RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
CHEK1-211ENST00000531062 CHIC1Q5VXU3 224 aa27.74■■■□□ 2.03
CHEK1-211ENST00000531062 PHF23Q9BUL5 403 aaPredicted RBP24.42■■□□□ 1.5
CHEK1-211ENST00000531062 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
CHEK1-211ENST00000531062 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
CHEK1-211ENST00000531062 FOXD1Q16676 465 aa22.31■■□□□ 1.16
CHEK1-211ENST00000531062 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
CHEK1-211ENST00000531062 ADRA2BP18089 450 aa21.45■■□□□ 1.02
CHEK1-211ENST00000531062 POTEDQ86YR6 584 aa21.4■■□□□ 1.02
CHEK1-211ENST00000531062 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
CHEK1-211ENST00000531062 MSH5O43196 834 aa20.54■□□□□ 0.88
CHEK1-211ENST00000531062 PPP4R3CPQ6ZMV5 832 aa19.84■□□□□ 0.77
CHEK1-211ENST00000531062 SCAF1Q9H7N4 1312 aaKnown RBP19.63■□□□□ 0.73
CHEK1-211ENST00000531062 MAPK8IP2Q13387 824 aaPredicted RBP19.46■□□□□ 0.71
CHEK1-211ENST00000531062 KCNA4P22459 653 aa19.42■□□□□ 0.7
CHEK1-211ENST00000531062 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
CHEK1-211ENST00000531062 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
CHEK1-211ENST00000531062 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
CHEK1-211ENST00000531062 NPM3O75607 178 aaKnown RBP19.05■□□□□ 0.64
CHEK1-211ENST00000531062 RNF216Q9NWF9 866 aaPredicted RBP18.92■□□□□ 0.62
CHEK1-211ENST00000531062 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
CHEK1-211ENST00000531062 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
CHEK1-211ENST00000531062 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
CHEK1-211ENST00000531062 DCAF8L1A6NGE4 600 aa18.21■□□□□ 0.51
CHEK1-211ENST00000531062 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
CHEK1-211ENST00000531062 SLC4A2P04920 1241 aa18.02■□□□□ 0.48
CHEK1-211ENST00000531062 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
CHEK1-211ENST00000531062 ZBTB22O15209 634 aa17.9■□□□□ 0.46
CHEK1-211ENST00000531062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHEK1-211ENST00000531062 FOXD4L1Q9NU39 408 aa17.86■□□□□ 0.45
CHEK1-211ENST00000531062 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
CHEK1-211ENST00000531062 RNF39Q9H2S5 420 aa17.64■□□□□ 0.41
CHEK1-211ENST00000531062 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
CHEK1-211ENST00000531062 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
CHEK1-211ENST00000531062 C1QBPQ07021 282 aaKnown RBP17.43■□□□□ 0.38
CHEK1-211ENST00000531062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
CHEK1-211ENST00000531062 HNRNPUL2Q1KMD3 747 aaKnown RBP17.42■□□□□ 0.38
CHEK1-211ENST00000531062 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
CHEK1-211ENST00000531062 ATXN8OSP0DMR3 200 aa17.29■□□□□ 0.36
CHEK1-211ENST00000531062 APLP2Q06481 763 aa17.2■□□□□ 0.34
CHEK1-211ENST00000531062 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
CHEK1-211ENST00000531062 SPINK5Q9NQ38 1064 aaPredicted RBP17.11■□□□□ 0.33
CHEK1-211ENST00000531062 CAPN15O75808 1086 aa16.98■□□□□ 0.31
CHEK1-211ENST00000531062 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.31
CHEK1-211ENST00000531062 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
CHEK1-211ENST00000531062 DSG3P32926 999 aa16.78■□□□□ 0.28
CHEK1-211ENST00000531062 POLA2Q14181 598 aa16.7■□□□□ 0.26
CHEK1-211ENST00000531062 ABCB7O75027 752 aa16.65■□□□□ 0.26
CHEK1-211ENST00000531062 POTEHQ6S545 545 aa16.63■□□□□ 0.25
CHEK1-211ENST00000531062 ZBTB12Q9Y330 459 aaPredicted RBP16.44■□□□□ 0.22
CHEK1-211ENST00000531062 MKRN4PQ13434 485 aaPredicted RBP16.42■□□□□ 0.22
CHEK1-211ENST00000531062 FBLN2P98095 1184 aa16.35■□□□□ 0.21
CHEK1-211ENST00000531062 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
CHEK1-211ENST00000531062 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
CHEK1-211ENST00000531062 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
CHEK1-211ENST00000531062 FKBP8Q14318 412 aa16.02■□□□□ 0.16
CHEK1-211ENST00000531062 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
CHEK1-211ENST00000531062 SPDYE4A6NLX3 237 aa16.01■□□□□ 0.15
CHEK1-211ENST00000531062 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
CHEK1-211ENST00000531062 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
CHEK1-211ENST00000531062 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
CHEK1-211ENST00000531062 PROM2Q8N271 834 aa15.88■□□□□ 0.13
CHEK1-211ENST00000531062 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
CHEK1-211ENST00000531062 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHEK1-211ENST00000531062 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
CHEK1-211ENST00000531062 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
CHEK1-211ENST00000531062 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
CHEK1-211ENST00000531062 FBXO3Q9UK99 471 aa15.49■□□□□ 0.07
CHEK1-211ENST00000531062 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
CHEK1-211ENST00000531062 CLEC11AQ9Y240 323 aa15.36■□□□□ 0.05
CHEK1-211ENST00000531062 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
CHEK1-211ENST00000531062 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
CHEK1-211ENST00000531062 VASPP50552 380 aaPredicted RBP15.28■□□□□ 0.04
CHEK1-211ENST00000531062 SP7Q8TDD2 431 aaPredicted RBP15.2■□□□□ 0.02
CHEK1-211ENST00000531062 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHEK1-211ENST00000531062 MIER1Q8N108 512 aa15.15■□□□□ 0.02
CHEK1-211ENST00000531062 CREBZFQ9NS37 354 aa15.15■□□□□ 0.02
CHEK1-211ENST00000531062 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
CHEK1-211ENST00000531062 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
CHEK1-211ENST00000531062 PLCD3Q8N3E9 789 aa15.1■□□□□ 0.01
CHEK1-211ENST00000531062 MNX1P50219 401 aaPredicted RBP15.05■□□□□ -0
CHEK1-211ENST00000531062 PLEKHG5O94827 1062 aa15.03■□□□□ -0
CHEK1-211ENST00000531062 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
CHEK1-211ENST00000531062 CHADLQ6NUI6 762 aa15.01□□□□□ -0.01
CHEK1-211ENST00000531062 ZBTB47Q9UFB7 747 aaPredicted RBP14.98□□□□□ -0.01
CHEK1-211ENST00000531062 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
CHEK1-211ENST00000531062 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
CHEK1-211ENST00000531062 SPOCK2Q92563 424 aa14.88□□□□□ -0.03
CHEK1-211ENST00000531062 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
CHEK1-211ENST00000531062 NUBP1P53384 320 aa14.84□□□□□ -0.03
CHEK1-211ENST00000531062 HAX1O00165 279 aa14.77□□□□□ -0.05
CHEK1-211ENST00000531062 AMER1Q5JTC6 1135 aaPredicted RBP14.75□□□□□ -0.05
CHEK1-211ENST00000531062 RASEFQ8IZ41 740 aa14.73□□□□□ -0.05
CHEK1-211ENST00000531062 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
CHEK1-211ENST00000531062 RTN4Q9NQC3 1192 aaKnown RBP14.66□□□□□ -0.06
CHEK1-211ENST00000531062 GSE1Q14687 1217 aa14.64□□□□□ -0.07
CHEK1-211ENST00000531062 FAM212AQ96EL1 285 aa14.64□□□□□ -0.07
CHEK1-211ENST00000531062 PKD2Q13563 968 aa14.62□□□□□ -0.07
CHEK1-211ENST00000531062 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
CHEK1-211ENST00000531062 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms