RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 NWD1Q149M9 1564 aa24.79■■□□□ 1.56
COPS7A-210ENST00000539735 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
COPS7A-210ENST00000539735 FAM9BQ8IZU0 186 aa24.78■■□□□ 1.56
COPS7A-210ENST00000539735 CHD2O14647 1828 aaKnown RBP24.78■■□□□ 1.56
COPS7A-210ENST00000539735 KTN1Q86UP2 1357 aaKnown RBP24.77■■□□□ 1.56
COPS7A-210ENST00000539735 DISP3Q9P2K9 1392 aa24.77■■□□□ 1.56
COPS7A-210ENST00000539735 TSHZ2Q9NRE2 1034 aa24.76■■□□□ 1.55
COPS7A-210ENST00000539735 TMF1P82094 1093 aa24.75■■□□□ 1.55
COPS7A-210ENST00000539735 SETD1AO15047 1707 aaKnown RBP24.75■■□□□ 1.55
COPS7A-210ENST00000539735 LRPPRCP42704 1394 aaKnown RBP24.75■■□□□ 1.55
COPS7A-210ENST00000539735 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
COPS7A-210ENST00000539735 CNGB1Q14028 1251 aaPredicted RBP24.74■■□□□ 1.55
COPS7A-210ENST00000539735 ROBO2Q9HCK4 1378 aa24.73■■□□□ 1.55
COPS7A-210ENST00000539735 ERICH6BQ5W0A0 696 aa24.72■■□□□ 1.55
COPS7A-210ENST00000539735 ABCC11Q96J66 1382 aa24.72■■□□□ 1.55
COPS7A-210ENST00000539735 ASXL1Q8IXJ9 1541 aa24.72■■□□□ 1.55
COPS7A-210ENST00000539735 IQSEC2Q5JU85 1478 aa24.71■■□□□ 1.55
COPS7A-210ENST00000539735 TRAK1Q9UPV9 953 aa24.71■■□□□ 1.55
COPS7A-210ENST00000539735 UBAP1LF5GYI3 381 aa24.7■■□□□ 1.55
COPS7A-210ENST00000539735 XRN1Q8IZH2 1706 aaKnown RBP24.7■■□□□ 1.55
COPS7A-210ENST00000539735 EIF3AQ14152 1382 aaKnown RBP24.69■■□□□ 1.54
COPS7A-210ENST00000539735 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
COPS7A-210ENST00000539735 WAPLQ7Z5K2 1190 aa24.69■■□□□ 1.54
COPS7A-210ENST00000539735 MSH6P52701 1360 aa24.68■■□□□ 1.54
COPS7A-210ENST00000539735 ADGRB1O14514 1584 aa24.68■■□□□ 1.54
COPS7A-210ENST00000539735 TOM1O60784 492 aa24.68■■□□□ 1.54
COPS7A-210ENST00000539735 C19orf44Q9H6X5 657 aa24.67■■□□□ 1.54
COPS7A-210ENST00000539735 NCOA3Q9Y6Q9 1424 aa24.67■■□□□ 1.54
COPS7A-210ENST00000539735 TECPR2O15040 1411 aa24.66■■□□□ 1.54
COPS7A-210ENST00000539735 RALBP1Q15311 655 aa24.65■■□□□ 1.54
COPS7A-210ENST00000539735 PRAM1Q96QH2 718 aa24.65■■□□□ 1.54
COPS7A-210ENST00000539735 POGKQ9P215 609 aa24.65■■□□□ 1.54
COPS7A-210ENST00000539735 SAFB2Q14151 953 aaKnown RBP eCLIP24.64■■□□□ 1.54
COPS7A-210ENST00000539735 FBXO41Q8TF61 875 aa24.64■■□□□ 1.54
COPS7A-210ENST00000539735 SIRT1Q96EB6 747 aa24.63■■□□□ 1.53
COPS7A-210ENST00000539735 ATF3P18847 181 aa24.63■■□□□ 1.53
COPS7A-210ENST00000539735 BRD4O60885 1362 aaPredicted RBP24.62■■□□□ 1.53
COPS7A-210ENST00000539735 PLEKHH1Q9ULM0 1364 aa24.62■■□□□ 1.53
COPS7A-210ENST00000539735 PIP4K2BP78356 416 aa24.62■■□□□ 1.53
COPS7A-210ENST00000539735 MYBBP1AQ9BQG0 1328 aaKnown RBP24.61■■□□□ 1.53
COPS7A-210ENST00000539735 FAM135BQ49AJ0 1406 aa24.6■■□□□ 1.53
COPS7A-210ENST00000539735 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
COPS7A-210ENST00000539735 SMG6Q86US8 1419 aaKnown RBP24.6■■□□□ 1.53
COPS7A-210ENST00000539735 CDCA8Q53HL2 280 aa24.59■■□□□ 1.53
COPS7A-210ENST00000539735 PNISRQ8TF01 805 aaKnown RBP24.59■■□□□ 1.53
COPS7A-210ENST00000539735 XIRP1Q702N8 1843 aaKnown RBP24.58■■□□□ 1.53
COPS7A-210ENST00000539735 PANK3Q9H999 370 aa24.58■■□□□ 1.53
COPS7A-210ENST00000539735 ADGRL3Q9HAR2 1447 aa24.58■■□□□ 1.53
COPS7A-210ENST00000539735 TMC1Q8TDI8 760 aa24.58■■□□□ 1.53
COPS7A-210ENST00000539735 PER1O15534 1290 aaPredicted RBP24.57■■□□□ 1.52
COPS7A-210ENST00000539735 SLAIN2Q9P270 581 aa24.56■■□□□ 1.52
COPS7A-210ENST00000539735 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
COPS7A-210ENST00000539735 PARD3Q8TEW0 1356 aa24.55■■□□□ 1.52
COPS7A-210ENST00000539735 KNDC1Q76NI1 1749 aa24.54■■□□□ 1.52
COPS7A-210ENST00000539735 SLC24A1O60721 1099 aa24.54■■□□□ 1.52
COPS7A-210ENST00000539735 MINK1Q8N4C8 1332 aaPredicted RBP24.52■■□□□ 1.52
COPS7A-210ENST00000539735 DCCP43146 1447 aa24.52■■□□□ 1.52
COPS7A-210ENST00000539735 CENPJQ9HC77 1338 aaPredicted RBP24.52■■□□□ 1.52
COPS7A-210ENST00000539735 ILDR1Q86SU0 546 aaPredicted RBP24.51■■□□□ 1.51
COPS7A-210ENST00000539735 PPP4R2Q9NY27 417 aa24.5■■□□□ 1.51
COPS7A-210ENST00000539735 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.5■■□□□ 1.51
COPS7A-210ENST00000539735 NUTM2FA1L443 756 aa24.49■■□□□ 1.51
COPS7A-210ENST00000539735 IRX6P78412 446 aaPredicted RBP24.49■■□□□ 1.51
COPS7A-210ENST00000539735 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
COPS7A-210ENST00000539735 NUDCQ9Y266 331 aa24.49■■□□□ 1.51
COPS7A-210ENST00000539735 NALCNQ8IZF0 1738 aa24.48■■□□□ 1.51
COPS7A-210ENST00000539735 SBNO2Q9Y2G9 1366 aa24.47■■□□□ 1.51
COPS7A-210ENST00000539735 CC2D1BQ5T0F9 858 aaKnown RBP24.47■■□□□ 1.51
COPS7A-210ENST00000539735 MYOM1P52179 1685 aa24.45■■□□□ 1.5
COPS7A-210ENST00000539735 QRICH2Q9H0J4 1663 aa24.44■■□□□ 1.5
COPS7A-210ENST00000539735 MST1RQ04912 1400 aa24.44■■□□□ 1.5
COPS7A-210ENST00000539735 ARHGEF28Q8N1W1 1705 aaKnown RBP24.43■■□□□ 1.5
COPS7A-210ENST00000539735 INSRP06213 1382 aa24.43■■□□□ 1.5
COPS7A-210ENST00000539735 MYT1Q01538 1121 aa24.42■■□□□ 1.5
COPS7A-210ENST00000539735 KNSTRNQ9Y448 316 aa24.42■■□□□ 1.5
COPS7A-210ENST00000539735 RNF123Q5XPI4 1314 aa24.42■■□□□ 1.5
COPS7A-210ENST00000539735 WASLO00401 505 aaPredicted RBP24.42■■□□□ 1.5
COPS7A-210ENST00000539735 CDC42BPGQ6DT37 1551 aa24.41■■□□□ 1.5
COPS7A-210ENST00000539735 ESCO1Q5FWF5 840 aa24.4■■□□□ 1.5
COPS7A-210ENST00000539735 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
COPS7A-210ENST00000539735 C1orf167Q5SNV9 1468 aa24.4■■□□□ 1.5
COPS7A-210ENST00000539735 ORAI2Q96SN7 254 aa24.4■■□□□ 1.5
COPS7A-210ENST00000539735 CDK19Q9BWU1 502 aa24.38■■□□□ 1.49
COPS7A-210ENST00000539735 HSPA1LP34931 641 aa24.37■■□□□ 1.49
COPS7A-210ENST00000539735 SRPK2P78362 688 aaKnown RBP24.35■■□□□ 1.49
COPS7A-210ENST00000539735 AMER1Q5JTC6 1135 aaPredicted RBP24.35■■□□□ 1.49
COPS7A-210ENST00000539735 RBM19Q9Y4C8 960 aaKnown RBP24.35■■□□□ 1.49
COPS7A-210ENST00000539735 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
COPS7A-210ENST00000539735 ROBO1Q9Y6N7 1651 aa24.33■■□□□ 1.49
COPS7A-210ENST00000539735 EVC2Q86UK5 1308 aa24.32■■□□□ 1.48
COPS7A-210ENST00000539735 DDX17Q92841 729 aaKnown RBP24.31■■□□□ 1.48
COPS7A-210ENST00000539735 CABP2Q9NPB3 220 aa24.31■■□□□ 1.48
COPS7A-210ENST00000539735 NUDT16Q96DE0 195 aaKnown RBP24.31■■□□□ 1.48
COPS7A-210ENST00000539735 PRR36Q9H6K5 1346 aa24.3■■□□□ 1.48
COPS7A-210ENST00000539735 BLMP54132 1417 aaPredicted RBP24.3■■□□□ 1.48
COPS7A-210ENST00000539735 FOXO3O43524 673 aa24.29■■□□□ 1.48
COPS7A-210ENST00000539735 PDE3BQ13370 1112 aa24.29■■□□□ 1.48
COPS7A-210ENST00000539735 ANKARQ7Z5J8 1434 aa24.29■■□□□ 1.48
COPS7A-210ENST00000539735 TULP4Q9NRJ4 1543 aa24.29■■□□□ 1.48
COPS7A-210ENST00000539735 FMN2Q9NZ56 1722 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms