RNA–Protein interactions for RNA: ENST00000530301.5

RDX-210, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-210ENST00000530301 PARD3Q8TEW0 1356 aa35.53■■■■□ 3.28
RDX-210ENST00000530301 MYBBP1AQ9BQG0 1328 aaKnown RBP35.53■■■■□ 3.28
RDX-210ENST00000530301 ATAD2Q6PL18 1390 aa35.52■■■■□ 3.28
RDX-210ENST00000530301 SENP3Q9H4L4 574 aaPredicted RBP35.51■■■■□ 3.27
RDX-210ENST00000530301 ANKLE2Q86XL3 938 aa35.49■■■■□ 3.27
RDX-210ENST00000530301 MRS2Q9HD23 443 aa35.48■■■■□ 3.27
RDX-210ENST00000530301 PIK3R4Q99570 1358 aa35.48■■■■□ 3.27
RDX-210ENST00000530301 BRD4O60885 1362 aaPredicted RBP35.46■■■■□ 3.27
RDX-210ENST00000530301 SAFB2Q14151 953 aaKnown RBP eCLIP35.44■■■■□ 3.26
RDX-210ENST00000530301 SRPK2P78362 688 aaKnown RBP35.43■■■■□ 3.26
RDX-210ENST00000530301 MINK1Q8N4C8 1332 aaPredicted RBP35.43■■■■□ 3.26
RDX-210ENST00000530301 AMER1Q5JTC6 1135 aaPredicted RBP35.41■■■■□ 3.26
RDX-210ENST00000530301 NLRP13Q86W25 1043 aa35.41■■■■□ 3.26
RDX-210ENST00000530301 TMC1Q8TDI8 760 aa35.41■■■■□ 3.26
RDX-210ENST00000530301 ANKRD36BQ8N2N9 1353 aa35.38■■■■□ 3.25
RDX-210ENST00000530301 WAPLQ7Z5K2 1190 aa35.37■■■■□ 3.25
RDX-210ENST00000530301 CDK19Q9BWU1 502 aa35.37■■■■□ 3.25
RDX-210ENST00000530301 CABP2Q9NPB3 220 aa35.37■■■■□ 3.25
RDX-210ENST00000530301 PTCH1Q13635 1447 aa35.36■■■■□ 3.25
RDX-210ENST00000530301 USP32Q8NFA0 1604 aa35.36■■■■□ 3.25
RDX-210ENST00000530301 CC2D1BQ5T0F9 858 aaKnown RBP35.36■■■■□ 3.25
RDX-210ENST00000530301 SLC26A8Q96RN1 970 aa35.36■■■■□ 3.25
RDX-210ENST00000530301 SLC12A5Q9H2X9 1139 aa35.36■■■■□ 3.25
RDX-210ENST00000530301 PLEKHH1Q9ULM0 1364 aa35.34■■■■□ 3.25
RDX-210ENST00000530301 TERF2IPQ9NYB0 399 aa35.33■■■■□ 3.25
RDX-210ENST00000530301 ADGRB2O60241 1585 aa35.32■■■■□ 3.24
RDX-210ENST00000530301 WASLO00401 505 aaPredicted RBP35.32■■■■□ 3.24
RDX-210ENST00000530301 AMOTL2Q9Y2J4 779 aa35.31■■■■□ 3.24
RDX-210ENST00000530301 CNGB1Q14028 1251 aaPredicted RBP35.3■■■■□ 3.24
RDX-210ENST00000530301 CCDC184Q52MB2 194 aa35.3■■■■□ 3.24
RDX-210ENST00000530301 CARD14Q9BXL6 1004 aa35.3■■■■□ 3.24
RDX-210ENST00000530301 ROBO2Q9HCK4 1378 aa35.3■■■■□ 3.24
RDX-210ENST00000530301 PTPRUQ92729 1446 aa35.29■■■■□ 3.24
RDX-210ENST00000530301 NSD2O96028 1365 aa35.28■■■■□ 3.24
RDX-210ENST00000530301 CGNL1Q0VF96 1302 aa35.27■■■■□ 3.24
RDX-210ENST00000530301 XRN1Q8IZH2 1706 aaKnown RBP35.27■■■■□ 3.24
RDX-210ENST00000530301 NSD3Q9BZ95 1437 aa35.26■■■■□ 3.24
RDX-210ENST00000530301 HDGFL2Q7Z4V5 671 aaPredicted RBP35.25■■■■□ 3.23
RDX-210ENST00000530301 ATP7BP35670 1465 aa35.23■■■■□ 3.23
RDX-210ENST00000530301 NPHP4O75161 1426 aaPredicted RBP35.23■■■■□ 3.23
RDX-210ENST00000530301 FAM9BQ8IZU0 186 aa35.22■■■■□ 3.23
RDX-210ENST00000530301 PNISRQ8TF01 805 aaKnown RBP35.22■■■■□ 3.23
RDX-210ENST00000530301 CHD2O14647 1828 aaKnown RBP35.19■■■■□ 3.22
RDX-210ENST00000530301 A0A1W2PP64 1363 aa35.17■■■■□ 3.22
RDX-210ENST00000530301 INSRP06213 1382 aa35.17■■■■□ 3.22
RDX-210ENST00000530301 CCDC61Q9Y6R9 512 aa35.17■■■■□ 3.22
RDX-210ENST00000530301 PPP2R1AP30153 589 aa35.16■■■■□ 3.22
RDX-210ENST00000530301 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.16■■■■□ 3.22
RDX-210ENST00000530301 CABP1Q9NZU7 370 aa35.14■■■■□ 3.22
RDX-210ENST00000530301 CD163L1Q9NR16 1453 aa35.12■■■■□ 3.21
RDX-210ENST00000530301 HNRNPUQ00839 825 aaKnown RBP eCLIP35.12■■■■□ 3.21
RDX-210ENST00000530301 NUDT16Q96DE0 195 aaKnown RBP35.12■■■■□ 3.21
RDX-210ENST00000530301 PPIP5K1Q6PFW1 1433 aa35.1■■■■□ 3.21
RDX-210ENST00000530301 MORC1Q86VD1 984 aa35.1■■■■□ 3.21
RDX-210ENST00000530301 ZNF692Q9BU19 519 aaPredicted RBP35.08■■■■□ 3.21
RDX-210ENST00000530301 CPSF1Q10570 1443 aaKnown RBP35.07■■■■□ 3.2
RDX-210ENST00000530301 KCNA6P17658 529 aa35.06■■■■□ 3.2
RDX-210ENST00000530301 CDC42BPGQ6DT37 1551 aa35.05■■■■□ 3.2
RDX-210ENST00000530301 ANKRD26Q9UPS8 1709 aa35.03■■■■□ 3.2
RDX-210ENST00000530301 EDC4Q6P2E9 1401 aaKnown RBP35.02■■■■□ 3.2
RDX-210ENST00000530301 TOPAZ1Q8N9V7 1692 aa35.02■■■■□ 3.2
RDX-210ENST00000530301 KDM4FA0A1W2PPD8 638 aa35.01■■■■□ 3.2
RDX-210ENST00000530301 ITSN1Q15811 1721 aa35.01■■■■□ 3.2
RDX-210ENST00000530301 ZBED9Q6R2W3 1325 aa35.01■■■■□ 3.2
RDX-210ENST00000530301 NCKAP5LQ9HCH0 1330 aa35■■■■□ 3.19
RDX-210ENST00000530301 ANKARQ7Z5J8 1434 aa35■■■■□ 3.19
RDX-210ENST00000530301 NWD1Q149M9 1564 aa35■■■■□ 3.19
RDX-210ENST00000530301 PLEKHG3A1L390 1219 aa35■■■■□ 3.19
RDX-210ENST00000530301 AKAP12Q02952 1782 aa34.98■■■■□ 3.19
RDX-210ENST00000530301 POLR3AO14802 1390 aaPredicted RBP34.98■■■■□ 3.19
RDX-210ENST00000530301 KIF20BQ96Q89 1820 aa34.98■■■■□ 3.19
RDX-210ENST00000530301 MON2Q7Z3U7 1717 aa34.96■■■■□ 3.19
RDX-210ENST00000530301 PRR36Q9H6K5 1346 aa34.96■■■■□ 3.19
RDX-210ENST00000530301 FYB1O15117 783 aa34.95■■■■□ 3.19
RDX-210ENST00000530301 WDR43Q15061 677 aaKnown RBP eCLIP34.92■■■■□ 3.18
RDX-210ENST00000530301 NKTRP30414 1462 aaKnown RBP34.91■■■■□ 3.18
RDX-210ENST00000530301 CFAP53Q96M91 514 aa34.9■■■■□ 3.18
RDX-210ENST00000530301 FMN2Q9NZ56 1722 aa34.9■■■■□ 3.18
RDX-210ENST00000530301 SCAF1Q9H7N4 1312 aaKnown RBP34.88■■■■□ 3.17
RDX-210ENST00000530301 ADGRL3Q9HAR2 1447 aa34.88■■■■□ 3.17
RDX-210ENST00000530301 BLMP54132 1417 aaPredicted RBP34.87■■■■□ 3.17
RDX-210ENST00000530301 GGNBP2Q9H3C7 697 aa34.85■■■■□ 3.17
RDX-210ENST00000530301 NALCNQ8IZF0 1738 aa34.83■■■■□ 3.17
RDX-210ENST00000530301 LMTK3Q96Q04 1460 aa34.83■■■■□ 3.17
RDX-210ENST00000530301 ACEP12821 1306 aa34.83■■■■□ 3.17
RDX-210ENST00000530301 NCOA3Q9Y6Q9 1424 aa34.82■■■■□ 3.16
RDX-210ENST00000530301 USP6P35125 1406 aa34.79■■■■□ 3.16
RDX-210ENST00000530301 MTHFSP49914 203 aa34.79■■■■□ 3.16
RDX-210ENST00000530301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.79■■■■□ 3.16
RDX-210ENST00000530301 ADAMTS8Q9UP79 889 aa34.78■■■■□ 3.16
RDX-210ENST00000530301 TTC21AQ8NDW8 1320 aa34.78■■■■□ 3.16
RDX-210ENST00000530301 NRKQ7Z2Y5 1582 aa34.77■■■■□ 3.16
RDX-210ENST00000530301 TNNT2P45379 298 aaPredicted RBP34.76■■■■□ 3.16
RDX-210ENST00000530301 PROSER2Q86WR7 435 aaPredicted RBP34.76■■■■□ 3.15
RDX-210ENST00000530301 NGEFQ8N5V2 710 aa34.75■■■■□ 3.15
RDX-210ENST00000530301 COG3Q96JB2 828 aa34.75■■■■□ 3.15
RDX-210ENST00000530301 RGPD8O14715 1765 aaPredicted RBP34.74■■■■□ 3.15
RDX-210ENST00000530301 AATKQ6ZMQ8 1374 aa34.74■■■■□ 3.15
RDX-210ENST00000530301 TTC21BQ7Z4L5 1316 aa34.74■■■■□ 3.15
RDX-210ENST00000530301 NGDNQ8NEJ9 315 aaKnown RBP34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms