RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SPDYE6P0CI01 402 aa9.1□□□□□ -0.95
ATPAF1-209ENST00000529214 SPDYE2Q495Y8 402 aa9.1□□□□□ -0.95
ATPAF1-209ENST00000529214 TBX22Q9Y458 520 aa9.1□□□□□ -0.95
ATPAF1-209ENST00000529214 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
ATPAF1-209ENST00000529214 MYO5BQ9ULV0 1848 aa9.09□□□□□ -0.95
ATPAF1-209ENST00000529214 SPDYE1Q8NFV5 336 aaPredicted RBP9.09□□□□□ -0.95
ATPAF1-209ENST00000529214 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
ATPAF1-209ENST00000529214 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
ATPAF1-209ENST00000529214 KIF1BO60333 1816 aa9.08□□□□□ -0.96
ATPAF1-209ENST00000529214 DHX57Q6P158 1386 aaKnown RBP9.08□□□□□ -0.96
ATPAF1-209ENST00000529214 IQGAP1P46940 1657 aa9.07□□□□□ -0.96
ATPAF1-209ENST00000529214 KCNA6P17658 529 aa9.07□□□□□ -0.96
ATPAF1-209ENST00000529214 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
ATPAF1-209ENST00000529214 ADAMTS13Q76LX8 1427 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 NEXMIFQ5QGS0 1516 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 LTBP4Q8N2S1 1624 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 SIN3AQ96ST3 1273 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 ADGRF5Q8IZF2 1346 aa9.06□□□□□ -0.96
ATPAF1-209ENST00000529214 DCAF11Q8TEB1 546 aa9.04□□□□□ -0.96
ATPAF1-209ENST00000529214 PIK3R4Q99570 1358 aa9.03□□□□□ -0.96
ATPAF1-209ENST00000529214 PLEKHG5O94827 1062 aa9.03□□□□□ -0.96
ATPAF1-209ENST00000529214 NEUROD1Q13562 356 aa9.03□□□□□ -0.96
ATPAF1-209ENST00000529214 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
ATPAF1-209ENST00000529214 SETBP1Q9Y6X0 1596 aa9.03□□□□□ -0.96
ATPAF1-209ENST00000529214 METP08581 1390 aa9.03□□□□□ -0.96
ATPAF1-209ENST00000529214 NPM2Q86SE8 214 aaKnown RBP9.02□□□□□ -0.96
ATPAF1-209ENST00000529214 C14orf93Q9H972 538 aaKnown RBP9.02□□□□□ -0.96
ATPAF1-209ENST00000529214 CPS1P31327 1500 aa9.02□□□□□ -0.97
ATPAF1-209ENST00000529214 PROSER2Q86WR7 435 aaPredicted RBP9.02□□□□□ -0.97
ATPAF1-209ENST00000529214 PTPRUQ92729 1446 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 PPLO60437 1756 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 RGL2O15211 777 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 CFAP70Q5T0N1 1121 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 L3MBTL2Q969R5 705 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 DIP2AQ14689 1571 aa9.01□□□□□ -0.97
ATPAF1-209ENST00000529214 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
ATPAF1-209ENST00000529214 FBXO41Q8TF61 875 aa9□□□□□ -0.97
ATPAF1-209ENST00000529214 SPOCK2Q92563 424 aa9□□□□□ -0.97
ATPAF1-209ENST00000529214 RBM33Q96EV2 1170 aaKnown RBP9□□□□□ -0.97
ATPAF1-209ENST00000529214 STRCP1A6NGW2 1772 aa9□□□□□ -0.97
ATPAF1-209ENST00000529214 IQSEC2Q5JU85 1478 aa9□□□□□ -0.97
ATPAF1-209ENST00000529214 NRXN1Q9ULB1 1477 aa9□□□□□ -0.97
ATPAF1-209ENST00000529214 PIK3C2GO75747 1445 aa8.99□□□□□ -0.97
ATPAF1-209ENST00000529214 ALKQ9UM73 1620 aa8.99□□□□□ -0.97
ATPAF1-209ENST00000529214 TMEM132EQ6IEE7 984 aa8.99□□□□□ -0.97
ATPAF1-209ENST00000529214 MYOM2P54296 1465 aa8.99□□□□□ -0.97
ATPAF1-209ENST00000529214 CHD2O14647 1828 aaKnown RBP8.99□□□□□ -0.97
ATPAF1-209ENST00000529214 TMEM94Q12767 1356 aa8.99□□□□□ -0.97
ATPAF1-209ENST00000529214 CLSPNQ9HAW4 1339 aa8.98□□□□□ -0.97
ATPAF1-209ENST00000529214 IFT172Q9UG01 1749 aa8.98□□□□□ -0.97
ATPAF1-209ENST00000529214 TOM1O60784 492 aa8.97□□□□□ -0.97
ATPAF1-209ENST00000529214 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
ATPAF1-209ENST00000529214 NWD1Q149M9 1564 aa8.97□□□□□ -0.97
ATPAF1-209ENST00000529214 NKTRP30414 1462 aaKnown RBP8.97□□□□□ -0.97
ATPAF1-209ENST00000529214 UBAP1LF5GYI3 381 aa8.96□□□□□ -0.97
ATPAF1-209ENST00000529214 SIRT1Q96EB6 747 aa8.96□□□□□ -0.97
ATPAF1-209ENST00000529214 C19orf44Q9H6X5 657 aa8.96□□□□□ -0.97
ATPAF1-209ENST00000529214 STK26Q9P289 416 aa8.96□□□□□ -0.97
ATPAF1-209ENST00000529214 ABCC11Q96J66 1382 aa8.96□□□□□ -0.97
ATPAF1-209ENST00000529214 ILDR1Q86SU0 546 aaPredicted RBP8.96□□□□□ -0.98
ATPAF1-209ENST00000529214 CCER1Q8TC90 406 aaPredicted RBP8.96□□□□□ -0.98
ATPAF1-209ENST00000529214 LRPPRCP42704 1394 aaKnown RBP8.95□□□□□ -0.98
ATPAF1-209ENST00000529214 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
ATPAF1-209ENST00000529214 SETD1AO15047 1707 aaKnown RBP8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 PRAG1Q86YV5 1406 aa8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 YTHDC2Q9H6S0 1430 aaKnown RBP8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 NBPF1Q3BBV0 1214 aa8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 WAPLQ7Z5K2 1190 aa8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 TONSLQ96HA7 1378 aa8.94□□□□□ -0.98
ATPAF1-209ENST00000529214 CLCN6P51797 869 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 NBPF8Q3BBV2 869 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 TRAK1Q9UPV9 953 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 MSH6P52701 1360 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 XRN1Q8IZH2 1706 aaKnown RBP8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 ASXL1Q8IXJ9 1541 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 TECPR2O15040 1411 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 PTCH1Q13635 1447 aa8.93□□□□□ -0.98
ATPAF1-209ENST00000529214 ATF3P18847 181 aa8.92□□□□□ -0.98
ATPAF1-209ENST00000529214 PIP4K2BP78356 416 aa8.92□□□□□ -0.98
ATPAF1-209ENST00000529214 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
ATPAF1-209ENST00000529214 SLAIN2Q9P270 581 aa8.92□□□□□ -0.98
ATPAF1-209ENST00000529214 XIRP1Q702N8 1843 aaKnown RBP8.92□□□□□ -0.98
ATPAF1-209ENST00000529214 ADGRB1O14514 1584 aa8.91□□□□□ -0.98
ATPAF1-209ENST00000529214 FAM135BQ49AJ0 1406 aa8.91□□□□□ -0.98
ATPAF1-209ENST00000529214 LAMC1P11047 1609 aa8.91□□□□□ -0.98
ATPAF1-209ENST00000529214 CHADLQ6NUI6 762 aa8.9□□□□□ -0.98
ATPAF1-209ENST00000529214 PRAM1Q96QH2 718 aa8.9□□□□□ -0.98
ATPAF1-209ENST00000529214 PLEKHH1Q9ULM0 1364 aa8.9□□□□□ -0.99
ATPAF1-209ENST00000529214 POGKQ9P215 609 aa8.89□□□□□ -0.99
ATPAF1-209ENST00000529214 DCCP43146 1447 aa8.89□□□□□ -0.99
ATPAF1-209ENST00000529214 ADGRL3Q9HAR2 1447 aa8.89□□□□□ -0.99
ATPAF1-209ENST00000529214 SSUH2Q9Y2M2 353 aa8.89□□□□□ -0.99
ATPAF1-209ENST00000529214 DLC1Q96QB1 1528 aa8.88□□□□□ -0.99
ATPAF1-209ENST00000529214 SAFB2Q14151 953 aaKnown RBP eCLIP8.88□□□□□ -0.99
ATPAF1-209ENST00000529214 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
ATPAF1-209ENST00000529214 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms