RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 TRAK1Q9UPV9 953 aa17.04■□□□□ 0.32
LGR5-202ENST00000536515 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
LGR5-202ENST00000536515 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
LGR5-202ENST00000536515 GGT6Q6P531 493 aa17.03■□□□□ 0.32
LGR5-202ENST00000536515 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
LGR5-202ENST00000536515 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
LGR5-202ENST00000536515 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.32
LGR5-202ENST00000536515 NEFMP07197 916 aa17.02■□□□□ 0.31
LGR5-202ENST00000536515 RGS3P49796 1198 aa17.02■□□□□ 0.31
LGR5-202ENST00000536515 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
LGR5-202ENST00000536515 SLC12A5Q9H2X9 1139 aa17.01■□□□□ 0.31
LGR5-202ENST00000536515 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
LGR5-202ENST00000536515 MYO3AQ8NEV4 1616 aa17■□□□□ 0.31
LGR5-202ENST00000536515 CFAP65Q6ZU64 1925 aaKnown RBP17■□□□□ 0.31
LGR5-202ENST00000536515 FAM161AQ3B820 660 aa17■□□□□ 0.31
LGR5-202ENST00000536515 MORC1Q86VD1 984 aa17■□□□□ 0.31
LGR5-202ENST00000536515 POLR3AO14802 1390 aaPredicted RBP17■□□□□ 0.31
LGR5-202ENST00000536515 TMEM132EQ6IEE7 984 aa17■□□□□ 0.31
LGR5-202ENST00000536515 ADGRB3O60242 1522 aa17■□□□□ 0.31
LGR5-202ENST00000536515 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
LGR5-202ENST00000536515 FER1L4A9Z1Z3 1794 aa16.99■□□□□ 0.31
LGR5-202ENST00000536515 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
LGR5-202ENST00000536515 ARHGAP31Q2M1Z3 1444 aa16.99■□□□□ 0.31
LGR5-202ENST00000536515 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
LGR5-202ENST00000536515 NGEFQ8N5V2 710 aa16.98■□□□□ 0.31
LGR5-202ENST00000536515 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
LGR5-202ENST00000536515 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
LGR5-202ENST00000536515 NPATQ14207 1427 aa16.97■□□□□ 0.31
LGR5-202ENST00000536515 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
LGR5-202ENST00000536515 SLC4A3P48751 1232 aa16.97■□□□□ 0.31
LGR5-202ENST00000536515 RRP7AQ9Y3A4 280 aaKnown RBP16.97■□□□□ 0.31
LGR5-202ENST00000536515 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
LGR5-202ENST00000536515 CANXP27824 592 aaKnown RBP16.95■□□□□ 0.3
LGR5-202ENST00000536515 IGHDP01880 384 aa16.94■□□□□ 0.3
LGR5-202ENST00000536515 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
LGR5-202ENST00000536515 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
LGR5-202ENST00000536515 MLECQ14165 292 aa16.94■□□□□ 0.3
LGR5-202ENST00000536515 PANK1Q8TE04 598 aa16.94■□□□□ 0.3
LGR5-202ENST00000536515 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 PPLO60437 1756 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 PDE3AQ14432 1141 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
LGR5-202ENST00000536515 RUNDC1Q96C34 613 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 SHPRHQ149N8 1683 aa16.93■□□□□ 0.3
LGR5-202ENST00000536515 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
LGR5-202ENST00000536515 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
LGR5-202ENST00000536515 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
LGR5-202ENST00000536515 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
LGR5-202ENST00000536515 MTHFSP49914 203 aa16.92■□□□□ 0.3
LGR5-202ENST00000536515 CLUAP1Q96AJ1 413 aa16.9■□□□□ 0.3
LGR5-202ENST00000536515 ESF1Q9H501 851 aaKnown RBP16.9■□□□□ 0.3
LGR5-202ENST00000536515 C3P01024 1663 aa16.89■□□□□ 0.29
LGR5-202ENST00000536515 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.29
LGR5-202ENST00000536515 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
LGR5-202ENST00000536515 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
LGR5-202ENST00000536515 ZMYM3Q14202 1370 aa16.88■□□□□ 0.29
LGR5-202ENST00000536515 NINLQ9Y2I6 1382 aa16.88■□□□□ 0.29
LGR5-202ENST00000536515 RARSP54136 660 aaKnown RBP16.88■□□□□ 0.29
LGR5-202ENST00000536515 CFAP53Q96M91 514 aa16.87■□□□□ 0.29
LGR5-202ENST00000536515 IQSEC2Q5JU85 1478 aa16.87■□□□□ 0.29
LGR5-202ENST00000536515 PHF23Q9BUL5 403 aaPredicted RBP16.87■□□□□ 0.29
LGR5-202ENST00000536515 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
LGR5-202ENST00000536515 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
LGR5-202ENST00000536515 EVC2Q86UK5 1308 aa16.86■□□□□ 0.29
LGR5-202ENST00000536515 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
LGR5-202ENST00000536515 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
LGR5-202ENST00000536515 SAFB2Q14151 953 aaKnown RBP eCLIP16.85■□□□□ 0.29
LGR5-202ENST00000536515 NFKBIBQ15653 356 aa16.85■□□□□ 0.29
LGR5-202ENST00000536515 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
LGR5-202ENST00000536515 CABP2Q9NPB3 220 aa16.85■□□□□ 0.29
LGR5-202ENST00000536515 RLBP1P12271 317 aa16.84■□□□□ 0.29
LGR5-202ENST00000536515 TULP4Q9NRJ4 1543 aa16.84■□□□□ 0.29
LGR5-202ENST00000536515 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
LGR5-202ENST00000536515 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.29
LGR5-202ENST00000536515 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.29
LGR5-202ENST00000536515 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.291e-6■□□□□ 11.1
LGR5-202ENST00000536515 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
LGR5-202ENST00000536515 MAPK8IP3Q9UPT6 1336 aa16.82■□□□□ 0.28
LGR5-202ENST00000536515 CCDC27Q2M243 656 aa16.81■□□□□ 0.28
LGR5-202ENST00000536515 PCDHB15Q9Y5E8 787 aa16.81■□□□□ 0.28
LGR5-202ENST00000536515 STK26Q9P289 416 aa16.81■□□□□ 0.28
LGR5-202ENST00000536515 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
LGR5-202ENST00000536515 SEC24BO95487 1268 aa16.8■□□□□ 0.28
LGR5-202ENST00000536515 PUS7Q96PZ0 661 aaKnown RBP16.8■□□□□ 0.28
LGR5-202ENST00000536515 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
LGR5-202ENST00000536515 USP19O94966 1318 aa16.8■□□□□ 0.28
LGR5-202ENST00000536515 PMFBP1Q8TBY8 1022 aa16.79■□□□□ 0.28
LGR5-202ENST00000536515 MYH16Q9H6N6 1097 aa16.79■□□□□ 0.28
LGR5-202ENST00000536515 NSD2O96028 1365 aa16.79■□□□□ 0.28
LGR5-202ENST00000536515 PTPRMP28827 1452 aa16.79■□□□□ 0.28
LGR5-202ENST00000536515 IDI1Q13907 227 aa16.79■□□□□ 0.28
LGR5-202ENST00000536515 FBXO31Q5XUX0 539 aaPredicted RBP16.78■□□□□ 0.28
LGR5-202ENST00000536515 SRPK2P78362 688 aaKnown RBP16.78■□□□□ 0.28
LGR5-202ENST00000536515 VIRMAQ69YN4 1812 aaKnown RBP16.77■□□□□ 0.28
LGR5-202ENST00000536515 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.27
LGR5-202ENST00000536515 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.27
LGR5-202ENST00000536515 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
LGR5-202ENST00000536515 TNRQ92752 1358 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms