RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
NXF1-213ENST00000532297 TRMT2AQ8IZ69 625 aaKnown RBP19.08■□□□□ 0.65
NXF1-213ENST00000532297 BECN1Q14457 450 aa19.08■□□□□ 0.64
NXF1-213ENST00000532297 COG6Q9Y2V7 657 aa19.08■□□□□ 0.64
NXF1-213ENST00000532297 NPC1L1Q9UHC9 1359 aa19.07■□□□□ 0.64
NXF1-213ENST00000532297 ASXL2Q76L83 1435 aa19.07■□□□□ 0.64
NXF1-213ENST00000532297 KIAA1210Q9ULL0 1709 aa19.07■□□□□ 0.64
NXF1-213ENST00000532297 CENPJQ9HC77 1338 aaPredicted RBP19.06■□□□□ 0.64
NXF1-213ENST00000532297 SEC24BO95487 1268 aa19.05■□□□□ 0.64
NXF1-213ENST00000532297 MYOM2P54296 1465 aa19.05■□□□□ 0.64
NXF1-213ENST00000532297 VIRMAQ69YN4 1812 aaKnown RBP19.05■□□□□ 0.64
NXF1-213ENST00000532297 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
NXF1-213ENST00000532297 ARAP3Q8WWN8 1544 aa19.04■□□□□ 0.64
NXF1-213ENST00000532297 CANXP27824 592 aaKnown RBP19.04■□□□□ 0.64
NXF1-213ENST00000532297 WWC1Q8IX03 1113 aa19.04■□□□□ 0.64
NXF1-213ENST00000532297 SHPRHQ149N8 1683 aa19.04■□□□□ 0.64
NXF1-213ENST00000532297 SLC24A1O60721 1099 aa19.04■□□□□ 0.64
NXF1-213ENST00000532297 ARXQ96QS3 562 aa19.04■□□□□ 0.64
NXF1-213ENST00000532297 QRICH2Q9H0J4 1663 aa19.03■□□□□ 0.64
NXF1-213ENST00000532297 E9PSI1 815 aa19.02■□□□□ 0.64
NXF1-213ENST00000532297 NPATQ14207 1427 aa19.01■□□□□ 0.63
NXF1-213ENST00000532297 CLUAP1Q96AJ1 413 aa19.01■□□□□ 0.63
NXF1-213ENST00000532297 GLIPR1L2Q4G1C9 344 aa19■□□□□ 0.63
NXF1-213ENST00000532297 RLBP1P12271 317 aa18.99■□□□□ 0.63
NXF1-213ENST00000532297 ADGRB3O60242 1522 aa18.99■□□□□ 0.63
NXF1-213ENST00000532297 MTHFSP49914 203 aa18.99■□□□□ 0.63
NXF1-213ENST00000532297 TCP11L2Q8N4U5 519 aa18.99■□□□□ 0.63
NXF1-213ENST00000532297 PKNOX2Q96KN3 472 aa18.98■□□□□ 0.63
NXF1-213ENST00000532297 NAP1L5Q96NT1 182 aaPredicted RBP18.98■□□□□ 0.63
NXF1-213ENST00000532297 ANTXR1Q9H6X2 564 aa18.98■□□□□ 0.63
NXF1-213ENST00000532297 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
NXF1-213ENST00000532297 MAPK8IP3Q9UPT6 1336 aa18.98■□□□□ 0.63
NXF1-213ENST00000532297 CABP2Q9NPB3 220 aa18.98■□□□□ 0.63
NXF1-213ENST00000532297 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
NXF1-213ENST00000532297 MYO3AQ8NEV4 1616 aa18.97■□□□□ 0.63
NXF1-213ENST00000532297 PPLO60437 1756 aa18.97■□□□□ 0.63
NXF1-213ENST00000532297 STK26Q9P289 416 aa18.97■□□□□ 0.63
NXF1-213ENST00000532297 NRXN1Q9ULB1 1477 aa18.96■□□□□ 0.63
NXF1-213ENST00000532297 RAPGEF3O95398 923 aa18.96■□□□□ 0.63
NXF1-213ENST00000532297 XRCC6P12956 609 aaKnown RBP eCLIP18.96■□□□□ 0.63
NXF1-213ENST00000532297 GOLGA6L3A6NEY3 463 aa18.96■□□□□ 0.63
NXF1-213ENST00000532297 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
NXF1-213ENST00000532297 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
NXF1-213ENST00000532297 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
NXF1-213ENST00000532297 SIGLEC1Q9BZZ2 1709 aa18.95■□□□□ 0.62
NXF1-213ENST00000532297 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
NXF1-213ENST00000532297 NLRP1Q9C000 1473 aa18.94■□□□□ 0.62
NXF1-213ENST00000532297 NGEFQ8N5V2 710 aa18.94■□□□□ 0.62
NXF1-213ENST00000532297 NEURL4Q96JN8 1562 aa18.93■□□□□ 0.62
NXF1-213ENST00000532297 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
NXF1-213ENST00000532297 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
NXF1-213ENST00000532297 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
NXF1-213ENST00000532297 TSR2Q969E8 191 aaKnown RBP18.92■□□□□ 0.62
NXF1-213ENST00000532297 GZF1Q9H116 711 aaPredicted RBP18.92■□□□□ 0.62
NXF1-213ENST00000532297 PCDHB15Q9Y5E8 787 aa18.92■□□□□ 0.62
NXF1-213ENST00000532297 RARSP54136 660 aaKnown RBP18.92■□□□□ 0.62
NXF1-213ENST00000532297 PANK2Q9BZ23 570 aa18.92■□□□□ 0.62
NXF1-213ENST00000532297 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
NXF1-213ENST00000532297 RUNDC1Q96C34 613 aa18.91■□□□□ 0.62
NXF1-213ENST00000532297 TBC1D2Q9BYX2 928 aa18.91■□□□□ 0.62
NXF1-213ENST00000532297 U2AF1L5P0DN76 240 aaPredicted RBP18.91■□□□□ 0.62
NXF1-213ENST00000532297 CLCN1P35523 988 aa18.91■□□□□ 0.62
NXF1-213ENST00000532297 U2AF1Q01081 240 aaKnown RBP eCLIP18.91■□□□□ 0.625e-8■■■□□ 16.5
NXF1-213ENST00000532297 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
NXF1-213ENST00000532297 GLI2P10070 1586 aa18.9■□□□□ 0.62
NXF1-213ENST00000532297 FSD2A1L4K1 749 aa18.9■□□□□ 0.62
NXF1-213ENST00000532297 SPRYD3Q8NCJ5 442 aa18.9■□□□□ 0.62
NXF1-213ENST00000532297 PDE3AQ14432 1141 aa18.89■□□□□ 0.62
NXF1-213ENST00000532297 GGNBP2Q9H3C7 697 aa18.89■□□□□ 0.62
NXF1-213ENST00000532297 VSIG10Q8N0Z9 540 aa18.89■□□□□ 0.61
NXF1-213ENST00000532297 TBC1D32Q96NH3 1257 aa18.89■□□□□ 0.61
NXF1-213ENST00000532297 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
NXF1-213ENST00000532297 HSP90AA2PQ14568 343 aaPredicted RBP18.88■□□□□ 0.61
NXF1-213ENST00000532297 SBNO2Q9Y2G9 1366 aa18.88■□□□□ 0.61
NXF1-213ENST00000532297 CD109Q6YHK3 1445 aa18.88■□□□□ 0.61
NXF1-213ENST00000532297 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
NXF1-213ENST00000532297 MCM4P33991 863 aa18.87■□□□□ 0.61
NXF1-213ENST00000532297 POGZQ7Z3K3 1410 aa18.87■□□□□ 0.61
NXF1-213ENST00000532297 CAMSAP1Q5T5Y3 1602 aa18.87■□□□□ 0.61
NXF1-213ENST00000532297 U2SURPO15042 1029 aaKnown RBP18.87■□□□□ 0.61
NXF1-213ENST00000532297 LMTK2Q8IWU2 1503 aa18.87■□□□□ 0.61
NXF1-213ENST00000532297 ARHGEF28Q8N1W1 1705 aaKnown RBP18.86■□□□□ 0.61
NXF1-213ENST00000532297 ABCC3O15438 1527 aa18.86■□□□□ 0.61
NXF1-213ENST00000532297 FBLN1P23142 703 aa18.86■□□□□ 0.61
NXF1-213ENST00000532297 HECW2Q9P2P5 1572 aa18.85■□□□□ 0.61
NXF1-213ENST00000532297 MINK1Q8N4C8 1332 aaPredicted RBP18.85■□□□□ 0.61
NXF1-213ENST00000532297 MYO5BQ9ULV0 1848 aa18.85■□□□□ 0.61
NXF1-213ENST00000532297 ZMYND15Q9H091 742 aa18.84■□□□□ 0.61
NXF1-213ENST00000532297 RRP9O43818 475 aaKnown RBP18.83■□□□□ 0.61
NXF1-213ENST00000532297 SRPK2P78362 688 aaKnown RBP18.83■□□□□ 0.61
NXF1-213ENST00000532297 NINLQ9Y2I6 1382 aa18.83■□□□□ 0.6
NXF1-213ENST00000532297 NPM1P06748 294 aaKnown RBP eCLIP18.82■□□□□ 0.6
NXF1-213ENST00000532297 A0A1W2PP64 1363 aa18.82■□□□□ 0.6
NXF1-213ENST00000532297 TRAK2O60296 914 aa18.82■□□□□ 0.6
NXF1-213ENST00000532297 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
NXF1-213ENST00000532297 PDZRN3Q9UPQ7 1066 aa18.82■□□□□ 0.6
NXF1-213ENST00000532297 IDI1Q13907 227 aa18.81■□□□□ 0.6
NXF1-213ENST00000532297 PMFBP1Q8TBY8 1022 aa18.81■□□□□ 0.6
NXF1-213ENST00000532297 EVC2Q86UK5 1308 aa18.81■□□□□ 0.6
NXF1-213ENST00000532297 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms