RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MTMR2Q13614 643 aa6.31□□□□□ -1.4
SNHG1-202ENST00000535689 WBP1LQ9NX94 342 aa6.31□□□□□ -1.4
SNHG1-202ENST00000535689 HPS5Q9UPZ3 1129 aa6.31□□□□□ -1.4
SNHG1-202ENST00000535689 SALL2Q9Y467 1007 aaPredicted RBP6.31□□□□□ -1.4
SNHG1-202ENST00000535689 SLC10A3P09131 477 aa6.3□□□□□ -1.4
SNHG1-202ENST00000535689 ZMYND15Q9H091 742 aa6.3□□□□□ -1.4
SNHG1-202ENST00000535689 MOXD2PA6NHM9 499 aa6.29□□□□□ -1.4
SNHG1-202ENST00000535689 C6orf229H3BNL8 230 aa6.29□□□□□ -1.4
SNHG1-202ENST00000535689 LILRB3O75022 631 aa6.29□□□□□ -1.4
SNHG1-202ENST00000535689 RFC5P40937 340 aa6.29□□□□□ -1.4
SNHG1-202ENST00000535689 PCDHB3Q9Y5E6 796 aa6.29□□□□□ -1.4
SNHG1-202ENST00000535689 FMNL1O95466 1100 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-202ENST00000535689 FUT2Q10981 343 aa6.28□□□□□ -1.4
SNHG1-202ENST00000535689 PLA2G2EQ9NZK7 142 aa6.28□□□□□ -1.4
SNHG1-202ENST00000535689 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
SNHG1-202ENST00000535689 DESI1Q6ICB0 168 aa6.27□□□□□ -1.41
SNHG1-202ENST00000535689 RETREG3Q86VR2 466 aa6.27□□□□□ -1.41
SNHG1-202ENST00000535689 PROCA1Q8NCQ7 364 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-202ENST00000535689 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
SNHG1-202ENST00000535689 NDUFV2P19404 249 aa6.26□□□□□ -1.41
SNHG1-202ENST00000535689 LIMD1Q9UGP4 676 aa6.26□□□□□ -1.41
SNHG1-202ENST00000535689 A6NJR5 290 aa6.25□□□□□ -1.41
SNHG1-202ENST00000535689 AP1G2O75843 785 aa6.25□□□□□ -1.41
SNHG1-202ENST00000535689 HRCP23327 699 aa6.25□□□□□ -1.41
SNHG1-202ENST00000535689 MORN1Q5T089 497 aa6.25□□□□□ -1.41
SNHG1-202ENST00000535689 TIMELESSQ9UNS1 1208 aa6.25□□□□□ -1.41
SNHG1-202ENST00000535689 MCM6Q14566 821 aa6.23□□□□□ -1.41
SNHG1-202ENST00000535689 ARMC2Q8NEN0 867 aa6.23□□□□□ -1.41
SNHG1-202ENST00000535689 TSC1Q92574 1164 aa6.23□□□□□ -1.41
SNHG1-202ENST00000535689 USB1Q9BQ65 265 aaKnown RBP6.23□□□□□ -1.41
SNHG1-202ENST00000535689 ZNF330Q9Y3S2 320 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-202ENST00000535689 RB1CC1Q8TDY2 1594 aa6.23□□□□□ -1.41
SNHG1-202ENST00000535689 APLP1P51693 650 aa6.22□□□□□ -1.41
SNHG1-202ENST00000535689 WASHC4Q2M389 1173 aa6.22□□□□□ -1.41
SNHG1-202ENST00000535689 SCUBE3Q8IX30 993 aa6.22□□□□□ -1.41
SNHG1-202ENST00000535689 IL21Q9HBE4 155 aa6.22□□□□□ -1.41
SNHG1-202ENST00000535689 GGCXP38435 758 aa6.21□□□□□ -1.42
SNHG1-202ENST00000535689 PRR7Q8TB68 274 aa6.21□□□□□ -1.42
SNHG1-202ENST00000535689 SLC27A5Q9Y2P5 690 aa6.21□□□□□ -1.42
SNHG1-202ENST00000535689 PCDHB15Q9Y5E8 787 aa6.21□□□□□ -1.42
SNHG1-202ENST00000535689 NDUFB9Q9Y6M9 179 aa6.21□□□□□ -1.42
SNHG1-202ENST00000535689 USP17L8P0C7I0 530 aa6.2□□□□□ -1.42
SNHG1-202ENST00000535689 QPCTQ16769 361 aa6.2□□□□□ -1.42
SNHG1-202ENST00000535689 MSS51Q4VC12 460 aa6.2□□□□□ -1.42
SNHG1-202ENST00000535689 RTL5Q5HYW3 569 aaPredicted RBP6.19□□□□□ -1.42
SNHG1-202ENST00000535689 BRICD5Q6PL45 260 aa6.19□□□□□ -1.42
SNHG1-202ENST00000535689 ZNF516Q92618 1163 aa6.19□□□□□ -1.42
SNHG1-202ENST00000535689 TRIM52Q96A61 297 aa6.19□□□□□ -1.42
SNHG1-202ENST00000535689 SPSB2Q99619 263 aa6.19□□□□□ -1.42
SNHG1-202ENST00000535689 PCDHGC3Q9UN70 934 aa6.19□□□□□ -1.42
SNHG1-202ENST00000535689 ZC3H4Q9UPT8 1303 aaKnown RBP6.19□□□□□ -1.42
SNHG1-202ENST00000535689 SOX11P35716 441 aa6.18□□□□□ -1.42
SNHG1-202ENST00000535689 COPS2P61201 443 aa6.18□□□□□ -1.42
SNHG1-202ENST00000535689 PUS10Q3MIT2 529 aaKnown RBP6.18□□□□□ -1.42
SNHG1-202ENST00000535689 PROSER2Q86WR7 435 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-202ENST00000535689 CABLES1Q8TDN4 633 aa6.18□□□□□ -1.42
SNHG1-202ENST00000535689 GPKOWQ92917 476 aaPredicted RBP eCLIP6.18□□□□□ -1.425e-32■■■■□ 19.3
SNHG1-202ENST00000535689 MTRQ99707 1265 aa6.18□□□□□ -1.42
SNHG1-202ENST00000535689 ZPR1O75312 459 aa6.17□□□□□ -1.42
SNHG1-202ENST00000535689 ITGBL1O95965 494 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-202ENST00000535689 ADH1BP00325 375 aa6.17□□□□□ -1.42
SNHG1-202ENST00000535689 JUNDP17535 347 aa6.17□□□□□ -1.42
SNHG1-202ENST00000535689 MCCD1P59942 119 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-202ENST00000535689 PTPRNQ16849 979 aa6.17□□□□□ -1.42
SNHG1-202ENST00000535689 TJAP1Q5JTD0 557 aa6.17□□□□□ -1.42
SNHG1-202ENST00000535689 LYPD8Q6UX82 237 aa6.17□□□□□ -1.42
SNHG1-202ENST00000535689 GUCA2AQ02747 115 aa6.16□□□□□ -1.42
SNHG1-202ENST00000535689 BLOC1S3Q6QNY0 202 aa6.16□□□□□ -1.42
SNHG1-202ENST00000535689 NKX2-3Q8TAU0 364 aa6.16□□□□□ -1.42
SNHG1-202ENST00000535689 TRAK2O60296 914 aa6.15□□□□□ -1.42
SNHG1-202ENST00000535689 KCNC4Q03721 635 aa6.15□□□□□ -1.42
SNHG1-202ENST00000535689 NBPF14Q5TI25 921 aa6.15□□□□□ -1.42
SNHG1-202ENST00000535689 A0A0G2JS52 829 aa6.14□□□□□ -1.43
SNHG1-202ENST00000535689 TLL1O43897 1013 aa6.14□□□□□ -1.43
SNHG1-202ENST00000535689 CTDSPL2Q05D32 466 aa6.14□□□□□ -1.43
SNHG1-202ENST00000535689 SLC6A16Q9GZN6 736 aa6.14□□□□□ -1.43
SNHG1-202ENST00000535689 SNRKQ9NRH2 765 aa6.14□□□□□ -1.43
SNHG1-202ENST00000535689 SERPINA10Q9UK55 444 aa6.14□□□□□ -1.43
SNHG1-202ENST00000535689 CFAP99D6REC4 459 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 ZBTB24O43167 697 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-202ENST00000535689 CCNYL3P0C7X3 344 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 CTHP32929 405 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 EIF4G2P78344 907 aaKnown RBP eCLIP6.13□□□□□ -1.43
SNHG1-202ENST00000535689 MTMR14Q8NCE2 650 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 THAP11Q96EK4 314 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 CCDC97Q96F63 343 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-202ENST00000535689 COG6Q9Y2V7 657 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 GPSM3Q9Y4H4 160 aa6.13□□□□□ -1.43
SNHG1-202ENST00000535689 NACADO15069 1562 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 ABL2P42684 1182 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 MMP16P51512 607 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 PDE4CQ08493 712 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 RNF19BQ6ZMZ0 732 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 HLA-CQ95604 372 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 NUDT12Q9BQG2 462 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 EVA1BQ9NVM1 165 aa6.12□□□□□ -1.43
SNHG1-202ENST00000535689 DXOO77932 396 aaKnown RBP6.11□□□□□ -1.43
SNHG1-202ENST00000535689 PTK2Q05397 1052 aa6.11□□□□□ -1.43
SNHG1-202ENST00000535689 KCNH2Q12809 1159 aa6.11□□□□□ -1.43
SNHG1-202ENST00000535689 IFFO2Q5TF58 517 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms