RNA–Protein interactions for RNA: ENST00000533296.5

SAMD3-215, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best)

Gene SAMD3, Length 1,436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-215ENST00000533296 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
SAMD3-215ENST00000533296 CHIC2Q9UKJ5 165 aa12.7□□□□□ -0.38
SAMD3-215ENST00000533296 CLASP1Q7Z460 1538 aa12.69□□□□□ -0.38
SAMD3-215ENST00000533296 ABCC2Q92887 1545 aa12.69□□□□□ -0.38
SAMD3-215ENST00000533296 ZNF644Q9H582 1327 aaPredicted RBP12.69□□□□□ -0.38
SAMD3-215ENST00000533296 GRXCR2A6NFK2 248 aa12.69□□□□□ -0.38
SAMD3-215ENST00000533296 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
SAMD3-215ENST00000533296 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
SAMD3-215ENST00000533296 NBR1Q14596 966 aa12.69□□□□□ -0.38
SAMD3-215ENST00000533296 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
SAMD3-215ENST00000533296 TESPA1A2RU30 521 aaPredicted RBP12.68□□□□□ -0.38
SAMD3-215ENST00000533296 PTPREP23469 700 aa12.68□□□□□ -0.38
SAMD3-215ENST00000533296 PSEN2P49810 448 aa12.68□□□□□ -0.38
SAMD3-215ENST00000533296 LSM11P83369 360 aaKnown RBP eCLIP12.68□□□□□ -0.38
SAMD3-215ENST00000533296 PZPP20742 1482 aa12.68□□□□□ -0.38
SAMD3-215ENST00000533296 MBD5Q9P267 1494 aa12.68□□□□□ -0.38
SAMD3-215ENST00000533296 MAST1Q9Y2H9 1570 aa12.67□□□□□ -0.38
SAMD3-215ENST00000533296 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
SAMD3-215ENST00000533296 PLEKHH2Q8IVE3 1493 aa12.66□□□□□ -0.38
SAMD3-215ENST00000533296 TEX14Q8IWB6 1497 aa12.66□□□□□ -0.38
SAMD3-215ENST00000533296 C6orf132Q5T0Z8 1188 aa12.66□□□□□ -0.38
SAMD3-215ENST00000533296 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
SAMD3-215ENST00000533296 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
SAMD3-215ENST00000533296 ARID3CA6NKF2 412 aa12.65□□□□□ -0.38
SAMD3-215ENST00000533296 DMRTA1Q5VZB9 504 aa12.65□□□□□ -0.38
SAMD3-215ENST00000533296 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
SAMD3-215ENST00000533296 C9orf84Q5VXU9 1444 aa12.65□□□□□ -0.38
SAMD3-215ENST00000533296 CCER2I3L3R5 266 aa12.64□□□□□ -0.39
SAMD3-215ENST00000533296 CDC42BPBQ9Y5S2 1711 aa12.64□□□□□ -0.39
SAMD3-215ENST00000533296 CCDC141Q6ZP82 1450 aa12.63□□□□□ -0.39
SAMD3-215ENST00000533296 ARAP3Q8WWN8 1544 aa12.63□□□□□ -0.39
SAMD3-215ENST00000533296 SLC4A5Q9BY07 1137 aa12.62□□□□□ -0.39
SAMD3-215ENST00000533296 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
SAMD3-215ENST00000533296 TK2O00142 265 aa12.62□□□□□ -0.39
SAMD3-215ENST00000533296 TSPY4P0CV99 314 aa12.62□□□□□ -0.39
SAMD3-215ENST00000533296 TSPY10P0CW01 314 aa12.62□□□□□ -0.39
SAMD3-215ENST00000533296 RBM33Q96EV2 1170 aaKnown RBP12.62□□□□□ -0.39
SAMD3-215ENST00000533296 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
SAMD3-215ENST00000533296 SAMD9LQ8IVG5 1584 aa12.61□□□□□ -0.39
SAMD3-215ENST00000533296 MAP3K7O43318 606 aa12.6□□□□□ -0.39
SAMD3-215ENST00000533296 COL9A1P20849 921 aa12.6□□□□□ -0.39
SAMD3-215ENST00000533296 TSR1Q2NL82 804 aaKnown RBP12.6□□□□□ -0.39
SAMD3-215ENST00000533296 L3MBTL2Q969R5 705 aa12.6□□□□□ -0.39
SAMD3-215ENST00000533296 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
SAMD3-215ENST00000533296 GTF3C3Q9Y5Q9 886 aa12.6□□□□□ -0.39
SAMD3-215ENST00000533296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
SAMD3-215ENST00000533296 ARHGEF12Q9NZN5 1544 aa12.59□□□□□ -0.39
SAMD3-215ENST00000533296 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
SAMD3-215ENST00000533296 PLXNC1O60486 1568 aa12.59□□□□□ -0.39
SAMD3-215ENST00000533296 MYO5CQ9NQX4 1742 aa12.59□□□□□ -0.39
SAMD3-215ENST00000533296 EIF4G2P78344 907 aaKnown RBP eCLIP12.58□□□□□ -0.4
SAMD3-215ENST00000533296 SPNS2Q8IVW8 549 aa12.58□□□□□ -0.4
SAMD3-215ENST00000533296 UHRF1BP1Q6BDS2 1440 aa12.58□□□□□ -0.4
SAMD3-215ENST00000533296 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
SAMD3-215ENST00000533296 DDX10Q13206 875 aaKnown RBP12.57□□□□□ -0.4
SAMD3-215ENST00000533296 ADGRD1Q6QNK2 874 aa12.57□□□□□ -0.4
SAMD3-215ENST00000533296 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
SAMD3-215ENST00000533296 KIF15Q9NS87 1388 aa12.57□□□□□ -0.4
SAMD3-215ENST00000533296 VPS9D1Q9Y2B5 631 aa12.56□□□□□ -0.4
SAMD3-215ENST00000533296 PLCH2O75038 1416 aa12.56□□□□□ -0.4
SAMD3-215ENST00000533296 TTC37Q6PGP7 1564 aa12.56□□□□□ -0.4
SAMD3-215ENST00000533296 POLR1AO95602 1720 aaPredicted RBP12.56□□□□□ -0.4
SAMD3-215ENST00000533296 HRO43593 1189 aa12.55□□□□□ -0.4
SAMD3-215ENST00000533296 SMYD5Q6GMV2 418 aa12.55□□□□□ -0.4
SAMD3-215ENST00000533296 ERCC6L2Q5T890 1561 aa12.55□□□□□ -0.4
SAMD3-215ENST00000533296 UNC13BO14795 1591 aa12.55□□□□□ -0.4
SAMD3-215ENST00000533296 ZNF777Q9ULD5 760 aaPredicted RBP12.54□□□□□ -0.4
SAMD3-215ENST00000533296 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
SAMD3-215ENST00000533296 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
SAMD3-215ENST00000533296 ANP32CO43423 234 aa12.54□□□□□ -0.4
SAMD3-215ENST00000533296 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
SAMD3-215ENST00000533296 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
SAMD3-215ENST00000533296 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
SAMD3-215ENST00000533296 ATP10AO60312 1499 aa12.53□□□□□ -0.4
SAMD3-215ENST00000533296 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
SAMD3-215ENST00000533296 NUP155O75694 1391 aa12.53□□□□□ -0.4
SAMD3-215ENST00000533296 CERKQ8TCT0 537 aa12.53□□□□□ -0.4
SAMD3-215ENST00000533296 ARHGAP5Q13017 1502 aa12.52□□□□□ -0.4
SAMD3-215ENST00000533296 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
SAMD3-215ENST00000533296 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
SAMD3-215ENST00000533296 DUOX2Q9NRD8 1548 aa12.52□□□□□ -0.41
SAMD3-215ENST00000533296 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
SAMD3-215ENST00000533296 BHMG1C9JSJ3 638 aaPredicted RBP12.51□□□□□ -0.41
SAMD3-215ENST00000533296 SYCP2Q9BX26 1530 aa12.51□□□□□ -0.41
SAMD3-215ENST00000533296 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
SAMD3-215ENST00000533296 WASHC2AQ641Q2 1341 aa12.5□□□□□ -0.41
SAMD3-215ENST00000533296 FAM135AQ9P2D6 1515 aa12.5□□□□□ -0.41
SAMD3-215ENST00000533296 IQGAP3Q86VI3 1631 aa12.5□□□□□ -0.41
SAMD3-215ENST00000533296 ABCC1P33527 1531 aa12.49□□□□□ -0.41
SAMD3-215ENST00000533296 HNRNPMP52272 730 aaKnown RBP eCLIP12.49□□□□□ -0.41
SAMD3-215ENST00000533296 PROX2Q3B8N5 592 aa12.49□□□□□ -0.41
SAMD3-215ENST00000533296 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
SAMD3-215ENST00000533296 EFCAB2Q5VUJ9 269 aa12.49□□□□□ -0.41
SAMD3-215ENST00000533296 RALGAPBQ86X10 1494 aa12.48□□□□□ -0.41
SAMD3-215ENST00000533296 NBPF8Q3BBV2 869 aa12.48□□□□□ -0.41
SAMD3-215ENST00000533296 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
SAMD3-215ENST00000533296 CCDC7Q96M83 1385 aa12.48□□□□□ -0.41
SAMD3-215ENST00000533296 WDR7Q9Y4E6 1490 aa12.48□□□□□ -0.41
SAMD3-215ENST00000533296 PTGDRQ13258 359 aa12.47□□□□□ -0.41
SAMD3-215ENST00000533296 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms