RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 GPATCH3Q96I76 525 aa9.9□□□□□ -0.82
FDFT1-213ENST00000528729 DNAJC2Q99543 621 aaKnown RBP9.9□□□□□ -0.82
FDFT1-213ENST00000528729 TANGO6Q9C0B7 1094 aa9.9□□□□□ -0.82
FDFT1-213ENST00000528729 BIN2Q9UBW5 565 aaPredicted RBP9.9□□□□□ -0.82
FDFT1-213ENST00000528729 IGBP1P78318 339 aa9.89□□□□□ -0.83
FDFT1-213ENST00000528729 SERPINB4P48594 390 aa9.88□□□□□ -0.83
FDFT1-213ENST00000528729 SDE2Q6IQ49 451 aa9.88□□□□□ -0.83
FDFT1-213ENST00000528729 TEX2Q8IWB9 1127 aa9.88□□□□□ -0.83
FDFT1-213ENST00000528729 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
FDFT1-213ENST00000528729 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
FDFT1-213ENST00000528729 ATP9BO43861 1147 aa9.87□□□□□ -0.83
FDFT1-213ENST00000528729 LILRB3O75022 631 aa9.87□□□□□ -0.83
FDFT1-213ENST00000528729 MCCD1P59942 119 aaPredicted RBP9.87□□□□□ -0.83
FDFT1-213ENST00000528729 KANK4Q5T7N3 995 aaPredicted RBP9.87□□□□□ -0.83
FDFT1-213ENST00000528729 METTL3Q86U44 580 aaKnown RBP9.87□□□□□ -0.83
FDFT1-213ENST00000528729 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
FDFT1-213ENST00000528729 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
FDFT1-213ENST00000528729 MAGEC2Q9UBF1 373 aaPredicted RBP9.87□□□□□ -0.83
FDFT1-213ENST00000528729 hCG_2014768A0A024R1R8 64 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 SCAMP3O14828 347 aaKnown RBP9.86□□□□□ -0.83
FDFT1-213ENST00000528729 PTPROQ16827 1216 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 RSBN1LQ6PCB5 846 aaPredicted RBP9.86□□□□□ -0.83
FDFT1-213ENST00000528729 TBC1D9Q6ZT07 1266 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 MORC4Q8TE76 937 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 KCNB2Q92953 911 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 KLHL42Q9P2K6 505 aa9.86□□□□□ -0.83
FDFT1-213ENST00000528729 NOVA2Q9UNW9 492 aaKnown RBP9.86□□□□□ -0.83
FDFT1-213ENST00000528729 OATP04181 439 aa9.85□□□□□ -0.83
FDFT1-213ENST00000528729 HDLBPQ00341 1268 aaKnown RBP9.85□□□□□ -0.83
FDFT1-213ENST00000528729 TAGLNQ01995 201 aaKnown RBP9.85□□□□□ -0.83
FDFT1-213ENST00000528729 HSP90AB4PQ58FF6 505 aa9.85□□□□□ -0.83
FDFT1-213ENST00000528729 ARMC5Q96C12 935 aa9.85□□□□□ -0.83
FDFT1-213ENST00000528729 TBX22Q9Y458 520 aa9.85□□□□□ -0.83
FDFT1-213ENST00000528729 ATAD2BQ9ULI0 1458 aa9.85□□□□□ -0.83
FDFT1-213ENST00000528729 GJA5P36382 358 aa9.84□□□□□ -0.83
FDFT1-213ENST00000528729 SETQ01105 290 aaPredicted RBP9.84□□□□□ -0.83
FDFT1-213ENST00000528729 QPCTQ16769 361 aa9.84□□□□□ -0.83
FDFT1-213ENST00000528729 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
FDFT1-213ENST00000528729 SPACA7Q96KW9 195 aa9.84□□□□□ -0.83
FDFT1-213ENST00000528729 LZTS3O60299 673 aaPredicted RBP9.83□□□□□ -0.84
FDFT1-213ENST00000528729 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
FDFT1-213ENST00000528729 CCDC144BQ3MJ40 725 aa9.83□□□□□ -0.84
FDFT1-213ENST00000528729 BACH2Q9BYV9 841 aa9.83□□□□□ -0.84
FDFT1-213ENST00000528729 BRINP2Q9C0B6 783 aa9.83□□□□□ -0.84
FDFT1-213ENST00000528729 CDHR5Q9HBB8 845 aa9.83□□□□□ -0.84
FDFT1-213ENST00000528729 PSME1Q06323 249 aa9.82□□□□□ -0.84
FDFT1-213ENST00000528729 COL19A1Q14993 1142 aa9.82□□□□□ -0.84
FDFT1-213ENST00000528729 CSPP1Q1MSJ5 1256 aa9.82□□□□□ -0.84
FDFT1-213ENST00000528729 RTL5Q5HYW3 569 aaPredicted RBP9.82□□□□□ -0.84
FDFT1-213ENST00000528729 SLC43A3Q8NBI5 491 aa9.82□□□□□ -0.84
FDFT1-213ENST00000528729 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
FDFT1-213ENST00000528729 RAD51AP2Q09MP3 1159 aa9.81□□□□□ -0.84
FDFT1-213ENST00000528729 SEMA3FQ13275 785 aa9.81□□□□□ -0.84
FDFT1-213ENST00000528729 CLP1Q92989 425 aaKnown RBP9.81□□□□□ -0.84
FDFT1-213ENST00000528729 TINF2Q9BSI4 451 aa9.81□□□□□ -0.84
FDFT1-213ENST00000528729 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
FDFT1-213ENST00000528729 SLAIN2Q9P270 581 aa9.81□□□□□ -0.84
FDFT1-213ENST00000528729 PRKAG2Q9UGJ0 569 aa9.81□□□□□ -0.84
FDFT1-213ENST00000528729 MAFGO15525 162 aa9.8□□□□□ -0.84
FDFT1-213ENST00000528729 MAP3K13O43283 966 aa9.8□□□□□ -0.84
FDFT1-213ENST00000528729 ATP2B1P20020 1258 aa9.8□□□□□ -0.84
FDFT1-213ENST00000528729 DHX38Q92620 1227 aaKnown RBP9.8□□□□□ -0.84
FDFT1-213ENST00000528729 NLRP2Q9NX02 1062 aa9.8□□□□□ -0.84
FDFT1-213ENST00000528729 SMARCA2P51531 1590 aa9.8□□□□□ -0.84
FDFT1-213ENST00000528729 PARNO95453 639 aaKnown RBP9.79□□□□□ -0.84
FDFT1-213ENST00000528729 MRPL58Q14197 206 aaKnown RBP9.79□□□□□ -0.84
FDFT1-213ENST00000528729 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
FDFT1-213ENST00000528729 MAP4K4O95819 1239 aaPredicted RBP9.78□□□□□ -0.84
FDFT1-213ENST00000528729 ANAPC15P60006 121 aa9.78□□□□□ -0.84
FDFT1-213ENST00000528729 C9orf131Q5VYM1 1079 aa9.78□□□□□ -0.84
FDFT1-213ENST00000528729 SMC5Q8IY18 1101 aa9.78□□□□□ -0.84
FDFT1-213ENST00000528729 VTI1AQ96AJ9 217 aa9.78□□□□□ -0.84
FDFT1-213ENST00000528729 ASB16Q96NS5 453 aa9.78□□□□□ -0.84
FDFT1-213ENST00000528729 NOP58Q9Y2X3 529 aaKnown RBP9.78□□□□□ -0.84
FDFT1-213ENST00000528729 ERCC6Q03468 1493 aa9.78□□□□□ -0.84
FDFT1-213ENST00000528729 HSP90AB2PQ58FF8 381 aa9.77□□□□□ -0.85
FDFT1-213ENST00000528729 NLGN1Q8N2Q7 840 aa9.77□□□□□ -0.85
FDFT1-213ENST00000528729 ZCRB1Q8TBF4 217 aaKnown RBP9.77□□□□□ -0.85
FDFT1-213ENST00000528729 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
FDFT1-213ENST00000528729 HMX1Q9NP08 348 aaPredicted RBP9.77□□□□□ -0.85
FDFT1-213ENST00000528729 CUX2O14529 1486 aa9.77□□□□□ -0.85
FDFT1-213ENST00000528729 CCDC194A0A1B0GVG4 234 aa9.76□□□□□ -0.85
FDFT1-213ENST00000528729 FAM196BA6NMK8 535 aa9.76□□□□□ -0.85
FDFT1-213ENST00000528729 NUTM2BA6NNL0 878 aaPredicted RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 NUTM2EB1AL46 878 aaPredicted RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 HMGB1P1B2RPK0 211 aaPredicted RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 PEX14O75381 377 aa9.76□□□□□ -0.85
FDFT1-213ENST00000528729 ATP2B4P23634 1241 aa9.76□□□□□ -0.85
FDFT1-213ENST00000528729 EN1Q05925 392 aaPredicted RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 PRPF38BQ5VTL8 546 aaKnown RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 NUTM2AQ8IVF1 878 aaPredicted RBP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 UPF1Q92900 1129 aaKnown RBP eCLIP9.76□□□□□ -0.85
FDFT1-213ENST00000528729 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
FDFT1-213ENST00000528729 EGFL7Q9UHF1 273 aa9.76□□□□□ -0.85
FDFT1-213ENST00000528729 MOXD2PA6NHM9 499 aa9.75□□□□□ -0.85
FDFT1-213ENST00000528729 EIF3JO75822 258 aaKnown RBP9.75□□□□□ -0.85
FDFT1-213ENST00000528729 CENPBP07199 599 aaPredicted RBP9.75□□□□□ -0.85
FDFT1-213ENST00000528729 GTF2F1P35269 517 aaKnown RBP eCLIP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms