RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 QRICH2Q9H0J4 1663 aa24.78■■□□□ 1.56
CLP1-204ENST00000529773 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
CLP1-204ENST00000529773 SBNO2Q9Y2G9 1366 aa24.78■■□□□ 1.56
CLP1-204ENST00000529773 C19orf44Q9H6X5 657 aa24.77■■□□□ 1.56
CLP1-204ENST00000529773 CENPJQ9HC77 1338 aaPredicted RBP24.75■■□□□ 1.55
CLP1-204ENST00000529773 FMN2Q9NZ56 1722 aa24.73■■□□□ 1.55
CLP1-204ENST00000529773 USP47Q96K76 1375 aa24.73■■□□□ 1.55
CLP1-204ENST00000529773 POGKQ9P215 609 aa24.73■■□□□ 1.55
CLP1-204ENST00000529773 MST1RQ04912 1400 aa24.7■■□□□ 1.55
CLP1-204ENST00000529773 CADPS2Q86UW7 1296 aa24.7■■□□□ 1.54
CLP1-204ENST00000529773 C14orf37Q86TY3 774 aa24.69■■□□□ 1.54
CLP1-204ENST00000529773 TULP4Q9NRJ4 1543 aa24.68■■□□□ 1.54
CLP1-204ENST00000529773 ZEB1P37275 1124 aaPredicted RBP24.67■■□□□ 1.54
CLP1-204ENST00000529773 SAFB2Q14151 953 aaKnown RBP eCLIP24.66■■□□□ 1.54
CLP1-204ENST00000529773 ATF3P18847 181 aa24.65■■□□□ 1.54
CLP1-204ENST00000529773 ANKARQ7Z5J8 1434 aa24.65■■□□□ 1.54
CLP1-204ENST00000529773 USP32Q8NFA0 1604 aa24.64■■□□□ 1.54
CLP1-204ENST00000529773 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.54
CLP1-204ENST00000529773 TOM1O60784 492 aa24.63■■□□□ 1.53
CLP1-204ENST00000529773 TESK2Q96S53 571 aa24.63■■□□□ 1.53
CLP1-204ENST00000529773 C1orf167Q5SNV9 1468 aa24.63■■□□□ 1.53
CLP1-204ENST00000529773 ST20-MTHFSA0A0A6YYL1 179 aa24.61■■□□□ 1.53
CLP1-204ENST00000529773 WASLO00401 505 aaPredicted RBP24.61■■□□□ 1.53
CLP1-204ENST00000529773 ATP7BP35670 1465 aa24.61■■□□□ 1.53
CLP1-204ENST00000529773 TOPAZ1Q8N9V7 1692 aa24.6■■□□□ 1.53
CLP1-204ENST00000529773 UBAP1LF5GYI3 381 aa24.6■■□□□ 1.53
CLP1-204ENST00000529773 HIRIP3Q9BW71 556 aaPredicted RBP24.6■■□□□ 1.53
CLP1-204ENST00000529773 SLAIN2Q9P270 581 aa24.59■■□□□ 1.53
CLP1-204ENST00000529773 SLC24A1O60721 1099 aa24.58■■□□□ 1.53
CLP1-204ENST00000529773 EIF4G2P78344 907 aaKnown RBP eCLIP24.58■■□□□ 1.53
CLP1-204ENST00000529773 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
CLP1-204ENST00000529773 ITSN1Q15811 1721 aa24.56■■□□□ 1.52
CLP1-204ENST00000529773 EVC2Q86UK5 1308 aa24.56■■□□□ 1.52
CLP1-204ENST00000529773 KIF1AQ12756 1690 aa24.55■■□□□ 1.52
CLP1-204ENST00000529773 PRR36Q9H6K5 1346 aa24.55■■□□□ 1.52
CLP1-204ENST00000529773 CDK19Q9BWU1 502 aa24.54■■□□□ 1.52
CLP1-204ENST00000529773 HSPA5P11021 654 aaKnown RBP24.53■■□□□ 1.52
CLP1-204ENST00000529773 FBXO41Q8TF61 875 aa24.53■■□□□ 1.52
CLP1-204ENST00000529773 PUS7Q96PZ0 661 aaKnown RBP24.53■■□□□ 1.52
CLP1-204ENST00000529773 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
CLP1-204ENST00000529773 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
CLP1-204ENST00000529773 RGPD8O14715 1765 aaPredicted RBP24.52■■□□□ 1.52
CLP1-204ENST00000529773 BRINP3Q76B58 766 aa24.51■■□□□ 1.51
CLP1-204ENST00000529773 ATAD2Q6PL18 1390 aa24.5■■□□□ 1.51
CLP1-204ENST00000529773 DISP3Q9P2K9 1392 aa24.5■■□□□ 1.51
CLP1-204ENST00000529773 NUDT16Q96DE0 195 aaKnown RBP24.47■■□□□ 1.51
CLP1-204ENST00000529773 SRPK2P78362 688 aaKnown RBP24.46■■□□□ 1.51
CLP1-204ENST00000529773 TMF1P82094 1093 aa24.46■■□□□ 1.51
CLP1-204ENST00000529773 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
CLP1-204ENST00000529773 CABP2Q9NPB3 220 aa24.45■■□□□ 1.5
CLP1-204ENST00000529773 CCDC61Q9Y6R9 512 aa24.45■■□□□ 1.5
CLP1-204ENST00000529773 NUTM2FA1L443 756 aa24.44■■□□□ 1.5
CLP1-204ENST00000529773 PIP4K2BP78356 416 aa24.44■■□□□ 1.5
CLP1-204ENST00000529773 POLR3AO14802 1390 aaPredicted RBP24.43■■□□□ 1.5
CLP1-204ENST00000529773 PPIP5K1Q6PFW1 1433 aa24.43■■□□□ 1.5
CLP1-204ENST00000529773 COL16A1Q07092 1604 aaPredicted RBP24.43■■□□□ 1.5
CLP1-204ENST00000529773 NINLQ9Y2I6 1382 aa24.42■■□□□ 1.5
CLP1-204ENST00000529773 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
CLP1-204ENST00000529773 ESCO1Q5FWF5 840 aa24.42■■□□□ 1.5
CLP1-204ENST00000529773 PHF8Q9UPP1 1060 aa24.42■■□□□ 1.5
CLP1-204ENST00000529773 PXDNQ92626 1479 aa24.41■■□□□ 1.5
CLP1-204ENST00000529773 CDCA8Q53HL2 280 aa24.41■■□□□ 1.5
CLP1-204ENST00000529773 MYOM1P52179 1685 aa24.4■■□□□ 1.5
CLP1-204ENST00000529773 PHLPP1O60346 1717 aa24.39■■□□□ 1.5
CLP1-204ENST00000529773 NPHP3Q7Z494 1330 aa24.38■■□□□ 1.49
CLP1-204ENST00000529773 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
CLP1-204ENST00000529773 SCAF1Q9H7N4 1312 aaKnown RBP24.37■■□□□ 1.49
CLP1-204ENST00000529773 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
CLP1-204ENST00000529773 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
CLP1-204ENST00000529773 TRPM3Q9HCF6 1732 aaPredicted RBP24.36■■□□□ 1.49
CLP1-204ENST00000529773 CPSF1Q10570 1443 aaKnown RBP24.35■■□□□ 1.49
CLP1-204ENST00000529773 NRKQ7Z2Y5 1582 aa24.33■■□□□ 1.49
CLP1-204ENST00000529773 MON2Q7Z3U7 1717 aa24.33■■□□□ 1.49
CLP1-204ENST00000529773 CABP1Q9NZU7 370 aa24.33■■□□□ 1.49
CLP1-204ENST00000529773 C11orf95C9JLR9 678 aaPredicted RBP24.32■■□□□ 1.48
CLP1-204ENST00000529773 FOXO3O43524 673 aa24.32■■□□□ 1.48
CLP1-204ENST00000529773 PMFBP1Q8TBY8 1022 aa24.32■■□□□ 1.48
CLP1-204ENST00000529773 ACEP12821 1306 aa24.32■■□□□ 1.48
CLP1-204ENST00000529773 SBNO1A3KN83 1393 aa24.31■■□□□ 1.48
CLP1-204ENST00000529773 BRD4O60885 1362 aaPredicted RBP24.31■■□□□ 1.48
CLP1-204ENST00000529773 SSH2Q76I76 1423 aa24.31■■□□□ 1.48
CLP1-204ENST00000529773 KIF7Q2M1P5 1343 aa24.31■■□□□ 1.48
CLP1-204ENST00000529773 USP6P35125 1406 aa24.3■■□□□ 1.48
CLP1-204ENST00000529773 HSPA1LP34931 641 aa24.3■■□□□ 1.48
CLP1-204ENST00000529773 DDX17Q92841 729 aaKnown RBP24.29■■□□□ 1.48
CLP1-204ENST00000529773 ALS2Q96Q42 1657 aa24.29■■□□□ 1.48
CLP1-204ENST00000529773 ANKRD36BQ8N2N9 1353 aa24.29■■□□□ 1.48
CLP1-204ENST00000529773 SHPRHQ149N8 1683 aa24.28■■□□□ 1.48
CLP1-204ENST00000529773 NGDNQ8NEJ9 315 aaKnown RBP24.28■■□□□ 1.48
CLP1-204ENST00000529773 A0A1W2PP64 1363 aa24.28■■□□□ 1.48
CLP1-204ENST00000529773 CCDC7Q96M83 1385 aa24.28■■□□□ 1.48
CLP1-204ENST00000529773 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
CLP1-204ENST00000529773 SLC12A5Q9H2X9 1139 aa24.27■■□□□ 1.48
CLP1-204ENST00000529773 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
CLP1-204ENST00000529773 KRT28Q7Z3Y7 464 aa24.25■■□□□ 1.47
CLP1-204ENST00000529773 ZNF692Q9BU19 519 aaPredicted RBP24.25■■□□□ 1.47
CLP1-204ENST00000529773 WASHC2AQ641Q2 1341 aa24.25■■□□□ 1.47
CLP1-204ENST00000529773 PSME1Q06323 249 aa24.24■■□□□ 1.47
CLP1-204ENST00000529773 ILDR1Q86SU0 546 aaPredicted RBP24.24■■□□□ 1.47
CLP1-204ENST00000529773 MED1Q15648 1581 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms