RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
RTN4IP1-204ENST00000539449 LAMC1P11047 1609 aa12.97□□□□□ -0.33
RTN4IP1-204ENST00000539449 DIP2AQ14689 1571 aa12.97□□□□□ -0.33
RTN4IP1-204ENST00000539449 RIMS2Q9UQ26 1411 aa12.96□□□□□ -0.33
RTN4IP1-204ENST00000539449 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
RTN4IP1-204ENST00000539449 GPRASP1Q5JY77 1395 aa12.96□□□□□ -0.33
RTN4IP1-204ENST00000539449 EIF4G2P78344 907 aaKnown RBP eCLIP12.96□□□□□ -0.33
RTN4IP1-204ENST00000539449 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
RTN4IP1-204ENST00000539449 ZFYVE9O95405 1425 aa12.95□□□□□ -0.34
RTN4IP1-204ENST00000539449 USP47Q96K76 1375 aa12.94□□□□□ -0.34
RTN4IP1-204ENST00000539449 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
RTN4IP1-204ENST00000539449 LRP5O75197 1615 aa12.93□□□□□ -0.34
RTN4IP1-204ENST00000539449 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
RTN4IP1-204ENST00000539449 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
RTN4IP1-204ENST00000539449 CHD2O14647 1828 aaKnown RBP12.92□□□□□ -0.34
RTN4IP1-204ENST00000539449 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
RTN4IP1-204ENST00000539449 ASXL1Q8IXJ9 1541 aa12.92□□□□□ -0.34
RTN4IP1-204ENST00000539449 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
RTN4IP1-204ENST00000539449 ADGRB1O14514 1584 aa12.91□□□□□ -0.34
RTN4IP1-204ENST00000539449 EP400Q96L91 3159 aa12.91□□□□□ -0.34
RTN4IP1-204ENST00000539449 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
RTN4IP1-204ENST00000539449 TMEM132EQ6IEE7 984 aa12.91□□□□□ -0.34
RTN4IP1-204ENST00000539449 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
RTN4IP1-204ENST00000539449 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
RTN4IP1-204ENST00000539449 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
RTN4IP1-204ENST00000539449 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
RTN4IP1-204ENST00000539449 CADPS2Q86UW7 1296 aa12.87□□□□□ -0.35
RTN4IP1-204ENST00000539449 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
RTN4IP1-204ENST00000539449 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 DIEXFQ68CQ4 756 aaKnown RBP12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 BRINP3Q76B58 766 aa12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 BCANQ96GW7 911 aa12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 TESK2Q96S53 571 aa12.86□□□□□ -0.35
RTN4IP1-204ENST00000539449 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
RTN4IP1-204ENST00000539449 CCDC7Q96M83 1385 aa12.85□□□□□ -0.35
RTN4IP1-204ENST00000539449 ATF3P18847 181 aa12.85□□□□□ -0.35
RTN4IP1-204ENST00000539449 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
RTN4IP1-204ENST00000539449 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
RTN4IP1-204ENST00000539449 ADAMTS13Q76LX8 1427 aa12.84□□□□□ -0.35
RTN4IP1-204ENST00000539449 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
RTN4IP1-204ENST00000539449 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
RTN4IP1-204ENST00000539449 C19orf44Q9H6X5 657 aa12.83□□□□□ -0.36
RTN4IP1-204ENST00000539449 METP08581 1390 aa12.82□□□□□ -0.36
RTN4IP1-204ENST00000539449 PLEKHG1Q9ULL1 1385 aa12.82□□□□□ -0.36
RTN4IP1-204ENST00000539449 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
RTN4IP1-204ENST00000539449 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
RTN4IP1-204ENST00000539449 STK26Q9P289 416 aa12.82□□□□□ -0.36
RTN4IP1-204ENST00000539449 QRICH2Q9H0J4 1663 aa12.82□□□□□ -0.36
RTN4IP1-204ENST00000539449 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
RTN4IP1-204ENST00000539449 YTHDC2Q9H6S0 1430 aaKnown RBP12.81□□□□□ -0.36
RTN4IP1-204ENST00000539449 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
RTN4IP1-204ENST00000539449 USP21Q9UK80 565 aa12.81□□□□□ -0.36
RTN4IP1-204ENST00000539449 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
RTN4IP1-204ENST00000539449 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
RTN4IP1-204ENST00000539449 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
RTN4IP1-204ENST00000539449 DCAF8L1A6NGE4 600 aa12.79□□□□□ -0.36
RTN4IP1-204ENST00000539449 ATRNO75882 1429 aa12.79□□□□□ -0.36
RTN4IP1-204ENST00000539449 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
RTN4IP1-204ENST00000539449 LRPPRCP42704 1394 aaKnown RBP12.78□□□□□ -0.36
RTN4IP1-204ENST00000539449 BLMP54132 1417 aaPredicted RBP12.78□□□□□ -0.36
RTN4IP1-204ENST00000539449 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
RTN4IP1-204ENST00000539449 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.36
RTN4IP1-204ENST00000539449 YY1P25490 414 aa12.77□□□□□ -0.37
RTN4IP1-204ENST00000539449 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
RTN4IP1-204ENST00000539449 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
RTN4IP1-204ENST00000539449 EIF3AQ14152 1382 aaKnown RBP12.77□□□□□ -0.37
RTN4IP1-204ENST00000539449 TBX22Q9Y458 520 aa12.76□□□□□ -0.37
RTN4IP1-204ENST00000539449 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
RTN4IP1-204ENST00000539449 SAFB2Q14151 953 aaKnown RBP eCLIP12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 MIER1Q8N108 512 aa12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 ABCC11Q96J66 1382 aa12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
RTN4IP1-204ENST00000539449 DCCP43146 1447 aa12.74□□□□□ -0.37
RTN4IP1-204ENST00000539449 MST1RQ04912 1400 aa12.74□□□□□ -0.37
RTN4IP1-204ENST00000539449 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
RTN4IP1-204ENST00000539449 TMF1P82094 1093 aa12.74□□□□□ -0.37
RTN4IP1-204ENST00000539449 PRAM1Q96QH2 718 aa12.74□□□□□ -0.37
RTN4IP1-204ENST00000539449 TULP4Q9NRJ4 1543 aa12.73□□□□□ -0.37
RTN4IP1-204ENST00000539449 SBNO2Q9Y2G9 1366 aa12.73□□□□□ -0.37
RTN4IP1-204ENST00000539449 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
RTN4IP1-204ENST00000539449 MYOM1P52179 1685 aa12.73□□□□□ -0.37
RTN4IP1-204ENST00000539449 BCL9LQ86UU0 1499 aa12.72□□□□□ -0.37
RTN4IP1-204ENST00000539449 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
RTN4IP1-204ENST00000539449 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
RTN4IP1-204ENST00000539449 TECPR2O15040 1411 aa12.71□□□□□ -0.37
RTN4IP1-204ENST00000539449 PTCH1Q13635 1447 aa12.71□□□□□ -0.37
RTN4IP1-204ENST00000539449 XRN1Q8IZH2 1706 aaKnown RBP12.71□□□□□ -0.37
RTN4IP1-204ENST00000539449 ROBO2Q9HCK4 1378 aa12.71□□□□□ -0.37
RTN4IP1-204ENST00000539449 POGKQ9P215 609 aa12.71□□□□□ -0.37
RTN4IP1-204ENST00000539449 PIK3R4Q99570 1358 aa12.7□□□□□ -0.38
RTN4IP1-204ENST00000539449 BRWD3Q6RI45 1802 aa12.7□□□□□ -0.38
RTN4IP1-204ENST00000539449 SF3B2Q13435 895 aaKnown RBP12.7□□□□□ -0.38
RTN4IP1-204ENST00000539449 AMOTL2Q9Y2J4 779 aa12.7□□□□□ -0.38
RTN4IP1-204ENST00000539449 SIRT1Q96EB6 747 aa12.69□□□□□ -0.38
RTN4IP1-204ENST00000539449 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms