RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CLK2P49760 499 aaKnown RBP6.08□□□□□ -1.44
ATM-220ENST00000533526 PRPF38BQ5VTL8 546 aaKnown RBP6.08□□□□□ -1.44
ATM-220ENST00000533526 C6orf229H3BNL8 230 aa6.07□□□□□ -1.44
ATM-220ENST00000533526 GUCA2AQ02747 115 aa6.07□□□□□ -1.44
ATM-220ENST00000533526 MTMR2Q13614 643 aa6.07□□□□□ -1.44
ATM-220ENST00000533526 RETREG3Q86VR2 466 aa6.07□□□□□ -1.44
ATM-220ENST00000533526 USB1Q9BQ65 265 aaKnown RBP6.07□□□□□ -1.44
ATM-220ENST00000533526 POLR3EQ9NVU0 708 aa6.07□□□□□ -1.44
ATM-220ENST00000533526 ATP1B4Q9UN42 357 aaPredicted RBP6.07□□□□□ -1.44
ATM-220ENST00000533526 MSS51Q4VC12 460 aa6.06□□□□□ -1.44
ATM-220ENST00000533526 NKX2-3Q8TAU0 364 aa6.06□□□□□ -1.44
ATM-220ENST00000533526 HLA-CQ95604 372 aa6.06□□□□□ -1.44
ATM-220ENST00000533526 PCMTD1Q96MG8 357 aaPredicted RBP6.06□□□□□ -1.44
ATM-220ENST00000533526 SLC6A16Q9GZN6 736 aa6.06□□□□□ -1.44
ATM-220ENST00000533526 ZBTB3Q9H5J0 574 aa6.06□□□□□ -1.44
ATM-220ENST00000533526 PCDHGC3Q9UN70 934 aa6.06□□□□□ -1.44
ATM-220ENST00000533526 RNF19BQ6ZMZ0 732 aa6.05□□□□□ -1.44
ATM-220ENST00000533526 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.05□□□□□ -1.44
ATM-220ENST00000533526 LIMD1Q9UGP4 676 aa6.05□□□□□ -1.44
ATM-220ENST00000533526 PCDHB15Q9Y5E8 787 aa6.05□□□□□ -1.44
ATM-220ENST00000533526 A0A0G2JS52 829 aa6.04□□□□□ -1.44
ATM-220ENST00000533526 NUTM2BA6NNL0 878 aaPredicted RBP6.04□□□□□ -1.44
ATM-220ENST00000533526 NUTM2EB1AL46 878 aaPredicted RBP6.04□□□□□ -1.44
ATM-220ENST00000533526 TLL1O43897 1013 aa6.04□□□□□ -1.44
ATM-220ENST00000533526 LILRB3O75022 631 aa6.04□□□□□ -1.44
ATM-220ENST00000533526 HRCP23327 699 aa6.04□□□□□ -1.44
ATM-220ENST00000533526 NUTM2DQ5VT03 806 aaPredicted RBP6.04□□□□□ -1.44
ATM-220ENST00000533526 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
ATM-220ENST00000533526 NUTM2AQ8IVF1 878 aaPredicted RBP6.04□□□□□ -1.44
ATM-220ENST00000533526 FAM160A2Q8N612 972 aaPredicted RBP6.04□□□□□ -1.44
ATM-220ENST00000533526 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-220ENST00000533526 CSPP1Q1MSJ5 1256 aa6.03□□□□□ -1.44
ATM-220ENST00000533526 DESI1Q6ICB0 168 aa6.03□□□□□ -1.44
ATM-220ENST00000533526 SYMPKQ92797 1274 aaKnown RBP6.03□□□□□ -1.44
ATM-220ENST00000533526 RGS20O76081 388 aa6.02□□□□□ -1.45
ATM-220ENST00000533526 S1PR4O95977 384 aa6.02□□□□□ -1.45
ATM-220ENST00000533526 MMP16P51512 607 aa6.02□□□□□ -1.45
ATM-220ENST00000533526 TMEM132AQ24JP5 1023 aa6.02□□□□□ -1.45
ATM-220ENST00000533526 PPP2R2DQ66LE6 453 aa6.02□□□□□ -1.45
ATM-220ENST00000533526 PROCA1Q8NCQ7 364 aaPredicted RBP6.02□□□□□ -1.45
ATM-220ENST00000533526 PRR7Q8TB68 274 aa6.02□□□□□ -1.45
ATM-220ENST00000533526 JUNDP17535 347 aa6.01□□□□□ -1.45
ATM-220ENST00000533526 QPCTQ16769 361 aa6.01□□□□□ -1.45
ATM-220ENST00000533526 ANKLE1Q8NAG6 615 aa6.01□□□□□ -1.45
ATM-220ENST00000533526 RNF223E7ERA6 249 aa6□□□□□ -1.45
ATM-220ENST00000533526 DXOO77932 396 aaKnown RBP6□□□□□ -1.45
ATM-220ENST00000533526 HELBQ8NG08 1087 aaPredicted RBP6□□□□□ -1.45
ATM-220ENST00000533526 CABLES1Q8TDN4 633 aa6□□□□□ -1.45
ATM-220ENST00000533526 TMEM259Q4ZIN3 620 aa5.99□□□□□ -1.45
ATM-220ENST00000533526 RTL5Q5HYW3 569 aaPredicted RBP5.99□□□□□ -1.45
ATM-220ENST00000533526 CFAP99D6REC4 459 aa5.98□□□□□ -1.45
ATM-220ENST00000533526 PTPRNQ16849 979 aa5.98□□□□□ -1.45
ATM-220ENST00000533526 LYPD8Q6UX82 237 aa5.98□□□□□ -1.45
ATM-220ENST00000533526 PPEF1O14829 653 aaPredicted RBP5.97□□□□□ -1.45
ATM-220ENST00000533526 ZBTB24O43167 697 aaPredicted RBP5.97□□□□□ -1.45
ATM-220ENST00000533526 PRDM9Q9NQV7 894 aa5.97□□□□□ -1.45
ATM-220ENST00000533526 FCF1Q9Y324 198 aaKnown RBP5.97□□□□□ -1.45
ATM-220ENST00000533526 CCNYL3P0C7X3 344 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 RFC5P40937 340 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 RPIAP49247 311 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 CCDC24Q8N4L8 307 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 TSC1Q92574 1164 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 NUDT12Q9BQG2 462 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 EVA1BQ9NVM1 165 aa5.96□□□□□ -1.46
ATM-220ENST00000533526 V9GY48 417 aaPredicted RBP5.96□□□□□ -1.46
ATM-220ENST00000533526 CD2BP2O95400 341 aaKnown RBP5.95□□□□□ -1.46
ATM-220ENST00000533526 SLC19A1P41440 591 aa5.95□□□□□ -1.46
ATM-220ENST00000533526 BANK1Q8NDB2 785 aa5.95□□□□□ -1.46
ATM-220ENST00000533526 AP1G2O75843 785 aa5.94□□□□□ -1.46
ATM-220ENST00000533526 KCNH2Q12809 1159 aa5.94□□□□□ -1.46
ATM-220ENST00000533526 PRKD2Q9BZL6 878 aa5.94□□□□□ -1.46
ATM-220ENST00000533526 CTDSPL2Q05D32 466 aa5.93□□□□□ -1.46
ATM-220ENST00000533526 FBXO31Q5XUX0 539 aaPredicted RBP5.93□□□□□ -1.46
ATM-220ENST00000533526 CTHP32929 405 aa5.92□□□□□ -1.46
ATM-220ENST00000533526 PLA2G2CQ5R387 149 aa5.92□□□□□ -1.46
ATM-220ENST00000533526 SPRYD7Q5W111 196 aa5.92□□□□□ -1.46
ATM-220ENST00000533526 ARMC2Q8NEN0 867 aa5.92□□□□□ -1.46
ATM-220ENST00000533526 LIAT1Q6ZQX7 453 aa5.91□□□□□ -1.46
ATM-220ENST00000533526 ZNF598Q86UK7 904 aaKnown RBP5.91□□□□□ -1.46
ATM-220ENST00000533526 APBB1O00213 710 aa5.9□□□□□ -1.46
ATM-220ENST00000533526 SOCS7O14512 581 aa5.9□□□□□ -1.46
ATM-220ENST00000533526 PER1O15534 1290 aaPredicted RBP5.9□□□□□ -1.46
ATM-220ENST00000533526 F12P00748 615 aaPredicted RBP5.9□□□□□ -1.46
ATM-220ENST00000533526 PNMA1Q8ND90 353 aa5.9□□□□□ -1.46
ATM-220ENST00000533526 UNC93B1Q9H1C4 597 aa5.9□□□□□ -1.46
ATM-220ENST00000533526 USP17L8P0C7I0 530 aa5.89□□□□□ -1.47
ATM-220ENST00000533526 TRIM32Q13049 653 aa5.89□□□□□ -1.47
ATM-220ENST00000533526 PTCRAQ6ISU1 281 aaPredicted RBP5.89□□□□□ -1.47
ATM-220ENST00000533526 WNT7BP56706 349 aa5.88□□□□□ -1.47
ATM-220ENST00000533526 LRRN4Q8WUT4 740 aa5.88□□□□□ -1.47
ATM-220ENST00000533526 GPKOWQ92917 476 aaPredicted RBP eCLIP5.88□□□□□ -1.47
ATM-220ENST00000533526 EMID1Q96A84 441 aaPredicted RBP5.88□□□□□ -1.47
ATM-220ENST00000533526 PRM3Q9NNZ6 103 aa5.88□□□□□ -1.47
ATM-220ENST00000533526 ZNF697Q5TEC3 545 aa5.87□□□□□ -1.47
ATM-220ENST00000533526 MAP10Q9P2G4 905 aa5.87□□□□□ -1.47
ATM-220ENST00000533526 ZC3H4Q9UPT8 1303 aaKnown RBP5.86□□□□□ -1.47
ATM-220ENST00000533526 FLIIQ13045 1269 aa5.86□□□□□ -1.47
ATM-220ENST00000533526 NR6A1Q15406 480 aa5.86□□□□□ -1.47
ATM-220ENST00000533526 NBPF14Q5TI25 921 aa5.86□□□□□ -1.47
ATM-220ENST00000533526 BAP1Q92560 729 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms