RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
VTN-202ENST00000539746 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
VTN-202ENST00000539746 DISP3Q9P2K9 1392 aa16.09■□□□□ 0.17
VTN-202ENST00000539746 LMTK3Q96Q04 1460 aa16.09■□□□□ 0.17
VTN-202ENST00000539746 RALBP1Q15311 655 aa16.08■□□□□ 0.16
VTN-202ENST00000539746 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
VTN-202ENST00000539746 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
VTN-202ENST00000539746 NPC1L1Q9UHC9 1359 aa16.06■□□□□ 0.16
VTN-202ENST00000539746 WASLO00401 505 aaPredicted RBP16.06■□□□□ 0.16
VTN-202ENST00000539746 XRN1Q8IZH2 1706 aaKnown RBP16.05■□□□□ 0.16
VTN-202ENST00000539746 NSD2O96028 1365 aa16.05■□□□□ 0.16
VTN-202ENST00000539746 MINK1Q8N4C8 1332 aaPredicted RBP16.05■□□□□ 0.16
VTN-202ENST00000539746 ANKARQ7Z5J8 1434 aa16.04■□□□□ 0.16
VTN-202ENST00000539746 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
VTN-202ENST00000539746 TMC1Q8TDI8 760 aa16.04■□□□□ 0.16
VTN-202ENST00000539746 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
VTN-202ENST00000539746 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
VTN-202ENST00000539746 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
VTN-202ENST00000539746 ANKRD36BQ8N2N9 1353 aa16.03■□□□□ 0.16
VTN-202ENST00000539746 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
VTN-202ENST00000539746 CGNL1Q0VF96 1302 aa16.03■□□□□ 0.16
VTN-202ENST00000539746 C11orf95C9JLR9 678 aaPredicted RBP16.03■□□□□ 0.16
VTN-202ENST00000539746 SAFB2Q14151 953 aaKnown RBP eCLIP16.03■□□□□ 0.16
VTN-202ENST00000539746 C14orf37Q86TY3 774 aa16.03■□□□□ 0.16
VTN-202ENST00000539746 CDK19Q9BWU1 502 aa16.03■□□□□ 0.16
VTN-202ENST00000539746 ATP7BP35670 1465 aa16.03■□□□□ 0.16
VTN-202ENST00000539746 BRD4O60885 1362 aaPredicted RBP16.02■□□□□ 0.16
VTN-202ENST00000539746 PANK3Q9H999 370 aa16.01■□□□□ 0.15
VTN-202ENST00000539746 DCCP43146 1447 aa16.01■□□□□ 0.15
VTN-202ENST00000539746 CHD2O14647 1828 aaKnown RBP16.01■□□□□ 0.15
VTN-202ENST00000539746 TULP4Q9NRJ4 1543 aa16■□□□□ 0.15
VTN-202ENST00000539746 WAPLQ7Z5K2 1190 aa16■□□□□ 0.15
VTN-202ENST00000539746 PROSER2Q86WR7 435 aaPredicted RBP15.99■□□□□ 0.15
VTN-202ENST00000539746 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
VTN-202ENST00000539746 PTPRUQ92729 1446 aa15.99■□□□□ 0.15
VTN-202ENST00000539746 ADGRL3Q9HAR2 1447 aa15.99■□□□□ 0.15
VTN-202ENST00000539746 CDC42BPGQ6DT37 1551 aa15.99■□□□□ 0.15
VTN-202ENST00000539746 C19orf44Q9H6X5 657 aa15.97■□□□□ 0.15
VTN-202ENST00000539746 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
VTN-202ENST00000539746 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
VTN-202ENST00000539746 CADPS2Q86UW7 1296 aa15.96■□□□□ 0.15
VTN-202ENST00000539746 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
VTN-202ENST00000539746 MYBBP1AQ9BQG0 1328 aaKnown RBP15.95■□□□□ 0.14
VTN-202ENST00000539746 ITSN1Q15811 1721 aa15.95■□□□□ 0.14
VTN-202ENST00000539746 ATF3P18847 181 aa15.95■□□□□ 0.14
VTN-202ENST00000539746 HSPA2P54652 639 aa15.95■□□□□ 0.14
VTN-202ENST00000539746 MSH6P52701 1360 aa15.95■□□□□ 0.14
VTN-202ENST00000539746 PPIP5K1Q6PFW1 1433 aa15.94■□□□□ 0.14
VTN-202ENST00000539746 AEBP2Q6ZN18 517 aaPredicted RBP15.94■□□□□ 0.14
VTN-202ENST00000539746 PLEKHH1Q9ULM0 1364 aa15.94■□□□□ 0.14
VTN-202ENST00000539746 USP32Q8NFA0 1604 aa15.94■□□□□ 0.14
VTN-202ENST00000539746 PLEKHG3A1L390 1219 aa15.93■□□□□ 0.14
VTN-202ENST00000539746 NLRP13Q86W25 1043 aa15.93■□□□□ 0.14
VTN-202ENST00000539746 MIER1Q8N108 512 aa15.93■□□□□ 0.14
VTN-202ENST00000539746 EDC4Q6P2E9 1401 aaKnown RBP15.93■□□□□ 0.14
VTN-202ENST00000539746 PER1O15534 1290 aaPredicted RBP15.92■□□□□ 0.14
VTN-202ENST00000539746 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
VTN-202ENST00000539746 MYOM1P52179 1685 aa15.91■□□□□ 0.14
VTN-202ENST00000539746 TTC21AQ8NDW8 1320 aa15.91■□□□□ 0.14
VTN-202ENST00000539746 PARD3Q8TEW0 1356 aa15.9■□□□□ 0.14
VTN-202ENST00000539746 SLC12A5Q9H2X9 1139 aa15.9■□□□□ 0.14
VTN-202ENST00000539746 NSD3Q9BZ95 1437 aa15.9■□□□□ 0.14
VTN-202ENST00000539746 NGDNQ8NEJ9 315 aaKnown RBP15.89■□□□□ 0.13
VTN-202ENST00000539746 MORC1Q86VD1 984 aa15.88■□□□□ 0.13
VTN-202ENST00000539746 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
VTN-202ENST00000539746 A0A1W2PP64 1363 aa15.87■□□□□ 0.13
VTN-202ENST00000539746 CPSF1Q10570 1443 aaKnown RBP15.87■□□□□ 0.13
VTN-202ENST00000539746 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
VTN-202ENST00000539746 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
VTN-202ENST00000539746 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.86■□□□□ 0.13
VTN-202ENST00000539746 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
VTN-202ENST00000539746 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
VTN-202ENST00000539746 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
VTN-202ENST00000539746 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
VTN-202ENST00000539746 PSME1Q06323 249 aa15.85■□□□□ 0.13
VTN-202ENST00000539746 MRS2Q9HD23 443 aa15.85■□□□□ 0.13
VTN-202ENST00000539746 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
VTN-202ENST00000539746 COG3Q96JB2 828 aa15.84■□□□□ 0.13
VTN-202ENST00000539746 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
VTN-202ENST00000539746 KIF1AQ12756 1690 aa15.83■□□□□ 0.13
VTN-202ENST00000539746 TOPAZ1Q8N9V7 1692 aa15.83■□□□□ 0.13
VTN-202ENST00000539746 CENPBP07199 599 aaPredicted RBP15.83■□□□□ 0.12
VTN-202ENST00000539746 INSRP06213 1382 aa15.83■□□□□ 0.12
VTN-202ENST00000539746 ACEP12821 1306 aa15.82■□□□□ 0.12
VTN-202ENST00000539746 NALCNQ8IZF0 1738 aa15.82■□□□□ 0.12
VTN-202ENST00000539746 USP6P35125 1406 aa15.81■□□□□ 0.12
VTN-202ENST00000539746 PNNQ9H307 717 aaKnown RBP15.81■□□□□ 0.12
VTN-202ENST00000539746 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
VTN-202ENST00000539746 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
VTN-202ENST00000539746 CARD14Q9BXL6 1004 aa15.8■□□□□ 0.12
VTN-202ENST00000539746 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
VTN-202ENST00000539746 LRRC7Q96NW7 1537 aa15.78■□□□□ 0.12
VTN-202ENST00000539746 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
VTN-202ENST00000539746 WDR43Q15061 677 aaKnown RBP eCLIP15.78■□□□□ 0.12
VTN-202ENST00000539746 C1orf167Q5SNV9 1468 aa15.78■□□□□ 0.12
VTN-202ENST00000539746 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
VTN-202ENST00000539746 TTC21BQ7Z4L5 1316 aa15.77■□□□□ 0.12
VTN-202ENST00000539746 NGEFQ8N5V2 710 aa15.77■□□□□ 0.12
VTN-202ENST00000539746 MON2Q7Z3U7 1717 aa15.77■□□□□ 0.11
VTN-202ENST00000539746 AATKQ6ZMQ8 1374 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms