RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
RFX4-204ENST00000536688 CBX1P83916 185 aa12.63□□□□□ -0.39
RFX4-204ENST00000536688 DNTTIP2Q5QJE6 756 aaKnown RBP12.63□□□□□ -0.39
RFX4-204ENST00000536688 KIAA2012Q0VF49 1180 aa12.62□□□□□ -0.39
RFX4-204ENST00000536688 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
RFX4-204ENST00000536688 ST20-MTHFSA0A0A6YYL1 179 aa12.62□□□□□ -0.39
RFX4-204ENST00000536688 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
RFX4-204ENST00000536688 E9PSI1 815 aa12.61□□□□□ -0.39
RFX4-204ENST00000536688 PANK3Q9H999 370 aa12.61□□□□□ -0.39
RFX4-204ENST00000536688 ADAMTS8Q9UP79 889 aa12.61□□□□□ -0.39
RFX4-204ENST00000536688 DDX49Q9Y6V7 483 aaKnown RBP12.61□□□□□ -0.39
RFX4-204ENST00000536688 DAPK1P53355 1430 aa12.61□□□□□ -0.39
RFX4-204ENST00000536688 FAM193AP78312 1265 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 ATP2B3Q16720 1220 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 TSPYL1Q9H0U9 437 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
RFX4-204ENST00000536688 LAMC1P11047 1609 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 CCDC66A2RUB6 948 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
RFX4-204ENST00000536688 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
RFX4-204ENST00000536688 MAGI3Q5TCQ9 1506 aa12.59□□□□□ -0.39
RFX4-204ENST00000536688 ARID3AQ99856 593 aa12.59□□□□□ -0.39
RFX4-204ENST00000536688 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
RFX4-204ENST00000536688 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
RFX4-204ENST00000536688 SOCS7O14512 581 aa12.57□□□□□ -0.4
RFX4-204ENST00000536688 ZSCAN23Q3MJ62 389 aa12.57□□□□□ -0.4
RFX4-204ENST00000536688 OGFRQ9NZT2 677 aa12.57□□□□□ -0.4
RFX4-204ENST00000536688 VGLL3A8MV65 326 aa12.57□□□□□ -0.4
RFX4-204ENST00000536688 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
RFX4-204ENST00000536688 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
RFX4-204ENST00000536688 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
RFX4-204ENST00000536688 PDCL2Q8N4E4 241 aa12.57□□□□□ -0.4
RFX4-204ENST00000536688 RBSNQ9H1K0 784 aa12.57□□□□□ -0.4
RFX4-204ENST00000536688 BAG4O95429 457 aaKnown RBP12.56□□□□□ -0.4
RFX4-204ENST00000536688 ANKRD7Q92527 254 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 PIK3C2GO75747 1445 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 BCAR3O75815 825 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 CREBRFQ8IUR6 639 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 PIBF1Q8WXW3 757 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 LMTK3Q96Q04 1460 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 YEATS2Q9ULM3 1422 aa12.56□□□□□ -0.4
RFX4-204ENST00000536688 ABCC5O15440 1437 aa12.55□□□□□ -0.4
RFX4-204ENST00000536688 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
RFX4-204ENST00000536688 NUP160Q12769 1436 aa12.55□□□□□ -0.4
RFX4-204ENST00000536688 BRD2P25440 801 aaKnown RBP12.54□□□□□ -0.4
RFX4-204ENST00000536688 SYCP1Q15431 976 aa12.54□□□□□ -0.4
RFX4-204ENST00000536688 ZNF771Q7L3S4 317 aaPredicted RBP12.54□□□□□ -0.4
RFX4-204ENST00000536688 SPTLC3Q9NUV7 552 aa12.54□□□□□ -0.4
RFX4-204ENST00000536688 GPRASP1Q5JY77 1395 aa12.54□□□□□ -0.4
RFX4-204ENST00000536688 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
RFX4-204ENST00000536688 RGS22Q8NE09 1264 aa12.54□□□□□ -0.4
RFX4-204ENST00000536688 FAM135AQ9P2D6 1515 aa12.54□□□□□ -0.4
RFX4-204ENST00000536688 ADGBQ8N7X0 1667 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 TRPM1Q7Z4N2 1603 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 TULP2O00295 520 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
RFX4-204ENST00000536688 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 UHRF1BP1LA0JNW5 1464 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 NUCB2P80303 420 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
RFX4-204ENST00000536688 KIAA0586Q9BVV6 1533 aa12.52□□□□□ -0.4
RFX4-204ENST00000536688 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.4
RFX4-204ENST00000536688 FKBP5Q13451 457 aaPredicted RBP12.52□□□□□ -0.4
RFX4-204ENST00000536688 YY1AP1Q9H869 796 aa12.52□□□□□ -0.4
RFX4-204ENST00000536688 COG6Q9Y2V7 657 aa12.52□□□□□ -0.4
RFX4-204ENST00000536688 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.41
RFX4-204ENST00000536688 ERCC6L2Q5T890 1561 aa12.51□□□□□ -0.41
RFX4-204ENST00000536688 CTIFO43310 598 aaKnown RBP12.51□□□□□ -0.41
RFX4-204ENST00000536688 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
RFX4-204ENST00000536688 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
RFX4-204ENST00000536688 CALCOCO1Q9P1Z2 691 aa12.51□□□□□ -0.41
RFX4-204ENST00000536688 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
RFX4-204ENST00000536688 KCNJ4P48050 445 aa12.5□□□□□ -0.41
RFX4-204ENST00000536688 NOLC1Q14978 699 aaKnown RBP eCLIP12.5□□□□□ -0.41
RFX4-204ENST00000536688 CC2D1BQ5T0F9 858 aaKnown RBP12.5□□□□□ -0.41
RFX4-204ENST00000536688 SSFA2P28290 1259 aa12.5□□□□□ -0.41
RFX4-204ENST00000536688 CAVIN1Q6NZI2 390 aaKnown RBP12.5□□□□□ -0.41
RFX4-204ENST00000536688 PANK1Q8TE04 598 aa12.5□□□□□ -0.41
RFX4-204ENST00000536688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.5□□□□□ -0.41
RFX4-204ENST00000536688 KIF16BQ96L93 1317 aa12.49□□□□□ -0.41
RFX4-204ENST00000536688 SLFN14P0C7P3 912 aa12.49□□□□□ -0.41
RFX4-204ENST00000536688 MMP14P50281 582 aa12.49□□□□□ -0.41
RFX4-204ENST00000536688 PRDM15P57071 1507 aaPredicted RBP12.49□□□□□ -0.41
RFX4-204ENST00000536688 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
RFX4-204ENST00000536688 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
RFX4-204ENST00000536688 ITSN2Q9NZM3 1697 aa12.49□□□□□ -0.41
RFX4-204ENST00000536688 KDM5DQ9BY66 1539 aa12.48□□□□□ -0.41
RFX4-204ENST00000536688 HDAC1Q13547 482 aaPredicted RBP12.48□□□□□ -0.41
RFX4-204ENST00000536688 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
RFX4-204ENST00000536688 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
RFX4-204ENST00000536688 PTMAP06454 111 aaKnown RBP12.47□□□□□ -0.41
RFX4-204ENST00000536688 CHAF1AQ13111 956 aaPredicted RBP12.47□□□□□ -0.41
RFX4-204ENST00000536688 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
RFX4-204ENST00000536688 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
RFX4-204ENST00000536688 EFCC1Q9HA90 598 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms