RNA–Protein interactions for RNA: ENST00000531884.1

KCNMB4-202, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 4, humanhuman

TSL 2

Gene KCNMB4, Length 472 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB4-202ENST00000531884 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
KCNMB4-202ENST00000531884 FUT2Q10981 343 aa13.78□□□□□ -0.2
KCNMB4-202ENST00000531884 KMT5BQ4FZB7 885 aa13.78□□□□□ -0.2
KCNMB4-202ENST00000531884 NECTIN2Q92692 538 aa13.78□□□□□ -0.2
KCNMB4-202ENST00000531884 HLA-CQ95604 372 aa13.78□□□□□ -0.2
KCNMB4-202ENST00000531884 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
KCNMB4-202ENST00000531884 MRC2Q9UBG0 1479 aa13.78□□□□□ -0.2
KCNMB4-202ENST00000531884 GJA5P36382 358 aa13.77□□□□□ -0.21
KCNMB4-202ENST00000531884 PPP4CP60510 307 aa13.77□□□□□ -0.21
KCNMB4-202ENST00000531884 GUCA2AQ02747 115 aa13.77□□□□□ -0.21
KCNMB4-202ENST00000531884 TUSC1Q2TAM9 212 aa13.77□□□□□ -0.21
KCNMB4-202ENST00000531884 FBXO31Q5XUX0 539 aaPredicted RBP13.77□□□□□ -0.21
KCNMB4-202ENST00000531884 FDX1P10109 184 aa13.76□□□□□ -0.21
KCNMB4-202ENST00000531884 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
KCNMB4-202ENST00000531884 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
KCNMB4-202ENST00000531884 QPCTQ16769 361 aa13.74□□□□□ -0.21
KCNMB4-202ENST00000531884 GRIPAP1Q4V328 841 aa13.74□□□□□ -0.21
KCNMB4-202ENST00000531884 ACTN4O43707 911 aaKnown RBP13.73□□□□□ -0.21
KCNMB4-202ENST00000531884 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
KCNMB4-202ENST00000531884 PCDHGC3Q9UN70 934 aa13.73□□□□□ -0.21
KCNMB4-202ENST00000531884 RFC5P40937 340 aa13.72□□□□□ -0.21
KCNMB4-202ENST00000531884 LILRB3O75022 631 aa13.71□□□□□ -0.21
KCNMB4-202ENST00000531884 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
KCNMB4-202ENST00000531884 CABLES1Q8TDN4 633 aa13.71□□□□□ -0.21
KCNMB4-202ENST00000531884 KCTD12Q96CX2 325 aaKnown RBP13.71□□□□□ -0.21
KCNMB4-202ENST00000531884 APLP1P51693 650 aa13.7□□□□□ -0.22
KCNMB4-202ENST00000531884 PUS10Q3MIT2 529 aaKnown RBP13.7□□□□□ -0.22
KCNMB4-202ENST00000531884 THSD4Q6ZMP0 1018 aa13.7□□□□□ -0.22
KCNMB4-202ENST00000531884 PRR14Q9BWN1 585 aa13.7□□□□□ -0.22
KCNMB4-202ENST00000531884 WBP1LQ9NX94 342 aa13.7□□□□□ -0.22
KCNMB4-202ENST00000531884 NUTM2BA6NNL0 878 aaPredicted RBP13.69□□□□□ -0.22
KCNMB4-202ENST00000531884 NUTM2EB1AL46 878 aaPredicted RBP13.69□□□□□ -0.22
KCNMB4-202ENST00000531884 FLIIQ13045 1269 aa13.69□□□□□ -0.22
KCNMB4-202ENST00000531884 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
KCNMB4-202ENST00000531884 NUTM2AQ8IVF1 878 aaPredicted RBP13.69□□□□□ -0.22
KCNMB4-202ENST00000531884 HRCP23327 699 aa13.68□□□□□ -0.22
KCNMB4-202ENST00000531884 RTL5Q5HYW3 569 aaPredicted RBP13.68□□□□□ -0.22
KCNMB4-202ENST00000531884 PRPF38BQ5VTL8 546 aaKnown RBP13.68□□□□□ -0.22
KCNMB4-202ENST00000531884 ZBTB3Q9H5J0 574 aa13.68□□□□□ -0.22
KCNMB4-202ENST00000531884 WDR62O43379 1518 aa13.68□□□□□ -0.22
KCNMB4-202ENST00000531884 MORN1Q5T089 497 aa13.67□□□□□ -0.22
KCNMB4-202ENST00000531884 PRDM2Q13029 1718 aa13.65□□□□□ -0.22
KCNMB4-202ENST00000531884 MTMR2Q13614 643 aa13.64□□□□□ -0.23
KCNMB4-202ENST00000531884 SLC27A5Q9Y2P5 690 aa13.64□□□□□ -0.23
KCNMB4-202ENST00000531884 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
KCNMB4-202ENST00000531884 C6orf229H3BNL8 230 aa13.63□□□□□ -0.23
KCNMB4-202ENST00000531884 TMEM259Q4ZIN3 620 aa13.63□□□□□ -0.23
KCNMB4-202ENST00000531884 SYMPKQ92797 1274 aaKnown RBP13.63□□□□□ -0.23
KCNMB4-202ENST00000531884 PCDHB3Q9Y5E6 796 aa13.63□□□□□ -0.23
KCNMB4-202ENST00000531884 MCM6Q14566 821 aa13.62□□□□□ -0.23
KCNMB4-202ENST00000531884 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
KCNMB4-202ENST00000531884 AP1G2O75843 785 aa13.6□□□□□ -0.23
KCNMB4-202ENST00000531884 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
KCNMB4-202ENST00000531884 PTPN5P54829 565 aa13.59□□□□□ -0.23
KCNMB4-202ENST00000531884 SNRKQ9NRH2 765 aa13.59□□□□□ -0.23
KCNMB4-202ENST00000531884 BLOC1S3Q6QNY0 202 aa13.58□□□□□ -0.24
KCNMB4-202ENST00000531884 MYT1LQ9UL68 1186 aa13.58□□□□□ -0.24
KCNMB4-202ENST00000531884 TOPBP1Q92547 1522 aa13.58□□□□□ -0.24
KCNMB4-202ENST00000531884 SPDYE5A6NIY4 337 aa13.57□□□□□ -0.24
KCNMB4-202ENST00000531884 Q3C1V9 767 aa13.57□□□□□ -0.24
KCNMB4-202ENST00000531884 SCUBE3Q8IX30 993 aa13.57□□□□□ -0.24
KCNMB4-202ENST00000531884 CFAP99D6REC4 459 aa13.56□□□□□ -0.24
KCNMB4-202ENST00000531884 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
KCNMB4-202ENST00000531884 ZMYND15Q9H091 742 aa13.56□□□□□ -0.24
KCNMB4-202ENST00000531884 DNMBPQ6XZF7 1577 aa13.55□□□□□ -0.24
KCNMB4-202ENST00000531884 NR1I2O75469 434 aa13.55□□□□□ -0.24
KCNMB4-202ENST00000531884 TSC1Q92574 1164 aa13.55□□□□□ -0.24
KCNMB4-202ENST00000531884 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
KCNMB4-202ENST00000531884 COPS2P61201 443 aa13.54□□□□□ -0.24
KCNMB4-202ENST00000531884 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
KCNMB4-202ENST00000531884 RETREG3Q86VR2 466 aa13.54□□□□□ -0.24
KCNMB4-202ENST00000531884 PRR7Q8TB68 274 aa13.54□□□□□ -0.24
KCNMB4-202ENST00000531884 BRICD5Q6PL45 260 aa13.53□□□□□ -0.24
KCNMB4-202ENST00000531884 IFT140Q96RY7 1462 aa13.53□□□□□ -0.24
KCNMB4-202ENST00000531884 USP17L8P0C7I0 530 aa13.52□□□□□ -0.25
KCNMB4-202ENST00000531884 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
KCNMB4-202ENST00000531884 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
KCNMB4-202ENST00000531884 HELBQ8NG08 1087 aaPredicted RBP13.51□□□□□ -0.25
KCNMB4-202ENST00000531884 THAP11Q96EK4 314 aa13.51□□□□□ -0.25
KCNMB4-202ENST00000531884 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
KCNMB4-202ENST00000531884 FMNL1O95466 1100 aaPredicted RBP13.5□□□□□ -0.25
KCNMB4-202ENST00000531884 MTMR14Q8NCE2 650 aa13.5□□□□□ -0.25
KCNMB4-202ENST00000531884 CLUAP1Q96AJ1 413 aa13.5□□□□□ -0.25
KCNMB4-202ENST00000531884 USB1Q9BQ65 265 aaKnown RBP13.49□□□□□ -0.25
KCNMB4-202ENST00000531884 SPNS2Q8IVW8 549 aa13.47□□□□□ -0.25
KCNMB4-202ENST00000531884 POM121Q96HA1 1249 aa13.47□□□□□ -0.25
KCNMB4-202ENST00000531884 MTRQ99707 1265 aa13.47□□□□□ -0.25
KCNMB4-202ENST00000531884 SOGA1O94964 1423 aa13.47□□□□□ -0.25
KCNMB4-202ENST00000531884 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
KCNMB4-202ENST00000531884 CUX1P39880 1505 aa13.45□□□□□ -0.26
KCNMB4-202ENST00000531884 LRRN4Q8WUT4 740 aa13.45□□□□□ -0.26
KCNMB4-202ENST00000531884 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
KCNMB4-202ENST00000531884 RNF166Q96A37 237 aaPredicted RBP13.44□□□□□ -0.26
KCNMB4-202ENST00000531884 SPSB2Q99619 263 aa13.44□□□□□ -0.26
KCNMB4-202ENST00000531884 HMX1Q9NP08 348 aaPredicted RBP13.44□□□□□ -0.26
KCNMB4-202ENST00000531884 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
KCNMB4-202ENST00000531884 PER1O15534 1290 aaPredicted RBP13.43□□□□□ -0.26
KCNMB4-202ENST00000531884 RAD21O60216 631 aa13.43□□□□□ -0.26
KCNMB4-202ENST00000531884 ZPR1O75312 459 aa13.43□□□□□ -0.26
KCNMB4-202ENST00000531884 DESI1Q6ICB0 168 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms