H3-208ENST00000539994 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
GTF2H3-208ENST00000539994 SPIRE2Q8WWL2 714 aa7.48□□□□□ -1.21
GTF2H3-208ENST00000539994 TULP1O00294 542 aaPredicted RBP7.47□□□□□ -1.21
GTF2H3-208ENST00000539994 NUTM1Q86Y26 1132 aa7.47□□□□□ -1.21
GTF2H3-208ENST00000539994 EHBP1Q8NDI1 1231 aa7.47□□□□□ -1.21
GTF2H3-208ENST00000539994 MOXD2PA6NHM9 499 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 C6orf229H3BNL8 230 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 CCNYL3P0C7X3 344 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 LORP23490 312 aaPredicted RBP7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 SSTR3P32745 418 aaPredicted RBP7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 LINC01559Q495D7 138 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 STK17AQ9UEE5 414 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 GTF3C3Q9Y5Q9 886 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 TLL2Q9Y6L7 1015 aa7.46□□□□□ -1.22
GTF2H3-208ENST00000539994 MS4A1P11836 297 aa7.45□□□□□ -1.22
GTF2H3-208ENST00000539994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.45□□□□□ -1.22
GTF2H3-208ENST00000539994 KIFC2Q96AC6 838 aa7.45□□□□□ -1.22
GTF2H3-208ENST00000539994 UNC93B1Q9H1C4 597 aa7.45□□□□□ -1.22
GTF2H3-208ENST00000539994 CAPN5O15484 640 aaPredicted RBP7.44□□□□□ -1.22
GTF2H3-208ENST00000539994 VEGFBP49765 207 aa7.44□□□□□ -1.22
GTF2H3-208ENST00000539994 BAP1Q92560 729 aa7.44□□□□□ -1.22
GTF2H3-208ENST00000539994 EVA1BQ9NVM1 165 aa7.44□□□□□ -1.22
GTF2H3-208ENST00000539994 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
GTF2H3-208ENST00000539994 ERCC6L2Q5T890 1561 aa7.42□□□□□ -1.22
GTF2H3-208ENST00000539994 PTPRNQ16849 979 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms