RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
PSMD13-206ENST00000527047 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.31
PSMD13-206ENST00000527047 LAMC1P11047 1609 aa17.01■□□□□ 0.31
PSMD13-206ENST00000527047 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
PSMD13-206ENST00000527047 SLC26A8Q96RN1 970 aa17.01■□□□□ 0.31
PSMD13-206ENST00000527047 CHD2O14647 1828 aaKnown RBP17■□□□□ 0.31
PSMD13-206ENST00000527047 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
PSMD13-206ENST00000527047 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
PSMD13-206ENST00000527047 STRCP1A6NGW2 1772 aa16.99■□□□□ 0.31
PSMD13-206ENST00000527047 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
PSMD13-206ENST00000527047 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
PSMD13-206ENST00000527047 BCANQ96GW7 911 aa16.98■□□□□ 0.31
PSMD13-206ENST00000527047 METP08581 1390 aa16.98■□□□□ 0.31
PSMD13-206ENST00000527047 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
PSMD13-206ENST00000527047 GABBR2O75899 941 aa16.96■□□□□ 0.31
PSMD13-206ENST00000527047 ADGRB1O14514 1584 aa16.96■□□□□ 0.31
PSMD13-206ENST00000527047 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.3
PSMD13-206ENST00000527047 TRPM1Q7Z4N2 1603 aa16.96■□□□□ 0.3
PSMD13-206ENST00000527047 LTBP4Q8N2S1 1624 aa16.96■□□□□ 0.3
PSMD13-206ENST00000527047 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
PSMD13-206ENST00000527047 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
PSMD13-206ENST00000527047 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
PSMD13-206ENST00000527047 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
PSMD13-206ENST00000527047 KCNA6P17658 529 aa16.93■□□□□ 0.3
PSMD13-206ENST00000527047 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
PSMD13-206ENST00000527047 KNDC1Q76NI1 1749 aa16.9■□□□□ 0.3
PSMD13-206ENST00000527047 TECPR2O15040 1411 aa16.9■□□□□ 0.3
PSMD13-206ENST00000527047 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
PSMD13-206ENST00000527047 CPS1P31327 1500 aa16.9■□□□□ 0.3
PSMD13-206ENST00000527047 LRPPRCP42704 1394 aaKnown RBP16.89■□□□□ 0.3
PSMD13-206ENST00000527047 YTHDC2Q9H6S0 1430 aaKnown RBP16.89■□□□□ 0.29
PSMD13-206ENST00000527047 RALGAPBQ86X10 1494 aa16.89■□□□□ 0.29
PSMD13-206ENST00000527047 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
PSMD13-206ENST00000527047 AMOTL2Q9Y2J4 779 aa16.89■□□□□ 0.29
PSMD13-206ENST00000527047 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
PSMD13-206ENST00000527047 ZRANB1Q9UGI0 708 aa16.88■□□□□ 0.29
PSMD13-206ENST00000527047 XIRP1Q702N8 1843 aaKnown RBP16.88■□□□□ 0.29
PSMD13-206ENST00000527047 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
PSMD13-206ENST00000527047 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
PSMD13-206ENST00000527047 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
PSMD13-206ENST00000527047 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
PSMD13-206ENST00000527047 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
PSMD13-206ENST00000527047 ARHGEF28Q8N1W1 1705 aaKnown RBP16.84■□□□□ 0.29
PSMD13-206ENST00000527047 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
PSMD13-206ENST00000527047 FAM135BQ49AJ0 1406 aa16.83■□□□□ 0.28
PSMD13-206ENST00000527047 MIER1Q8N108 512 aa16.83■□□□□ 0.28
PSMD13-206ENST00000527047 SIRT1Q96EB6 747 aa16.83■□□□□ 0.28
PSMD13-206ENST00000527047 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
PSMD13-206ENST00000527047 STK26Q9P289 416 aa16.81■□□□□ 0.28
PSMD13-206ENST00000527047 TMEM94Q12767 1356 aa16.8■□□□□ 0.28
PSMD13-206ENST00000527047 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
PSMD13-206ENST00000527047 IQSEC2Q5JU85 1478 aa16.8■□□□□ 0.28
PSMD13-206ENST00000527047 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
PSMD13-206ENST00000527047 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
PSMD13-206ENST00000527047 NALCNQ8IZF0 1738 aa16.78■□□□□ 0.28
PSMD13-206ENST00000527047 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.78■□□□□ 0.28
PSMD13-206ENST00000527047 PLEKHH1Q9ULM0 1364 aa16.77■□□□□ 0.28
PSMD13-206ENST00000527047 WAPLQ7Z5K2 1190 aa16.77■□□□□ 0.28
PSMD13-206ENST00000527047 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
PSMD13-206ENST00000527047 RBM33Q96EV2 1170 aaKnown RBP16.76■□□□□ 0.27
PSMD13-206ENST00000527047 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
PSMD13-206ENST00000527047 ADGRL3Q9HAR2 1447 aa16.76■□□□□ 0.27
PSMD13-206ENST00000527047 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
PSMD13-206ENST00000527047 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
PSMD13-206ENST00000527047 QRICH2Q9H0J4 1663 aa16.72■□□□□ 0.27
PSMD13-206ENST00000527047 DCCP43146 1447 aa16.72■□□□□ 0.27
PSMD13-206ENST00000527047 PLCD3Q8N3E9 789 aa16.72■□□□□ 0.27
PSMD13-206ENST00000527047 PHF12Q96QT6 1004 aa16.71■□□□□ 0.27
PSMD13-206ENST00000527047 C19orf44Q9H6X5 657 aa16.71■□□□□ 0.27
PSMD13-206ENST00000527047 CDC42BPGQ6DT37 1551 aa16.71■□□□□ 0.27
PSMD13-206ENST00000527047 CENPJQ9HC77 1338 aaPredicted RBP16.7■□□□□ 0.26
PSMD13-206ENST00000527047 MSH6P52701 1360 aa16.7■□□□□ 0.26
PSMD13-206ENST00000527047 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
PSMD13-206ENST00000527047 USP47Q96K76 1375 aa16.7■□□□□ 0.26
PSMD13-206ENST00000527047 POGKQ9P215 609 aa16.7■□□□□ 0.26
PSMD13-206ENST00000527047 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
PSMD13-206ENST00000527047 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
PSMD13-206ENST00000527047 ZEB1P37275 1124 aaPredicted RBP16.68■□□□□ 0.26
PSMD13-206ENST00000527047 SAFB2Q14151 953 aaKnown RBP eCLIP16.68■□□□□ 0.26
PSMD13-206ENST00000527047 C14orf37Q86TY3 774 aa16.67■□□□□ 0.26
PSMD13-206ENST00000527047 FMN2Q9NZ56 1722 aa16.67■□□□□ 0.26
PSMD13-206ENST00000527047 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
PSMD13-206ENST00000527047 POTEIP0CG38 1075 aa16.66■□□□□ 0.26
PSMD13-206ENST00000527047 TSPYL2Q9H2G4 693 aaPredicted RBP16.66■□□□□ 0.26
PSMD13-206ENST00000527047 MINK1Q8N4C8 1332 aaPredicted RBP16.66■□□□□ 0.26
PSMD13-206ENST00000527047 CADPS2Q86UW7 1296 aa16.65■□□□□ 0.26
PSMD13-206ENST00000527047 TESK2Q96S53 571 aa16.65■□□□□ 0.26
PSMD13-206ENST00000527047 MST1RQ04912 1400 aa16.64■□□□□ 0.25
PSMD13-206ENST00000527047 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
PSMD13-206ENST00000527047 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
PSMD13-206ENST00000527047 GALR2O43603 387 aaPredicted RBP16.63■□□□□ 0.25
PSMD13-206ENST00000527047 ATF3P18847 181 aa16.63■□□□□ 0.25
PSMD13-206ENST00000527047 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
PSMD13-206ENST00000527047 USP32Q8NFA0 1604 aa16.63■□□□□ 0.25
PSMD13-206ENST00000527047 RGPD8O14715 1765 aaPredicted RBP16.62■□□□□ 0.25
PSMD13-206ENST00000527047 WASLO00401 505 aaPredicted RBP16.62■□□□□ 0.25
PSMD13-206ENST00000527047 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.256e-6■■■■□ 25.1
PSMD13-206ENST00000527047 TOM1O60784 492 aa16.6■□□□□ 0.25
PSMD13-206ENST00000527047 CLCN6P51797 869 aa16.6■□□□□ 0.25
PSMD13-206ENST00000527047 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms