RNA–Protein interactions for RNA: ENST00000528276.1

CHEK1-210, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 1,814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-210ENST00000528276 ATAD2Q6PL18 1390 aa19.1■□□□□ 0.65
CHEK1-210ENST00000528276 MYOM1P52179 1685 aa19.1■□□□□ 0.65
CHEK1-210ENST00000528276 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
CHEK1-210ENST00000528276 NINLQ9Y2I6 1382 aa19.1■□□□□ 0.65
CHEK1-210ENST00000528276 DLC1Q96QB1 1528 aa19.09■□□□□ 0.65
CHEK1-210ENST00000528276 CARD14Q9BXL6 1004 aa19.09■□□□□ 0.65
CHEK1-210ENST00000528276 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
CHEK1-210ENST00000528276 CDK19Q9BWU1 502 aa19.09■□□□□ 0.65
CHEK1-210ENST00000528276 PPP2R1AP30153 589 aa19.07■□□□□ 0.64
CHEK1-210ENST00000528276 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
CHEK1-210ENST00000528276 TERF2IPQ9NYB0 399 aa19.07■□□□□ 0.64
CHEK1-210ENST00000528276 CGNL1Q0VF96 1302 aa19.07■□□□□ 0.64
CHEK1-210ENST00000528276 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
CHEK1-210ENST00000528276 ANKRD36BQ8N2N9 1353 aa19.06■□□□□ 0.64
CHEK1-210ENST00000528276 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
CHEK1-210ENST00000528276 SLC26A8Q96RN1 970 aa19.06■□□□□ 0.64
CHEK1-210ENST00000528276 NRXN3Q9Y4C0 1643 aa19.05■□□□□ 0.64
CHEK1-210ENST00000528276 SLIT1O75093 1534 aa19.05■□□□□ 0.64
CHEK1-210ENST00000528276 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
CHEK1-210ENST00000528276 RIMS1Q86UR5 1692 aaKnown RBP19.04■□□□□ 0.64
CHEK1-210ENST00000528276 HDGFL2Q7Z4V5 671 aaPredicted RBP19.04■□□□□ 0.64
CHEK1-210ENST00000528276 ARHGAP23Q9P227 1491 aa19.03■□□□□ 0.64
CHEK1-210ENST00000528276 FAM135BQ49AJ0 1406 aa19.03■□□□□ 0.64
CHEK1-210ENST00000528276 PLEKHH1Q9ULM0 1364 aa19.03■□□□□ 0.64
CHEK1-210ENST00000528276 ADAMTS13Q76LX8 1427 aa19.03■□□□□ 0.64
CHEK1-210ENST00000528276 TBX22Q9Y458 520 aa19.02■□□□□ 0.64
CHEK1-210ENST00000528276 WDR43Q15061 677 aaKnown RBP eCLIP19.02■□□□□ 0.63
CHEK1-210ENST00000528276 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
CHEK1-210ENST00000528276 TECPR2O15040 1411 aa19.01■□□□□ 0.63
CHEK1-210ENST00000528276 SETD1AO15047 1707 aaKnown RBP19.01■□□□□ 0.63
CHEK1-210ENST00000528276 ANKLE2Q86XL3 938 aa19■□□□□ 0.63
CHEK1-210ENST00000528276 CEP170BQ9Y4F5 1589 aaPredicted RBP19■□□□□ 0.63
CHEK1-210ENST00000528276 CABP1Q9NZU7 370 aa19■□□□□ 0.63
CHEK1-210ENST00000528276 NEFLP07196 543 aa18.98■□□□□ 0.63
CHEK1-210ENST00000528276 AMOTL2Q9Y2J4 779 aa18.98■□□□□ 0.63
CHEK1-210ENST00000528276 NSD2O96028 1365 aa18.98■□□□□ 0.63
CHEK1-210ENST00000528276 A0A1W2PP64 1363 aa18.97■□□□□ 0.63
CHEK1-210ENST00000528276 ADAMTSL3P82987 1691 aa18.97■□□□□ 0.63
CHEK1-210ENST00000528276 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
CHEK1-210ENST00000528276 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
CHEK1-210ENST00000528276 CPS1P31327 1500 aa18.95■□□□□ 0.62
CHEK1-210ENST00000528276 MED14O60244 1454 aa18.94■□□□□ 0.62
CHEK1-210ENST00000528276 NUDT16Q96DE0 195 aaKnown RBP18.93■□□□□ 0.62
CHEK1-210ENST00000528276 INSRP06213 1382 aa18.93■□□□□ 0.62
CHEK1-210ENST00000528276 CCDC61Q9Y6R9 512 aa18.93■□□□□ 0.62
CHEK1-210ENST00000528276 KNDC1Q76NI1 1749 aa18.93■□□□□ 0.62
CHEK1-210ENST00000528276 CFAP53Q96M91 514 aa18.92■□□□□ 0.62
CHEK1-210ENST00000528276 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
CHEK1-210ENST00000528276 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
CHEK1-210ENST00000528276 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
CHEK1-210ENST00000528276 PPIP5K1Q6PFW1 1433 aa18.9■□□□□ 0.62
CHEK1-210ENST00000528276 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
CHEK1-210ENST00000528276 GGNBP2Q9H3C7 697 aa18.89■□□□□ 0.61
CHEK1-210ENST00000528276 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.61
CHEK1-210ENST00000528276 PIK3R4Q99570 1358 aa18.89■□□□□ 0.61
CHEK1-210ENST00000528276 PTPRUQ92729 1446 aa18.89■□□□□ 0.61
CHEK1-210ENST00000528276 ATP7BP35670 1465 aa18.89■□□□□ 0.61
CHEK1-210ENST00000528276 PTCH1Q13635 1447 aa18.87■□□□□ 0.61
CHEK1-210ENST00000528276 POLR3AO14802 1390 aaPredicted RBP18.87■□□□□ 0.61
CHEK1-210ENST00000528276 FYB1O15117 783 aa18.87■□□□□ 0.61
CHEK1-210ENST00000528276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
CHEK1-210ENST00000528276 MTHFSP49914 203 aa18.86■□□□□ 0.61
CHEK1-210ENST00000528276 ZNF692Q9BU19 519 aaPredicted RBP18.86■□□□□ 0.61
CHEK1-210ENST00000528276 CD163L1Q9NR16 1453 aa18.86■□□□□ 0.61
CHEK1-210ENST00000528276 BLMP54132 1417 aaPredicted RBP18.86■□□□□ 0.61
CHEK1-210ENST00000528276 SUPT16HQ9Y5B9 1047 aaKnown RBP18.86■□□□□ 0.61
CHEK1-210ENST00000528276 FKBP8Q14318 412 aa18.85■□□□□ 0.61
CHEK1-210ENST00000528276 ZNF142P52746 1687 aaPredicted RBP18.85■□□□□ 0.61
CHEK1-210ENST00000528276 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
CHEK1-210ENST00000528276 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
CHEK1-210ENST00000528276 NUTM2FA1L443 756 aa18.84■□□□□ 0.61
CHEK1-210ENST00000528276 KCNA6P17658 529 aa18.84■□□□□ 0.61
CHEK1-210ENST00000528276 SMG6Q86US8 1419 aaKnown RBP18.82■□□□□ 0.6
CHEK1-210ENST00000528276 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
CHEK1-210ENST00000528276 EDC4Q6P2E9 1401 aaKnown RBP18.82■□□□□ 0.6
CHEK1-210ENST00000528276 CPSF1Q10570 1443 aaKnown RBP18.81■□□□□ 0.6
CHEK1-210ENST00000528276 SETD1BQ9UPS6 1966 aaKnown RBP18.81■□□□□ 0.6
CHEK1-210ENST00000528276 ADGRB2O60241 1585 aa18.8■□□□□ 0.6
CHEK1-210ENST00000528276 PRR36Q9H6K5 1346 aa18.8■□□□□ 0.6
CHEK1-210ENST00000528276 NPHP4O75161 1426 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-210ENST00000528276 CCDC146Q8IYE0 955 aa18.79■□□□□ 0.6
CHEK1-210ENST00000528276 COG3Q96JB2 828 aa18.78■□□□□ 0.6
CHEK1-210ENST00000528276 PLEKHG3A1L390 1219 aa18.77■□□□□ 0.6
CHEK1-210ENST00000528276 CDC42BPGQ6DT37 1551 aa18.77■□□□□ 0.6
CHEK1-210ENST00000528276 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.6
CHEK1-210ENST00000528276 ACEP12821 1306 aa18.76■□□□□ 0.59
CHEK1-210ENST00000528276 NGDNQ8NEJ9 315 aaKnown RBP18.76■□□□□ 0.59
CHEK1-210ENST00000528276 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
CHEK1-210ENST00000528276 NME9Q86XW9 330 aa18.74■□□□□ 0.59
CHEK1-210ENST00000528276 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
CHEK1-210ENST00000528276 XRN1Q8IZH2 1706 aaKnown RBP18.74■□□□□ 0.59
CHEK1-210ENST00000528276 APAF1O14727 1248 aa18.74■□□□□ 0.59
CHEK1-210ENST00000528276 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
CHEK1-210ENST00000528276 U2AF1L5P0DN76 240 aaPredicted RBP18.74■□□□□ 0.59
CHEK1-210ENST00000528276 U2AF1Q01081 240 aaKnown RBP eCLIP18.74■□□□□ 0.598e-7■□□□□ 8.6
CHEK1-210ENST00000528276 PMFBP1Q8TBY8 1022 aa18.73■□□□□ 0.59
CHEK1-210ENST00000528276 U2SURPO15042 1029 aaKnown RBP18.72■□□□□ 0.59
CHEK1-210ENST00000528276 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
CHEK1-210ENST00000528276 DIAPH1O60610 1272 aaKnown RBP18.71■□□□□ 0.59
CHEK1-210ENST00000528276 TTC21BQ7Z4L5 1316 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms