RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 ADGRB1O14514 1584 aa14.01□□□□□ -0.17
LDHA-216ENST00000538451 STK26Q9P289 416 aa14□□□□□ -0.17
LDHA-216ENST00000538451 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
LDHA-216ENST00000538451 TOM1O60784 492 aa13.99□□□□□ -0.17
LDHA-216ENST00000538451 SIRT1Q96EB6 747 aa13.99□□□□□ -0.17
LDHA-216ENST00000538451 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
LDHA-216ENST00000538451 ABCC11Q96J66 1382 aa13.99□□□□□ -0.17
LDHA-216ENST00000538451 SBNO2Q9Y2G9 1366 aa13.98□□□□□ -0.17
LDHA-216ENST00000538451 SLC26A8Q96RN1 970 aa13.98□□□□□ -0.17
LDHA-216ENST00000538451 DIEXFQ68CQ4 756 aaKnown RBP13.97□□□□□ -0.17
LDHA-216ENST00000538451 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
LDHA-216ENST00000538451 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
LDHA-216ENST00000538451 ADAMTS13Q76LX8 1427 aa13.97□□□□□ -0.17
LDHA-216ENST00000538451 KCNA6P17658 529 aa13.96□□□□□ -0.17
LDHA-216ENST00000538451 EVC2Q86UK5 1308 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 POLR3GLQ9BT43 218 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 STRCP1A6NGW2 1772 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 FAM135BQ49AJ0 1406 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 METP08581 1390 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 CCDC7Q96M83 1385 aa13.95□□□□□ -0.18
LDHA-216ENST00000538451 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
LDHA-216ENST00000538451 TESK2Q96S53 571 aa13.94□□□□□ -0.18
LDHA-216ENST00000538451 KIF7Q2M1P5 1343 aa13.94□□□□□ -0.18
LDHA-216ENST00000538451 WASHC2AQ641Q2 1341 aa13.94□□□□□ -0.18
LDHA-216ENST00000538451 PUS7Q96PZ0 661 aaKnown RBP13.93□□□□□ -0.18
LDHA-216ENST00000538451 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
LDHA-216ENST00000538451 TECPR2O15040 1411 aa13.93□□□□□ -0.18
LDHA-216ENST00000538451 SETD1AO15047 1707 aaKnown RBP13.93□□□□□ -0.18
LDHA-216ENST00000538451 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
LDHA-216ENST00000538451 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
LDHA-216ENST00000538451 NKTRP30414 1462 aaKnown RBP13.92□□□□□ -0.18
LDHA-216ENST00000538451 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
LDHA-216ENST00000538451 PROSER2Q86WR7 435 aaPredicted RBP13.91□□□□□ -0.18
LDHA-216ENST00000538451 KNDC1Q76NI1 1749 aa13.91□□□□□ -0.18
LDHA-216ENST00000538451 ARHGEF28Q8N1W1 1705 aaKnown RBP13.91□□□□□ -0.18
LDHA-216ENST00000538451 NWD1Q149M9 1564 aa13.9□□□□□ -0.18
LDHA-216ENST00000538451 QRICH2Q9H0J4 1663 aa13.9□□□□□ -0.18
LDHA-216ENST00000538451 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
LDHA-216ENST00000538451 TMEM94Q12767 1356 aa13.89□□□□□ -0.19
LDHA-216ENST00000538451 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
LDHA-216ENST00000538451 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
LDHA-216ENST00000538451 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
LDHA-216ENST00000538451 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
LDHA-216ENST00000538451 MINK1Q8N4C8 1332 aaPredicted RBP13.87□□□□□ -0.19
LDHA-216ENST00000538451 WAPLQ7Z5K2 1190 aa13.87□□□□□ -0.19
LDHA-216ENST00000538451 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
LDHA-216ENST00000538451 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
LDHA-216ENST00000538451 NINLQ9Y2I6 1382 aa13.87□□□□□ -0.19
LDHA-216ENST00000538451 ANP32CO43423 234 aa13.86□□□□□ -0.19
LDHA-216ENST00000538451 CHD2O14647 1828 aaKnown RBP13.86□□□□□ -0.19
LDHA-216ENST00000538451 MSH6P52701 1360 aa13.85□□□□□ -0.19
LDHA-216ENST00000538451 NCOA3Q9Y6Q9 1424 aa13.84□□□□□ -0.19
LDHA-216ENST00000538451 ROBO2Q9HCK4 1378 aa13.84□□□□□ -0.19
LDHA-216ENST00000538451 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
LDHA-216ENST00000538451 C14orf37Q86TY3 774 aa13.84□□□□□ -0.19
LDHA-216ENST00000538451 RBM33Q96EV2 1170 aaKnown RBP13.84□□□□□ -0.19
LDHA-216ENST00000538451 PTPRUQ92729 1446 aa13.84□□□□□ -0.19
LDHA-216ENST00000538451 XIRP1Q702N8 1843 aaKnown RBP13.84□□□□□ -0.19
LDHA-216ENST00000538451 HSPA1LP34931 641 aa13.83□□□□□ -0.2
LDHA-216ENST00000538451 TMC1Q8TDI8 760 aa13.83□□□□□ -0.2
LDHA-216ENST00000538451 CDK19Q9BWU1 502 aa13.83□□□□□ -0.2
LDHA-216ENST00000538451 XRN1Q8IZH2 1706 aaKnown RBP13.83□□□□□ -0.2
LDHA-216ENST00000538451 TERF2IPQ9NYB0 399 aa13.81□□□□□ -0.2
LDHA-216ENST00000538451 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
LDHA-216ENST00000538451 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
LDHA-216ENST00000538451 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
LDHA-216ENST00000538451 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
LDHA-216ENST00000538451 C19orf44Q9H6X5 657 aa13.79□□□□□ -0.2
LDHA-216ENST00000538451 TULP4Q9NRJ4 1543 aa13.78□□□□□ -0.2
LDHA-216ENST00000538451 ADGRB2O60241 1585 aa13.78□□□□□ -0.2
LDHA-216ENST00000538451 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
LDHA-216ENST00000538451 PANK3Q9H999 370 aa13.78□□□□□ -0.2
LDHA-216ENST00000538451 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
LDHA-216ENST00000538451 ATF3P18847 181 aa13.77□□□□□ -0.21
LDHA-216ENST00000538451 SLAIN2Q9P270 581 aa13.77□□□□□ -0.21
LDHA-216ENST00000538451 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
LDHA-216ENST00000538451 NUDT16Q96DE0 195 aaKnown RBP13.76□□□□□ -0.21
LDHA-216ENST00000538451 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
LDHA-216ENST00000538451 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
LDHA-216ENST00000538451 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
LDHA-216ENST00000538451 ADGRL3Q9HAR2 1447 aa13.75□□□□□ -0.21
LDHA-216ENST00000538451 DSG3P32926 999 aa13.74□□□□□ -0.21
LDHA-216ENST00000538451 ANKARQ7Z5J8 1434 aa13.74□□□□□ -0.21
LDHA-216ENST00000538451 SLC12A5Q9H2X9 1139 aa13.74□□□□□ -0.21
LDHA-216ENST00000538451 DCCP43146 1447 aa13.73□□□□□ -0.21
LDHA-216ENST00000538451 RALBP1Q15311 655 aa13.73□□□□□ -0.21
LDHA-216ENST00000538451 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
LDHA-216ENST00000538451 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
LDHA-216ENST00000538451 ROBO1Q9Y6N7 1651 aa13.73□□□□□ -0.21
LDHA-216ENST00000538451 CDC42BPGQ6DT37 1551 aa13.73□□□□□ -0.21
LDHA-216ENST00000538451 PPIP5K1Q6PFW1 1433 aa13.72□□□□□ -0.21
LDHA-216ENST00000538451 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
LDHA-216ENST00000538451 ATP7BP35670 1465 aa13.72□□□□□ -0.21
LDHA-216ENST00000538451 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
LDHA-216ENST00000538451 MIER1Q8N108 512 aa13.7□□□□□ -0.22
LDHA-216ENST00000538451 ITSN1Q15811 1721 aa13.7□□□□□ -0.22
LDHA-216ENST00000538451 MYOM1P52179 1685 aa13.7□□□□□ -0.22
LDHA-216ENST00000538451 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
LDHA-216ENST00000538451 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms