RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 EPRSP07814 1512 aaKnown RBP8.69□□□□□ -1.02
CHKA-208ENST00000533910 ABCA8O94911 1581 aa8.69□□□□□ -1.02
CHKA-208ENST00000533910 PHF14O94880 888 aa8.68□□□□□ -1.02
CHKA-208ENST00000533910 GIGYF2Q6Y7W6 1299 aaKnown RBP8.68□□□□□ -1.02
CHKA-208ENST00000533910 ZBED2Q9BTP6 218 aa8.68□□□□□ -1.02
CHKA-208ENST00000533910 ADAM33Q9BZ11 813 aa8.68□□□□□ -1.02
CHKA-208ENST00000533910 NUP153P49790 1475 aaKnown RBP8.68□□□□□ -1.02
CHKA-208ENST00000533910 ARHGEF11O15085 1522 aa8.68□□□□□ -1.02
CHKA-208ENST00000533910 SUPT6HQ7KZ85 1726 aaKnown RBP8.68□□□□□ -1.02
CHKA-208ENST00000533910 GOLGA8CPA6NN73 597 aa8.67□□□□□ -1.02
CHKA-208ENST00000533910 MAGI3Q5TCQ9 1506 aa8.67□□□□□ -1.02
CHKA-208ENST00000533910 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
CHKA-208ENST00000533910 MRPL50Q8N5N7 158 aaKnown RBP8.66□□□□□ -1.02
CHKA-208ENST00000533910 EPAS1Q99814 870 aa8.66□□□□□ -1.02
CHKA-208ENST00000533910 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
CHKA-208ENST00000533910 CDK13Q14004 1512 aaKnown RBP8.65□□□□□ -1.02
CHKA-208ENST00000533910 PRG4Q92954 1404 aaPredicted RBP8.65□□□□□ -1.02
CHKA-208ENST00000533910 BHMG1C9JSJ3 638 aaPredicted RBP8.65□□□□□ -1.02
CHKA-208ENST00000533910 MDM2Q00987 491 aaPredicted RBP8.65□□□□□ -1.02
CHKA-208ENST00000533910 DDRGK1Q96HY6 314 aa8.65□□□□□ -1.02
CHKA-208ENST00000533910 ADCY10Q96PN6 1610 aa8.65□□□□□ -1.03
CHKA-208ENST00000533910 PLB1Q6P1J6 1458 aa8.64□□□□□ -1.03
CHKA-208ENST00000533910 PPP1R3GB7ZBB8 358 aa8.64□□□□□ -1.03
CHKA-208ENST00000533910 TYW1BQ6NUM6 668 aa8.64□□□□□ -1.03
CHKA-208ENST00000533910 ERCC6L2Q5T890 1561 aa8.64□□□□□ -1.03
CHKA-208ENST00000533910 PHLDB1Q86UU1 1377 aa8.63□□□□□ -1.03
CHKA-208ENST00000533910 MYT1Q01538 1121 aa8.63□□□□□ -1.03
CHKA-208ENST00000533910 NCOA2Q15596 1464 aa8.63□□□□□ -1.03
CHKA-208ENST00000533910 CCNB3Q8WWL7 1395 aa8.62□□□□□ -1.03
CHKA-208ENST00000533910 PTPN5P54829 565 aa8.62□□□□□ -1.03
CHKA-208ENST00000533910 ZMYND15Q9H091 742 aa8.62□□□□□ -1.03
CHKA-208ENST00000533910 MTUS2Q5JR59 1369 aa8.61□□□□□ -1.03
CHKA-208ENST00000533910 PADI6Q6TGC4 694 aa8.61□□□□□ -1.03
CHKA-208ENST00000533910 WNT2BQ93097 391 aa8.61□□□□□ -1.03
CHKA-208ENST00000533910 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
CHKA-208ENST00000533910 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHKA-208ENST00000533910 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
CHKA-208ENST00000533910 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
CHKA-208ENST00000533910 MYOM3Q5VTT5 1437 aa8.6□□□□□ -1.03
CHKA-208ENST00000533910 FGD6Q6ZV73 1430 aa8.6□□□□□ -1.03
CHKA-208ENST00000533910 ABCC2Q92887 1545 aa8.59□□□□□ -1.03
CHKA-208ENST00000533910 SSTR3P32745 418 aaPredicted RBP8.59□□□□□ -1.03
CHKA-208ENST00000533910 RABGEF1Q9UJ41 708 aa8.59□□□□□ -1.03
CHKA-208ENST00000533910 ITSN2Q9NZM3 1697 aa8.59□□□□□ -1.03
CHKA-208ENST00000533910 PTPN23Q9H3S7 1636 aa8.58□□□□□ -1.04
CHKA-208ENST00000533910 PTPRGP23470 1445 aa8.58□□□□□ -1.04
CHKA-208ENST00000533910 TROQ12816 1431 aaPredicted RBP8.58□□□□□ -1.04
CHKA-208ENST00000533910 HRCP23327 699 aa8.58□□□□□ -1.04
CHKA-208ENST00000533910 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
CHKA-208ENST00000533910 KIF14Q15058 1648 aa8.58□□□□□ -1.04
CHKA-208ENST00000533910 UHRF1BP1LA0JNW5 1464 aa8.57□□□□□ -1.04
CHKA-208ENST00000533910 TCOF1Q13428 1488 aaKnown RBP8.57□□□□□ -1.04
CHKA-208ENST00000533910 UACAQ9BZF9 1416 aa8.57□□□□□ -1.04
CHKA-208ENST00000533910 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
CHKA-208ENST00000533910 ATP10BO94823 1461 aa8.57□□□□□ -1.04
CHKA-208ENST00000533910 COL9A1P20849 921 aa8.56□□□□□ -1.04
CHKA-208ENST00000533910 CLCN1P35523 988 aa8.56□□□□□ -1.04
CHKA-208ENST00000533910 METTL3Q86U44 580 aaKnown RBP8.56□□□□□ -1.04
CHKA-208ENST00000533910 PROCA1Q8NCQ7 364 aaPredicted RBP8.56□□□□□ -1.04
CHKA-208ENST00000533910 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
CHKA-208ENST00000533910 MIA2Q96PC5 1412 aa8.55□□□□□ -1.04
CHKA-208ENST00000533910 ONECUT3O60422 494 aaPredicted RBP8.55□□□□□ -1.04
CHKA-208ENST00000533910 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
CHKA-208ENST00000533910 LAPTM4BQ86VI4 370 aa8.55□□□□□ -1.04
CHKA-208ENST00000533910 HOMEZQ8IX15 550 aa8.55□□□□□ -1.04
CHKA-208ENST00000533910 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
CHKA-208ENST00000533910 BEGAINQ9BUH8 593 aa8.55□□□□□ -1.04
CHKA-208ENST00000533910 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
CHKA-208ENST00000533910 CDC42BPAQ5VT25 1732 aa8.54□□□□□ -1.04
CHKA-208ENST00000533910 ARID3CA6NKF2 412 aa8.54□□□□□ -1.04
CHKA-208ENST00000533910 PCMTD1Q96MG8 357 aaPredicted RBP8.54□□□□□ -1.04
CHKA-208ENST00000533910 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
CHKA-208ENST00000533910 FAM198AQ9UFP1 575 aa8.54□□□□□ -1.04
CHKA-208ENST00000533910 KDM5BQ9UGL1 1544 aa8.54□□□□□ -1.04
CHKA-208ENST00000533910 ABCC10Q5T3U5 1492 aa8.53□□□□□ -1.04
CHKA-208ENST00000533910 PXYLP1Q8TE99 480 aa8.53□□□□□ -1.04
CHKA-208ENST00000533910 ARID3AQ99856 593 aa8.53□□□□□ -1.04
CHKA-208ENST00000533910 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
CHKA-208ENST00000533910 FAM217BQ9NTX9 383 aaPredicted RBP8.53□□□□□ -1.04
CHKA-208ENST00000533910 C3orf80F5H4A9 247 aa8.52□□□□□ -1.05
CHKA-208ENST00000533910 IFFO2Q5TF58 517 aa8.52□□□□□ -1.05
CHKA-208ENST00000533910 C1orf115Q9H7X2 142 aa8.52□□□□□ -1.05
CHKA-208ENST00000533910 KIAA1468Q9P260 1216 aa8.52□□□□□ -1.05
CHKA-208ENST00000533910 CDK11AQ9UQ88 783 aaPredicted RBP8.52□□□□□ -1.05
CHKA-208ENST00000533910 GCC2Q8IWJ2 1684 aa8.52□□□□□ -1.05
CHKA-208ENST00000533910 DNMT1P26358 1616 aaKnown RBP8.51□□□□□ -1.05
CHKA-208ENST00000533910 PREX2Q70Z35 1606 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 CROCC2H7BZ55 1655 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 SH3D19Q5HYK7 790 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 CLUAP1Q96AJ1 413 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 CDCA7LQ96GN5 454 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
CHKA-208ENST00000533910 GPATCH8Q9UKJ3 1502 aaKnown RBP8.5□□□□□ -1.05
CHKA-208ENST00000533910 OATP04181 439 aa8.5□□□□□ -1.05
CHKA-208ENST00000533910 PRSS12P56730 875 aa8.5□□□□□ -1.05
CHKA-208ENST00000533910 AKNAQ7Z591 1439 aa8.5□□□□□ -1.05
CHKA-208ENST00000533910 TTC37Q6PGP7 1564 aa8.49□□□□□ -1.05
CHKA-208ENST00000533910 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
CHKA-208ENST00000533910 FBXO31Q5XUX0 539 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms