RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 FOXD4L3Q6VB84 417 aaPredicted RBP10.31□□□□□ -0.76
CTNND1-227ENST00000530748 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 RAPGEF4Q8WZA2 1011 aa10.31□□□□□ -0.76
CTNND1-227ENST00000530748 HMOX1P09601 288 aa10.3□□□□□ -0.76
CTNND1-227ENST00000530748 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
CTNND1-227ENST00000530748 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-227ENST00000530748 SUPT6HQ7KZ85 1726 aaKnown RBP10.3□□□□□ -0.76
CTNND1-227ENST00000530748 AMER1Q5JTC6 1135 aaPredicted RBP10.3□□□□□ -0.76
CTNND1-227ENST00000530748 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-227ENST00000530748 IFT140Q96RY7 1462 aa10.29□□□□□ -0.76
CTNND1-227ENST00000530748 TNNT3P45378 269 aaPredicted RBP10.29□□□□□ -0.76
CTNND1-227ENST00000530748 CHMP5Q9NZZ3 219 aa10.29□□□□□ -0.76
CTNND1-227ENST00000530748 SMC3Q9UQE7 1217 aa10.29□□□□□ -0.76
CTNND1-227ENST00000530748 SYNJ1O43426 1573 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 DHX16O60231 1041 aaKnown RBP10.28□□□□□ -0.76
CTNND1-227ENST00000530748 CDC45O75419 566 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
CTNND1-227ENST00000530748 BICD2Q8TD16 824 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 FANCIQ9NVI1 1328 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 GPRASP1Q5JY77 1395 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 PRG4Q92954 1404 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-227ENST00000530748 UBTFL1P0CB47 393 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-227ENST00000530748 GPS2Q13227 327 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 GGNBP2Q9H3C7 697 aa10.28□□□□□ -0.76
CTNND1-227ENST00000530748 NUCB2P80303 420 aa10.27□□□□□ -0.76
CTNND1-227ENST00000530748 CNTROBQ8N137 903 aa10.27□□□□□ -0.76
CTNND1-227ENST00000530748 SETQ01105 290 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-227ENST00000530748 CCDC30Q5VVM6 783 aa10.27□□□□□ -0.77
CTNND1-227ENST00000530748 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
CTNND1-227ENST00000530748 GAS2L2Q8NHY3 880 aa10.27□□□□□ -0.77
CTNND1-227ENST00000530748 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
CTNND1-227ENST00000530748 HFM1A2PYH4 1435 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 SASS6Q6UVJ0 657 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 C9orf84Q5VXU9 1444 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 ARAP1Q96P48 1450 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 PSMA5P28066 241 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 SAFBQ15424 915 aaKnown RBP eCLIP10.26□□□□□ -0.77
CTNND1-227ENST00000530748 CCAR2Q8N163 923 aaKnown RBP10.26□□□□□ -0.77
CTNND1-227ENST00000530748 BRMS1Q9HCU9 246 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
CTNND1-227ENST00000530748 WWC1Q8IX03 1113 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 C22orf23Q9BZE7 217 aa10.26□□□□□ -0.77
CTNND1-227ENST00000530748 KIF6Q6ZMV9 814 aa10.25□□□□□ -0.77
CTNND1-227ENST00000530748 NEUROD6Q96NK8 337 aa10.25□□□□□ -0.77
CTNND1-227ENST00000530748 VPS37CA5D8V6 355 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-227ENST00000530748 IPO7O95373 1038 aaKnown RBP10.25□□□□□ -0.77
CTNND1-227ENST00000530748 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
CTNND1-227ENST00000530748 CFTRP13569 1480 aa10.25□□□□□ -0.77
CTNND1-227ENST00000530748 PANK1Q8TE04 598 aa10.25□□□□□ -0.77
CTNND1-227ENST00000530748 KIAA1107Q9UPP5 1409 aa10.25□□□□□ -0.77
CTNND1-227ENST00000530748 WASHC4Q2M389 1173 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 PLEKHO1Q53GL0 409 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-227ENST00000530748 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 RALYLQ86SE5 291 aaKnown RBP10.24□□□□□ -0.77
CTNND1-227ENST00000530748 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-227ENST00000530748 FOSBP53539 338 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 TMEM132EQ6IEE7 984 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 LNPKQ9C0E8 428 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 PPP2R1AP30153 589 aa10.24□□□□□ -0.77
CTNND1-227ENST00000530748 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
CTNND1-227ENST00000530748 CCDC27Q2M243 656 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 CNKSR2Q8WXI2 1034 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 TIAM1Q13009 1591 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 HIP1O00291 1037 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 CCDC73Q6ZRK6 1079 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
CTNND1-227ENST00000530748 XBP1P17861 261 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 NLRP6P59044 892 aa10.23□□□□□ -0.77
CTNND1-227ENST00000530748 FYB1O15117 783 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 GNAI3P08754 354 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 ERC1Q8IUD2 1116 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 SNAPC4Q5SXM2 1469 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 LETM1O95202 739 aaPredicted RBP10.22□□□□□ -0.77
CTNND1-227ENST00000530748 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 MTHFSP49914 203 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 FSD1Q9BTV5 496 aa10.22□□□□□ -0.77
CTNND1-227ENST00000530748 NAT10Q9H0A0 1025 aaKnown RBP10.22□□□□□ -0.77
CTNND1-227ENST00000530748 ERBINQ96RT1 1412 aa10.21□□□□□ -0.77
CTNND1-227ENST00000530748 HMGXB3Q12766 1538 aa10.21□□□□□ -0.77
CTNND1-227ENST00000530748 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.77
CTNND1-227ENST00000530748 ESCO1Q5FWF5 840 aa10.21□□□□□ -0.77
CTNND1-227ENST00000530748 TBC1D2BQ9UPU7 963 aa10.21□□□□□ -0.77
CTNND1-227ENST00000530748 HSP90AA2PQ14568 343 aaPredicted RBP10.21□□□□□ -0.77
CTNND1-227ENST00000530748 KLHL34Q8N239 644 aa10.21□□□□□ -0.77
CTNND1-227ENST00000530748 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.78
CTNND1-227ENST00000530748 DAPK1P53355 1430 aa10.21□□□□□ -0.78
CTNND1-227ENST00000530748 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
CTNND1-227ENST00000530748 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
CTNND1-227ENST00000530748 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
CTNND1-227ENST00000530748 PRAM1Q96QH2 718 aa10.2□□□□□ -0.78
CTNND1-227ENST00000530748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-227ENST00000530748 GCC1Q96CN9 775 aa10.2□□□□□ -0.78
CTNND1-227ENST00000530748 TOPBP1Q92547 1522 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 SART3Q15020 963 aaKnown RBP10.19□□□□□ -0.78
CTNND1-227ENST00000530748 CFAP70Q5T0N1 1121 aa10.19□□□□□ -0.78
CTNND1-227ENST00000530748 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms