RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
CHEK1-211ENST00000531062 PCMTD1Q96MG8 357 aaPredicted RBP11.47□□□□□ -0.57
CHEK1-211ENST00000531062 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
CHEK1-211ENST00000531062 CLK2P49760 499 aaKnown RBP11.46□□□□□ -0.57
CHEK1-211ENST00000531062 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
CHEK1-211ENST00000531062 CSPP1Q1MSJ5 1256 aa11.45□□□□□ -0.58
CHEK1-211ENST00000531062 PRPF38BQ5VTL8 546 aaKnown RBP11.45□□□□□ -0.58
CHEK1-211ENST00000531062 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHEK1-211ENST00000531062 PLA2G2EQ9NZK7 142 aa11.45□□□□□ -0.58
CHEK1-211ENST00000531062 RNF19BQ6ZMZ0 732 aa11.44□□□□□ -0.58
CHEK1-211ENST00000531062 NKX2-3Q8TAU0 364 aa11.44□□□□□ -0.58
CHEK1-211ENST00000531062 ADH1BP00325 375 aa11.43□□□□□ -0.58
CHEK1-211ENST00000531062 PROCA1Q8NCQ7 364 aaPredicted RBP11.43□□□□□ -0.58
CHEK1-211ENST00000531062 SPSB2Q99619 263 aa11.43□□□□□ -0.58
CHEK1-211ENST00000531062 LILRB3O75022 631 aa11.42□□□□□ -0.58
CHEK1-211ENST00000531062 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
CHEK1-211ENST00000531062 TLL1O43897 1013 aa11.41□□□□□ -0.58
CHEK1-211ENST00000531062 FAM160A2Q8N612 972 aaPredicted RBP11.41□□□□□ -0.58
CHEK1-211ENST00000531062 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
CHEK1-211ENST00000531062 USB1Q9BQ65 265 aaKnown RBP11.41□□□□□ -0.58
CHEK1-211ENST00000531062 NUTM2BA6NNL0 878 aaPredicted RBP11.4□□□□□ -0.58
CHEK1-211ENST00000531062 NUTM2EB1AL46 878 aaPredicted RBP11.4□□□□□ -0.58
CHEK1-211ENST00000531062 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
CHEK1-211ENST00000531062 HRCP23327 699 aa11.4□□□□□ -0.58
CHEK1-211ENST00000531062 MSS51Q4VC12 460 aa11.4□□□□□ -0.58
CHEK1-211ENST00000531062 NUTM2DQ5VT03 806 aaPredicted RBP11.4□□□□□ -0.58
CHEK1-211ENST00000531062 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
CHEK1-211ENST00000531062 NUTM2AQ8IVF1 878 aaPredicted RBP11.4□□□□□ -0.58
CHEK1-211ENST00000531062 MTMR2Q13614 643 aa11.39□□□□□ -0.59
CHEK1-211ENST00000531062 QPCTQ16769 361 aa11.39□□□□□ -0.59
CHEK1-211ENST00000531062 PPP2R2DQ66LE6 453 aa11.39□□□□□ -0.59
CHEK1-211ENST00000531062 ZBTB3Q9H5J0 574 aa11.39□□□□□ -0.59
CHEK1-211ENST00000531062 FBXO31Q5XUX0 539 aaPredicted RBP11.37□□□□□ -0.59
CHEK1-211ENST00000531062 CABLES1Q8TDN4 633 aa11.37□□□□□ -0.59
CHEK1-211ENST00000531062 MMP16P51512 607 aa11.35□□□□□ -0.59
CHEK1-211ENST00000531062 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
CHEK1-211ENST00000531062 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
CHEK1-211ENST00000531062 DESI1Q6ICB0 168 aa11.34□□□□□ -0.59
CHEK1-211ENST00000531062 A0A0G2JS52 829 aa11.33□□□□□ -0.6
CHEK1-211ENST00000531062 DXOO77932 396 aaKnown RBP11.33□□□□□ -0.6
CHEK1-211ENST00000531062 TSC1Q92574 1164 aa11.33□□□□□ -0.6
CHEK1-211ENST00000531062 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
CHEK1-211ENST00000531062 S1PR4O95977 384 aa11.32□□□□□ -0.6
CHEK1-211ENST00000531062 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
CHEK1-211ENST00000531062 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
CHEK1-211ENST00000531062 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
CHEK1-211ENST00000531062 JUNDP17535 347 aa11.3□□□□□ -0.6
CHEK1-211ENST00000531062 PRDM9Q9NQV7 894 aa11.3□□□□□ -0.6
CHEK1-211ENST00000531062 RNF223E7ERA6 249 aa11.29□□□□□ -0.6
CHEK1-211ENST00000531062 GGCXP38435 758 aa11.29□□□□□ -0.6
CHEK1-211ENST00000531062 RFC5P40937 340 aa11.27□□□□□ -0.61
CHEK1-211ENST00000531062 ANKLE1Q8NAG6 615 aa11.27□□□□□ -0.61
CHEK1-211ENST00000531062 LYPD8Q6UX82 237 aa11.26□□□□□ -0.61
CHEK1-211ENST00000531062 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
CHEK1-211ENST00000531062 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
CHEK1-211ENST00000531062 PTPRNQ16849 979 aa11.24□□□□□ -0.61
CHEK1-211ENST00000531062 TMEM259Q4ZIN3 620 aa11.24□□□□□ -0.61
CHEK1-211ENST00000531062 AP1G2O75843 785 aa11.23□□□□□ -0.61
CHEK1-211ENST00000531062 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
CHEK1-211ENST00000531062 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.61
CHEK1-211ENST00000531062 EVA1BQ9NVM1 165 aa11.21□□□□□ -0.61
CHEK1-211ENST00000531062 FCF1Q9Y324 198 aaKnown RBP11.21□□□□□ -0.61
CHEK1-211ENST00000531062 RGS20O76081 388 aa11.2□□□□□ -0.62
CHEK1-211ENST00000531062 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
CHEK1-211ENST00000531062 NUDT12Q9BQG2 462 aa11.2□□□□□ -0.62
CHEK1-211ENST00000531062 CCNYL3P0C7X3 344 aa11.19□□□□□ -0.62
CHEK1-211ENST00000531062 PLA2G2CQ5R387 149 aa11.19□□□□□ -0.62
CHEK1-211ENST00000531062 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
CHEK1-211ENST00000531062 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
CHEK1-211ENST00000531062 CCDC24Q8N4L8 307 aa11.17□□□□□ -0.62
CHEK1-211ENST00000531062 GTF3C3Q9Y5Q9 886 aa11.17□□□□□ -0.62
CHEK1-211ENST00000531062 SOCS7O14512 581 aa11.16□□□□□ -0.62
CHEK1-211ENST00000531062 KCNH2Q12809 1159 aa11.16□□□□□ -0.62
CHEK1-211ENST00000531062 USP17L8P0C7I0 530 aa11.15□□□□□ -0.62
CHEK1-211ENST00000531062 PTCRAQ6ISU1 281 aaPredicted RBP11.15□□□□□ -0.62
CHEK1-211ENST00000531062 LIAT1Q6ZQX7 453 aa11.15□□□□□ -0.62
CHEK1-211ENST00000531062 CTHP32929 405 aa11.14□□□□□ -0.63
CHEK1-211ENST00000531062 RPIAP49247 311 aa11.14□□□□□ -0.63
CHEK1-211ENST00000531062 LRRN4Q8WUT4 740 aa11.14□□□□□ -0.63
CHEK1-211ENST00000531062 V9GY48 417 aaPredicted RBP11.14□□□□□ -0.63
CHEK1-211ENST00000531062 SLC19A1P41440 591 aa11.11□□□□□ -0.63
CHEK1-211ENST00000531062 ZBTB24O43167 697 aaPredicted RBP11.1□□□□□ -0.63
CHEK1-211ENST00000531062 PRKD2Q9BZL6 878 aa11.1□□□□□ -0.63
CHEK1-211ENST00000531062 HMX1Q9NP08 348 aaPredicted RBP11.1□□□□□ -0.63
CHEK1-211ENST00000531062 SNRKQ9NRH2 765 aa11.1□□□□□ -0.63
CHEK1-211ENST00000531062 MAP10Q9P2G4 905 aa11.1□□□□□ -0.63
CHEK1-211ENST00000531062 APBB1O00213 710 aa11.09□□□□□ -0.63
CHEK1-211ENST00000531062 FLIIQ13045 1269 aa11.09□□□□□ -0.63
CHEK1-211ENST00000531062 MTMR14Q8NCE2 650 aa11.09□□□□□ -0.63
CHEK1-211ENST00000531062 GJD4Q96KN9 370 aaPredicted RBP11.09□□□□□ -0.63
CHEK1-211ENST00000531062 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
CHEK1-211ENST00000531062 TRIM34Q9BYJ4 488 aa11.08□□□□□ -0.64
CHEK1-211ENST00000531062 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
CHEK1-211ENST00000531062 CD2BP2O95400 341 aaKnown RBP11.07□□□□□ -0.64
CHEK1-211ENST00000531062 TRIM32Q13049 653 aa11.07□□□□□ -0.64
CHEK1-211ENST00000531062 PRM3Q9NNZ6 103 aa11.07□□□□□ -0.64
CHEK1-211ENST00000531062 NR6A1Q15406 480 aa11.05□□□□□ -0.64
CHEK1-211ENST00000531062 PNMA1Q8ND90 353 aa11.05□□□□□ -0.64
CHEK1-211ENST00000531062 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
CHEK1-211ENST00000531062 MCM6Q14566 821 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms