RNA–Protein interactions for RNA: ENST00000530369.1

USP47-210, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-210ENST00000530369 ZBTB3Q9H5J0 574 aa7.48□□□□□ -1.21
USP47-210ENST00000530369 ABCC9O60706 1549 aa7.47□□□□□ -1.21
USP47-210ENST00000530369 MTMR2Q13614 643 aa7.47□□□□□ -1.21
USP47-210ENST00000530369 SKIV2LQ15477 1246 aaKnown RBP7.47□□□□□ -1.21
USP47-210ENST00000530369 PRPF38BQ5VTL8 546 aaKnown RBP7.47□□□□□ -1.21
USP47-210ENST00000530369 RETREG3Q86VR2 466 aa7.47□□□□□ -1.21
USP47-210ENST00000530369 ZNF516Q92618 1163 aa7.47□□□□□ -1.21
USP47-210ENST00000530369 PLEKHG3A1L390 1219 aa7.46□□□□□ -1.22
USP47-210ENST00000530369 NDUFV2P19404 249 aa7.46□□□□□ -1.22
USP47-210ENST00000530369 USB1Q9BQ65 265 aaKnown RBP7.46□□□□□ -1.22
USP47-210ENST00000530369 SLC6A16Q9GZN6 736 aa7.46□□□□□ -1.22
USP47-210ENST00000530369 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
USP47-210ENST00000530369 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
USP47-210ENST00000530369 TLL1O43897 1013 aa7.45□□□□□ -1.22
USP47-210ENST00000530369 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
USP47-210ENST00000530369 MSS51Q4VC12 460 aa7.45□□□□□ -1.22
USP47-210ENST00000530369 NUTM2DQ5VT03 806 aaPredicted RBP7.45□□□□□ -1.22
USP47-210ENST00000530369 BRICD5Q6PL45 260 aa7.45□□□□□ -1.22
USP47-210ENST00000530369 NUTM2AQ8IVF1 878 aaPredicted RBP7.45□□□□□ -1.22
USP47-210ENST00000530369 POLR3EQ9NVU0 708 aa7.45□□□□□ -1.22
USP47-210ENST00000530369 CSPP1Q1MSJ5 1256 aa7.44□□□□□ -1.22
USP47-210ENST00000530369 RNF19BQ6ZMZ0 732 aa7.44□□□□□ -1.22
USP47-210ENST00000530369 HLA-CQ95604 372 aa7.44□□□□□ -1.22
USP47-210ENST00000530369 THAP11Q96EK4 314 aa7.44□□□□□ -1.22
USP47-210ENST00000530369 A0A0G2JS52 829 aa7.43□□□□□ -1.22
USP47-210ENST00000530369 HELBQ8NG08 1087 aaPredicted RBP7.43□□□□□ -1.22
USP47-210ENST00000530369 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
USP47-210ENST00000530369 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.42□□□□□ -1.22
USP47-210ENST00000530369 LIMD1Q9UGP4 676 aa7.42□□□□□ -1.22
USP47-210ENST00000530369 PCDHGC3Q9UN70 934 aa7.42□□□□□ -1.22
USP47-210ENST00000530369 NKX2-3Q8TAU0 364 aa7.41□□□□□ -1.22
USP47-210ENST00000530369 S1PR4O95977 384 aa7.4□□□□□ -1.22
USP47-210ENST00000530369 JUNDP17535 347 aa7.4□□□□□ -1.22
USP47-210ENST00000530369 HRCP23327 699 aa7.4□□□□□ -1.22
USP47-210ENST00000530369 DESI1Q6ICB0 168 aa7.4□□□□□ -1.22
USP47-210ENST00000530369 PPP1R18Q6NYC8 613 aa7.4□□□□□ -1.22
USP47-210ENST00000530369 PRR7Q8TB68 274 aa7.4□□□□□ -1.22
USP47-210ENST00000530369 TMEM132AQ24JP5 1023 aa7.39□□□□□ -1.23
USP47-210ENST00000530369 ANKLE1Q8NAG6 615 aa7.39□□□□□ -1.23
USP47-210ENST00000530369 TSC1Q92574 1164 aa7.39□□□□□ -1.23
USP47-210ENST00000530369 PCDHB15Q9Y5E8 787 aa7.39□□□□□ -1.23
USP47-210ENST00000530369 LILRB3O75022 631 aa7.38□□□□□ -1.23
USP47-210ENST00000530369 DXOO77932 396 aaKnown RBP7.38□□□□□ -1.23
USP47-210ENST00000530369 MMP16P51512 607 aa7.38□□□□□ -1.23
USP47-210ENST00000530369 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
USP47-210ENST00000530369 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP47-210ENST00000530369 QPCTQ16769 361 aa7.37□□□□□ -1.23
USP47-210ENST00000530369 PTPRNQ16849 979 aa7.37□□□□□ -1.23
USP47-210ENST00000530369 FAM160A2Q8N612 972 aaPredicted RBP7.37□□□□□ -1.23
USP47-210ENST00000530369 CABLES1Q8TDN4 633 aa7.37□□□□□ -1.23
USP47-210ENST00000530369 RNF223E7ERA6 249 aa7.36□□□□□ -1.23
USP47-210ENST00000530369 ZBTB24O43167 697 aaPredicted RBP7.36□□□□□ -1.23
USP47-210ENST00000530369 PPP2R2DQ66LE6 453 aa7.36□□□□□ -1.23
USP47-210ENST00000530369 PROCA1Q8NCQ7 364 aaPredicted RBP7.36□□□□□ -1.23
USP47-210ENST00000530369 TMEM259Q4ZIN3 620 aa7.35□□□□□ -1.23
USP47-210ENST00000530369 NUDT12Q9BQG2 462 aa7.35□□□□□ -1.23
USP47-210ENST00000530369 PRDM9Q9NQV7 894 aa7.35□□□□□ -1.23
USP47-210ENST00000530369 FCF1Q9Y324 198 aaKnown RBP7.35□□□□□ -1.23
USP47-210ENST00000530369 CFAP99D6REC4 459 aa7.34□□□□□ -1.23
USP47-210ENST00000530369 APBB1O00213 710 aa7.34□□□□□ -1.23
USP47-210ENST00000530369 CCNYL3P0C7X3 344 aa7.34□□□□□ -1.23
USP47-210ENST00000530369 CCDC24Q8N4L8 307 aa7.33□□□□□ -1.24
USP47-210ENST00000530369 PNMA1Q8ND90 353 aa7.33□□□□□ -1.24
USP47-210ENST00000530369 AP1G2O75843 785 aa7.32□□□□□ -1.24
USP47-210ENST00000530369 RFC5P40937 340 aa7.32□□□□□ -1.24
USP47-210ENST00000530369 RTL5Q5HYW3 569 aaPredicted RBP7.32□□□□□ -1.24
USP47-210ENST00000530369 V9GY48 417 aaPredicted RBP7.32□□□□□ -1.24
USP47-210ENST00000530369 RPIAP49247 311 aa7.31□□□□□ -1.24
USP47-210ENST00000530369 LYPD8Q6UX82 237 aa7.31□□□□□ -1.24
USP47-210ENST00000530369 PPEF1O14829 653 aaPredicted RBP7.3□□□□□ -1.24
USP47-210ENST00000530369 CD2BP2O95400 341 aaKnown RBP7.3□□□□□ -1.24
USP47-210ENST00000530369 CTHP32929 405 aa7.3□□□□□ -1.24
USP47-210ENST00000530369 SLC19A1P41440 591 aa7.3□□□□□ -1.24
USP47-210ENST00000530369 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
USP47-210ENST00000530369 BANK1Q8NDB2 785 aa7.29□□□□□ -1.24
USP47-210ENST00000530369 ARMC2Q8NEN0 867 aa7.29□□□□□ -1.24
USP47-210ENST00000530369 USP17L8P0C7I0 530 aa7.28□□□□□ -1.24
USP47-210ENST00000530369 KCNH2Q12809 1159 aa7.28□□□□□ -1.24
USP47-210ENST00000530369 PRM3Q9NNZ6 103 aa7.28□□□□□ -1.24
USP47-210ENST00000530369 EVA1BQ9NVM1 165 aa7.28□□□□□ -1.24
USP47-210ENST00000530369 SOCS7O14512 581 aa7.26□□□□□ -1.25
USP47-210ENST00000530369 CTDSPL2Q05D32 466 aa7.26□□□□□ -1.25
USP47-210ENST00000530369 NBPF14Q5TI25 921 aa7.26□□□□□ -1.25
USP47-210ENST00000530369 UNC93B1Q9H1C4 597 aa7.26□□□□□ -1.25
USP47-210ENST00000530369 CCDC180Q9P1Z9 1646 aa7.26□□□□□ -1.25
USP47-210ENST00000530369 WNT7BP56706 349 aa7.25□□□□□ -1.25
USP47-210ENST00000530369 TRIM32Q13049 653 aa7.25□□□□□ -1.25
USP47-210ENST00000530369 ZC3H4Q9UPT8 1303 aaKnown RBP7.25□□□□□ -1.25
USP47-210ENST00000530369 PER1O15534 1290 aaPredicted RBP7.24□□□□□ -1.25
USP47-210ENST00000530369 F12P00748 615 aaPredicted RBP7.24□□□□□ -1.25
USP47-210ENST00000530369 SPRYD7Q5W111 196 aa7.24□□□□□ -1.25
USP47-210ENST00000530369 ZNF598Q86UK7 904 aaKnown RBP7.24□□□□□ -1.25
USP47-210ENST00000530369 GPKOWQ92917 476 aaPredicted RBP eCLIP7.24□□□□□ -1.25
USP47-210ENST00000530369 FLIIQ13045 1269 aa7.23□□□□□ -1.25
USP47-210ENST00000530369 PLA2G2CQ5R387 149 aa7.23□□□□□ -1.25
USP47-210ENST00000530369 ZNF697Q5TEC3 545 aa7.23□□□□□ -1.25
USP47-210ENST00000530369 LIAT1Q6ZQX7 453 aa7.23□□□□□ -1.25
USP47-210ENST00000530369 MAP10Q9P2G4 905 aa7.23□□□□□ -1.25
USP47-210ENST00000530369 LCE2BO14633 110 aa7.22□□□□□ -1.25
USP47-210ENST00000530369 LRRN4Q8WUT4 740 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms