RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ANKRD36BQ8N2N9 1353 aa30.5■■■□□ 2.47
HMGA2-206ENST00000536545 KNDC1Q76NI1 1749 aa30.49■■■□□ 2.47
HMGA2-206ENST00000536545 ABCC11Q96J66 1382 aa30.47■■■□□ 2.47
HMGA2-206ENST00000536545 CABP2Q9NPB3 220 aa30.46■■■□□ 2.47
HMGA2-206ENST00000536545 POGKQ9P215 609 aa30.46■■■□□ 2.47
HMGA2-206ENST00000536545 ATAD2Q6PL18 1390 aa30.45■■■□□ 2.47
HMGA2-206ENST00000536545 MINK1Q8N4C8 1332 aaPredicted RBP30.44■■■□□ 2.46
HMGA2-206ENST00000536545 HDGFP51858 240 aaKnown RBP30.43■■■□□ 2.46
HMGA2-206ENST00000536545 NUDCQ9Y266 331 aa30.43■■■□□ 2.46
HMGA2-206ENST00000536545 METP08581 1390 aa30.43■■■□□ 2.46
HMGA2-206ENST00000536545 TECPR2O15040 1411 aa30.42■■■□□ 2.46
HMGA2-206ENST00000536545 CPS1P31327 1500 aa30.41■■■□□ 2.46
HMGA2-206ENST00000536545 CEBPAP49715 358 aaPredicted RBP30.41■■■□□ 2.46
HMGA2-206ENST00000536545 NSD2O96028 1365 aa30.39■■■□□ 2.45
HMGA2-206ENST00000536545 PLEKHH1Q9ULM0 1364 aa30.39■■■□□ 2.45
HMGA2-206ENST00000536545 SRPK2P78362 688 aaKnown RBP30.38■■■□□ 2.45
HMGA2-206ENST00000536545 CGNL1Q0VF96 1302 aa30.38■■■□□ 2.45
HMGA2-206ENST00000536545 SENP3-EIF4A1A0A087X0R7 540 aa30.38■■■□□ 2.45
HMGA2-206ENST00000536545 SLIT1O75093 1534 aa30.38■■■□□ 2.45
HMGA2-206ENST00000536545 ADAMTS13Q76LX8 1427 aa30.37■■■□□ 2.45
HMGA2-206ENST00000536545 A0A1W2PP64 1363 aa30.37■■■□□ 2.45
HMGA2-206ENST00000536545 CD163L1Q9NR16 1453 aa30.37■■■□□ 2.45
HMGA2-206ENST00000536545 PLEKHG1Q9ULL1 1385 aa30.37■■■□□ 2.45
HMGA2-206ENST00000536545 ARHGAP23Q9P227 1491 aa30.36■■■□□ 2.45
HMGA2-206ENST00000536545 FAM135BQ49AJ0 1406 aa30.35■■■□□ 2.45
HMGA2-206ENST00000536545 ADAMTS8Q9UP79 889 aa30.35■■■□□ 2.45
HMGA2-206ENST00000536545 WDR43Q15061 677 aaKnown RBP eCLIP30.33■■■□□ 2.45
HMGA2-206ENST00000536545 BCANQ96GW7 911 aa30.33■■■□□ 2.45
HMGA2-206ENST00000536545 WAPLQ7Z5K2 1190 aa30.32■■■□□ 2.44
HMGA2-206ENST00000536545 CDK19Q9BWU1 502 aa30.32■■■□□ 2.44
HMGA2-206ENST00000536545 POLR3AO14802 1390 aaPredicted RBP30.32■■■□□ 2.44
HMGA2-206ENST00000536545 MORC1Q86VD1 984 aa30.31■■■□□ 2.44
HMGA2-206ENST00000536545 MED14O60244 1454 aa30.31■■■□□ 2.44
HMGA2-206ENST00000536545 SIRT1Q96EB6 747 aa30.3■■■□□ 2.44
HMGA2-206ENST00000536545 LTKP29376 864 aa30.28■■■□□ 2.44
HMGA2-206ENST00000536545 PDE3BQ13370 1112 aa30.28■■■□□ 2.44
HMGA2-206ENST00000536545 ANKRD26Q9UPS8 1709 aa30.28■■■□□ 2.44
HMGA2-206ENST00000536545 SHPRHQ149N8 1683 aa30.27■■■□□ 2.44
HMGA2-206ENST00000536545 ATP7BP35670 1465 aa30.26■■■□□ 2.43
HMGA2-206ENST00000536545 TERF2IPQ9NYB0 399 aa30.26■■■□□ 2.43
HMGA2-206ENST00000536545 RNF123Q5XPI4 1314 aa30.25■■■□□ 2.43
HMGA2-206ENST00000536545 RIMS1Q86UR5 1692 aaKnown RBP30.24■■■□□ 2.43
HMGA2-206ENST00000536545 ERICH6BQ5W0A0 696 aa30.23■■■□□ 2.43
HMGA2-206ENST00000536545 TXNDC2Q86VQ3 553 aa30.23■■■□□ 2.43
HMGA2-206ENST00000536545 DNAJC5Q9H3Z4 198 aa30.23■■■□□ 2.43
HMGA2-206ENST00000536545 ADGRB2O60241 1585 aa30.22■■■□□ 2.43
HMGA2-206ENST00000536545 IRX6P78412 446 aaPredicted RBP30.22■■■□□ 2.43
HMGA2-206ENST00000536545 SALL2Q9Y467 1007 aaPredicted RBP30.21■■■□□ 2.43
HMGA2-206ENST00000536545 DIP2AQ14689 1571 aa30.2■■■□□ 2.43
HMGA2-206ENST00000536545 CEP170BQ9Y4F5 1589 aaPredicted RBP30.2■■■□□ 2.43
HMGA2-206ENST00000536545 ROBO2Q9HCK4 1378 aa30.2■■■□□ 2.43
HMGA2-206ENST00000536545 KIF20BQ96Q89 1820 aa30.2■■■□□ 2.42
HMGA2-206ENST00000536545 EID1Q9Y6B2 187 aa30.19■■■□□ 2.42
HMGA2-206ENST00000536545 ADAMTSL3P82987 1691 aa30.19■■■□□ 2.42
HMGA2-206ENST00000536545 WASLO00401 505 aaPredicted RBP30.18■■■□□ 2.42
HMGA2-206ENST00000536545 HDGFL2Q7Z4V5 671 aaPredicted RBP30.18■■■□□ 2.42
HMGA2-206ENST00000536545 CABP1Q9NZU7 370 aa30.18■■■□□ 2.42
HMGA2-206ENST00000536545 TNNT2P45379 298 aaPredicted RBP30.16■■■□□ 2.42
HMGA2-206ENST00000536545 PLPPR3Q6T4P5 718 aa30.16■■■□□ 2.42
HMGA2-206ENST00000536545 PTPRUQ92729 1446 aa30.16■■■□□ 2.42
HMGA2-206ENST00000536545 THEMISQ8N1K5 641 aaPredicted RBP30.15■■■□□ 2.42
HMGA2-206ENST00000536545 ZNF521Q96K83 1311 aa30.14■■■□□ 2.41
HMGA2-206ENST00000536545 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.14■■■□□ 2.41
HMGA2-206ENST00000536545 PELP1Q8IZL8 1130 aaKnown RBP30.13■■■□□ 2.41
HMGA2-206ENST00000536545 CDC42BPGQ6DT37 1551 aa30.13■■■□□ 2.41
HMGA2-206ENST00000536545 ZNF142P52746 1687 aaPredicted RBP30.13■■■□□ 2.41
HMGA2-206ENST00000536545 CDCA7LQ96GN5 454 aa30.13■■■□□ 2.41
HMGA2-206ENST00000536545 CPSF1Q10570 1443 aaKnown RBP30.12■■■□□ 2.41
HMGA2-206ENST00000536545 PPIP5K1Q6PFW1 1433 aa30.12■■■□□ 2.41
HMGA2-206ENST00000536545 FYB1O15117 783 aa30.11■■■□□ 2.41
HMGA2-206ENST00000536545 MTHFSP49914 203 aa30.11■■■□□ 2.41
HMGA2-206ENST00000536545 PTCH1Q13635 1447 aa30.1■■■□□ 2.41
HMGA2-206ENST00000536545 CCDC146Q8IYE0 955 aa30.09■■■□□ 2.41
HMGA2-206ENST00000536545 GGNBP2Q9H3C7 697 aa30.09■■■□□ 2.41
HMGA2-206ENST00000536545 TBX22Q9Y458 520 aa30.08■■■□□ 2.41
HMGA2-206ENST00000536545 MON2Q7Z3U7 1717 aa30.08■■■□□ 2.41
HMGA2-206ENST00000536545 TOPAZ1Q8N9V7 1692 aa30.07■■■□□ 2.4
HMGA2-206ENST00000536545 XRN1Q8IZH2 1706 aaKnown RBP30.07■■■□□ 2.4
HMGA2-206ENST00000536545 COL3A1P02461 1466 aaPredicted RBP30.07■■■□□ 2.4
HMGA2-206ENST00000536545 CFAP53Q96M91 514 aa30.07■■■□□ 2.4
HMGA2-206ENST00000536545 SLC26A8Q96RN1 970 aa30.07■■■□□ 2.4
HMGA2-206ENST00000536545 EDC4Q6P2E9 1401 aaKnown RBP30.07■■■□□ 2.4
HMGA2-206ENST00000536545 AKAP12Q02952 1782 aa30.06■■■□□ 2.4
HMGA2-206ENST00000536545 IQSEC2Q5JU85 1478 aa30.05■■■□□ 2.4
HMGA2-206ENST00000536545 NUDT16Q96DE0 195 aaKnown RBP30.05■■■□□ 2.4
HMGA2-206ENST00000536545 ITSN1Q15811 1721 aa30.04■■■□□ 2.4
HMGA2-206ENST00000536545 PPP4R2Q9NY27 417 aa30.03■■■□□ 2.4
HMGA2-206ENST00000536545 RCAN3Q9UKA8 241 aa30.03■■■□□ 2.4
HMGA2-206ENST00000536545 PRR36Q9H6K5 1346 aa30.03■■■□□ 2.4
HMGA2-206ENST00000536545 APAF1O14727 1248 aa30.02■■■□□ 2.4
HMGA2-206ENST00000536545 NGEFQ8N5V2 710 aa30.02■■■□□ 2.4
HMGA2-206ENST00000536545 CCDC61Q9Y6R9 512 aa30.01■■■□□ 2.39
HMGA2-206ENST00000536545 RRP1P56182 461 aaKnown RBP29.98■■■□□ 2.39
HMGA2-206ENST00000536545 AMOTL2Q9Y2J4 779 aa29.98■■■□□ 2.39
HMGA2-206ENST00000536545 GOLGA2Q08379 1002 aa29.97■■■□□ 2.39
HMGA2-206ENST00000536545 NRKQ7Z2Y5 1582 aa29.96■■■□□ 2.39
HMGA2-206ENST00000536545 NCKAP5LQ9HCH0 1330 aa29.96■■■□□ 2.39
HMGA2-206ENST00000536545 DUSP27Q5VZP5 1158 aa29.95■■■□□ 2.39
HMGA2-206ENST00000536545 PIK3R4Q99570 1358 aa29.95■■■□□ 2.39
HMGA2-206ENST00000536545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.95■■■□□ 2.383e-8■■□□□ 13.7
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms