RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 FDX1P10109 184 aa13.18□□□□□ -0.3
TUBD1-206ENST00000539018 GJA5P36382 358 aa13.18□□□□□ -0.3
TUBD1-206ENST00000539018 HLA-CQ95604 372 aa13.18□□□□□ -0.3
TUBD1-206ENST00000539018 MORN1Q5T089 497 aa13.17□□□□□ -0.3
TUBD1-206ENST00000539018 LIMD1Q9UGP4 676 aa13.17□□□□□ -0.3
TUBD1-206ENST00000539018 GUCA2AQ02747 115 aa13.16□□□□□ -0.3
TUBD1-206ENST00000539018 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
TUBD1-206ENST00000539018 TUSC1Q2TAM9 212 aa13.14□□□□□ -0.31
TUBD1-206ENST00000539018 PROCA1Q8NCQ7 364 aaPredicted RBP13.14□□□□□ -0.31
TUBD1-206ENST00000539018 NR1I2O75469 434 aa13.13□□□□□ -0.31
TUBD1-206ENST00000539018 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
TUBD1-206ENST00000539018 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
TUBD1-206ENST00000539018 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
TUBD1-206ENST00000539018 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
TUBD1-206ENST00000539018 COPS2P61201 443 aa13.12□□□□□ -0.31
TUBD1-206ENST00000539018 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
TUBD1-206ENST00000539018 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
TUBD1-206ENST00000539018 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
TUBD1-206ENST00000539018 BAZ1BQ9UIG0 1483 aaKnown RBP13.11□□□□□ -0.31
TUBD1-206ENST00000539018 PCDHB15Q9Y5E8 787 aa13.11□□□□□ -0.31
TUBD1-206ENST00000539018 Q3C1V9 767 aa13.1□□□□□ -0.31
TUBD1-206ENST00000539018 MTRQ99707 1265 aa13.1□□□□□ -0.31
TUBD1-206ENST00000539018 SCUBE3Q8IX30 993 aa13.09□□□□□ -0.31
TUBD1-206ENST00000539018 PRPF38BQ5VTL8 546 aaKnown RBP13.08□□□□□ -0.32
TUBD1-206ENST00000539018 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
TUBD1-206ENST00000539018 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
TUBD1-206ENST00000539018 QPCTQ16769 361 aa13.07□□□□□ -0.32
TUBD1-206ENST00000539018 IL21Q9HBE4 155 aa13.07□□□□□ -0.32
TUBD1-206ENST00000539018 NUTM2BA6NNL0 878 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-206ENST00000539018 NUTM2EB1AL46 878 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-206ENST00000539018 LILRB3O75022 631 aa13.06□□□□□ -0.32
TUBD1-206ENST00000539018 MTMR2Q13614 643 aa13.06□□□□□ -0.32
TUBD1-206ENST00000539018 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-206ENST00000539018 NUTM2AQ8IVF1 878 aaPredicted RBP13.06□□□□□ -0.32
TUBD1-206ENST00000539018 HRCP23327 699 aa13.05□□□□□ -0.32
TUBD1-206ENST00000539018 TJAP1Q5JTD0 557 aa13.05□□□□□ -0.32
TUBD1-206ENST00000539018 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
TUBD1-206ENST00000539018 SALL2Q9Y467 1007 aaPredicted RBP13.05□□□□□ -0.32
TUBD1-206ENST00000539018 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
TUBD1-206ENST00000539018 ZPR1O75312 459 aa13.04□□□□□ -0.32
TUBD1-206ENST00000539018 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
TUBD1-206ENST00000539018 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
TUBD1-206ENST00000539018 SYMPKQ92797 1274 aaKnown RBP13.04□□□□□ -0.32
TUBD1-206ENST00000539018 SPDYE5A6NIY4 337 aa13.03□□□□□ -0.32
TUBD1-206ENST00000539018 PPP2R2DQ66LE6 453 aa13.03□□□□□ -0.32
TUBD1-206ENST00000539018 BRICD5Q6PL45 260 aa13.03□□□□□ -0.32
TUBD1-206ENST00000539018 THAP11Q96EK4 314 aa13.02□□□□□ -0.33
TUBD1-206ENST00000539018 NCAPD3P42695 1498 aa13.02□□□□□ -0.33
TUBD1-206ENST00000539018 RETREG3Q86VR2 466 aa13.01□□□□□ -0.33
TUBD1-206ENST00000539018 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
TUBD1-206ENST00000539018 RFC5P40937 340 aa13□□□□□ -0.33
TUBD1-206ENST00000539018 RTL5Q5HYW3 569 aaPredicted RBP13□□□□□ -0.33
TUBD1-206ENST00000539018 FBXO31Q5XUX0 539 aaPredicted RBP13□□□□□ -0.33
TUBD1-206ENST00000539018 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
TUBD1-206ENST00000539018 TLL1O43897 1013 aa12.99□□□□□ -0.33
TUBD1-206ENST00000539018 SPSB2Q99619 263 aa12.99□□□□□ -0.33
TUBD1-206ENST00000539018 USB1Q9BQ65 265 aaKnown RBP12.99□□□□□ -0.33
TUBD1-206ENST00000539018 ITGBL1O95965 494 aaPredicted RBP12.98□□□□□ -0.33
TUBD1-206ENST00000539018 ADH1BP00325 375 aa12.97□□□□□ -0.33
TUBD1-206ENST00000539018 KCNC4Q03721 635 aa12.97□□□□□ -0.33
TUBD1-206ENST00000539018 PRR7Q8TB68 274 aa12.97□□□□□ -0.33
TUBD1-206ENST00000539018 CFAP99D6REC4 459 aa12.95□□□□□ -0.34
TUBD1-206ENST00000539018 MSS51Q4VC12 460 aa12.94□□□□□ -0.34
TUBD1-206ENST00000539018 TMEM259Q4ZIN3 620 aa12.94□□□□□ -0.34
TUBD1-206ENST00000539018 HELBQ8NG08 1087 aaPredicted RBP12.94□□□□□ -0.34
TUBD1-206ENST00000539018 TSC1Q92574 1164 aa12.94□□□□□ -0.34
TUBD1-206ENST00000539018 PRDM2Q13029 1718 aa12.93□□□□□ -0.34
TUBD1-206ENST00000539018 NKX2-3Q8TAU0 364 aa12.93□□□□□ -0.34
TUBD1-206ENST00000539018 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
TUBD1-206ENST00000539018 AP1G2O75843 785 aa12.92□□□□□ -0.34
TUBD1-206ENST00000539018 FAM160A2Q8N612 972 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-206ENST00000539018 DESI1Q6ICB0 168 aa12.9□□□□□ -0.34
TUBD1-206ENST00000539018 SLC6A16Q9GZN6 736 aa12.9□□□□□ -0.34
TUBD1-206ENST00000539018 JUNDP17535 347 aa12.89□□□□□ -0.35
TUBD1-206ENST00000539018 BANK1Q8NDB2 785 aa12.89□□□□□ -0.35
TUBD1-206ENST00000539018 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
TUBD1-206ENST00000539018 DXOO77932 396 aaKnown RBP12.86□□□□□ -0.35
TUBD1-206ENST00000539018 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
TUBD1-206ENST00000539018 CTDSPL2Q05D32 466 aa12.86□□□□□ -0.35
TUBD1-206ENST00000539018 S1PR4O95977 384 aa12.85□□□□□ -0.35
TUBD1-206ENST00000539018 MMP16P51512 607 aa12.85□□□□□ -0.35
TUBD1-206ENST00000539018 FLIIQ13045 1269 aa12.84□□□□□ -0.35
TUBD1-206ENST00000539018 LYPD8Q6UX82 237 aa12.83□□□□□ -0.36
TUBD1-206ENST00000539018 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
TUBD1-206ENST00000539018 GGCXP38435 758 aa12.82□□□□□ -0.36
TUBD1-206ENST00000539018 PTPRNQ16849 979 aa12.82□□□□□ -0.36
TUBD1-206ENST00000539018 IFFO2Q5TF58 517 aa12.82□□□□□ -0.36
TUBD1-206ENST00000539018 PER1O15534 1290 aaPredicted RBP12.81□□□□□ -0.36
TUBD1-206ENST00000539018 MCM6Q14566 821 aa12.8□□□□□ -0.36
TUBD1-206ENST00000539018 SNRKQ9NRH2 765 aa12.8□□□□□ -0.36
TUBD1-206ENST00000539018 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
TUBD1-206ENST00000539018 LRRN4Q8WUT4 740 aa12.79□□□□□ -0.36
TUBD1-206ENST00000539018 NUDT12Q9BQG2 462 aa12.79□□□□□ -0.36
TUBD1-206ENST00000539018 CCNYL3P0C7X3 344 aa12.78□□□□□ -0.36
TUBD1-206ENST00000539018 PPP1R18Q6NYC8 613 aa12.77□□□□□ -0.37
TUBD1-206ENST00000539018 MTMR14Q8NCE2 650 aa12.77□□□□□ -0.37
TUBD1-206ENST00000539018 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.77□□□□□ -0.37
TUBD1-206ENST00000539018 APBB1O00213 710 aa12.76□□□□□ -0.37
TUBD1-206ENST00000539018 SOCS7O14512 581 aa12.76□□□□□ -0.37
TUBD1-206ENST00000539018 HMX1Q9NP08 348 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms