RNA–Protein interactions for RNA: ENST00000525530.1

PPFIA1-203, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-203ENST00000525530 CCDC102AQ96A19 550 aa11.28□□□□□ -0.6
PPFIA1-203ENST00000525530 KDM4AO75164 1064 aa11.27□□□□□ -0.61
PPFIA1-203ENST00000525530 AVPP01185 164 aa11.27□□□□□ -0.61
PPFIA1-203ENST00000525530 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
PPFIA1-203ENST00000525530 GRIPAP1Q4V328 841 aa11.26□□□□□ -0.61
PPFIA1-203ENST00000525530 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
PPFIA1-203ENST00000525530 DXOO77932 396 aaKnown RBP11.25□□□□□ -0.61
PPFIA1-203ENST00000525530 DACH1Q9UI36 760 aa11.25□□□□□ -0.61
PPFIA1-203ENST00000525530 HOXA2O43364 376 aa11.24□□□□□ -0.61
PPFIA1-203ENST00000525530 Q3C1V9 767 aa11.23□□□□□ -0.61
PPFIA1-203ENST00000525530 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
PPFIA1-203ENST00000525530 FAM217BQ9NTX9 383 aaPredicted RBP11.23□□□□□ -0.61
PPFIA1-203ENST00000525530 USB1Q9BQ65 265 aaKnown RBP11.22□□□□□ -0.61
PPFIA1-203ENST00000525530 USP46P62068 366 aa11.21□□□□□ -0.61
PPFIA1-203ENST00000525530 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
PPFIA1-203ENST00000525530 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.21□□□□□ -0.61
PPFIA1-203ENST00000525530 WNT7AO00755 349 aa11.2□□□□□ -0.62
PPFIA1-203ENST00000525530 TRIM32Q13049 653 aa11.2□□□□□ -0.62
PPFIA1-203ENST00000525530 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
PPFIA1-203ENST00000525530 CYP4X1Q8N118 509 aa11.19□□□□□ -0.62
PPFIA1-203ENST00000525530 GPCPD1Q9NPB8 672 aa11.19□□□□□ -0.62
PPFIA1-203ENST00000525530 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
PPFIA1-203ENST00000525530 SMPD1P17405 629 aa11.17□□□□□ -0.62
PPFIA1-203ENST00000525530 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
PPFIA1-203ENST00000525530 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
PPFIA1-203ENST00000525530 SKOR1P84550 965 aa11.16□□□□□ -0.62
PPFIA1-203ENST00000525530 TULP1O00294 542 aaPredicted RBP11.15□□□□□ -0.62
PPFIA1-203ENST00000525530 CLCN1P35523 988 aa11.15□□□□□ -0.62
PPFIA1-203ENST00000525530 MRGPRX2Q96LB1 330 aa11.15□□□□□ -0.62
PPFIA1-203ENST00000525530 PCDHGC3Q9UN70 934 aa11.14□□□□□ -0.63
PPFIA1-203ENST00000525530 CTC1Q2NKJ3 1217 aa11.13□□□□□ -0.63
PPFIA1-203ENST00000525530 BCANQ96GW7 911 aa11.13□□□□□ -0.63
PPFIA1-203ENST00000525530 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
PPFIA1-203ENST00000525530 J3QL48 77 aa11.12□□□□□ -0.63
PPFIA1-203ENST00000525530 AXIN1O15169 862 aa11.12□□□□□ -0.63
PPFIA1-203ENST00000525530 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
PPFIA1-203ENST00000525530 JUNDP17535 347 aa11.11□□□□□ -0.63
PPFIA1-203ENST00000525530 TTC24A2A3L6 582 aaPredicted RBP11.1□□□□□ -0.63
PPFIA1-203ENST00000525530 PTCRAQ6ISU1 281 aaPredicted RBP11.1□□□□□ -0.63
PPFIA1-203ENST00000525530 BARGINQ6ZT62 677 aa11.09□□□□□ -0.63
PPFIA1-203ENST00000525530 ZMYND10O75800 440 aa11.08□□□□□ -0.64
PPFIA1-203ENST00000525530 TREML4Q6UXN2 200 aa11.08□□□□□ -0.64
PPFIA1-203ENST00000525530 RETREG3Q86VR2 466 aa11.08□□□□□ -0.64
PPFIA1-203ENST00000525530 SSTR3P32745 418 aaPredicted RBP11.07□□□□□ -0.64
PPFIA1-203ENST00000525530 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
PPFIA1-203ENST00000525530 CCDC24Q8N4L8 307 aa11.07□□□□□ -0.64
PPFIA1-203ENST00000525530 SPIRE2Q8WWL2 714 aa11.07□□□□□ -0.64
PPFIA1-203ENST00000525530 HPS1Q92902 700 aa11.07□□□□□ -0.64
PPFIA1-203ENST00000525530 WNT7BP56706 349 aa11.06□□□□□ -0.64
PPFIA1-203ENST00000525530 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
PPFIA1-203ENST00000525530 FDX1P10109 184 aa11.05□□□□□ -0.64
PPFIA1-203ENST00000525530 AMHR2Q16671 573 aa11.05□□□□□ -0.64
PPFIA1-203ENST00000525530 ZC3H15Q8WU90 426 aaKnown RBP11.04□□□□□ -0.64
PPFIA1-203ENST00000525530 SIAH2O43255 324 aa11.03□□□□□ -0.64
PPFIA1-203ENST00000525530 NDUFV2P19404 249 aa11.03□□□□□ -0.64
PPFIA1-203ENST00000525530 NUDT12Q9BQG2 462 aa11.03□□□□□ -0.64
PPFIA1-203ENST00000525530 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
PPFIA1-203ENST00000525530 MOXD2PA6NHM9 499 aa11.02□□□□□ -0.65
PPFIA1-203ENST00000525530 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
PPFIA1-203ENST00000525530 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
PPFIA1-203ENST00000525530 NFX1Q12986 1120 aaKnown RBP11□□□□□ -0.65
PPFIA1-203ENST00000525530 SNRPBP14678 240 aaKnown RBP10.99□□□□□ -0.65
PPFIA1-203ENST00000525530 GIGYF2Q6Y7W6 1299 aaKnown RBP10.99□□□□□ -0.65
PPFIA1-203ENST00000525530 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
PPFIA1-203ENST00000525530 C6orf229H3BNL8 230 aa10.98□□□□□ -0.65
PPFIA1-203ENST00000525530 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
PPFIA1-203ENST00000525530 SH3BP2P78314 561 aa10.97□□□□□ -0.65
PPFIA1-203ENST00000525530 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
PPFIA1-203ENST00000525530 MS4A1P11836 297 aa10.96□□□□□ -0.65
PPFIA1-203ENST00000525530 PTPRNQ16849 979 aa10.96□□□□□ -0.65
PPFIA1-203ENST00000525530 EVA1BQ9NVM1 165 aa10.96□□□□□ -0.65
PPFIA1-203ENST00000525530 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
PPFIA1-203ENST00000525530 NISCHQ9Y2I1 1504 aa10.94□□□□□ -0.66
PPFIA1-203ENST00000525530 ALDH1A1P00352 501 aa10.94□□□□□ -0.66
PPFIA1-203ENST00000525530 PARP9Q8IXQ6 854 aa10.94□□□□□ -0.66
PPFIA1-203ENST00000525530 PRR7Q8TB68 274 aa10.94□□□□□ -0.66
PPFIA1-203ENST00000525530 WFS1O76024 890 aa10.93□□□□□ -0.66
PPFIA1-203ENST00000525530 BEGAINQ9BUH8 593 aa10.93□□□□□ -0.66
PPFIA1-203ENST00000525530 UNC93B1Q9H1C4 597 aa10.93□□□□□ -0.66
PPFIA1-203ENST00000525530 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
PPFIA1-203ENST00000525530 GJA5P36382 358 aa10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 KCNH2Q12809 1159 aa10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 MTMR2Q13614 643 aa10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 RSBN1LQ6PCB5 846 aaPredicted RBP10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 EHBP1Q8NDI1 1231 aa10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 TBC1D2Q9BYX2 928 aa10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 PCDHB15Q9Y5E8 787 aa10.91□□□□□ -0.66
PPFIA1-203ENST00000525530 TRIM66O15016 1216 aa10.9□□□□□ -0.66
PPFIA1-203ENST00000525530 TRIM46Q7Z4K8 759 aa10.9□□□□□ -0.66
PPFIA1-203ENST00000525530 BAP1Q92560 729 aa10.9□□□□□ -0.66
PPFIA1-203ENST00000525530 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
PPFIA1-203ENST00000525530 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
PPFIA1-203ENST00000525530 CFAP99D6REC4 459 aa10.88□□□□□ -0.67
PPFIA1-203ENST00000525530 WIPF1O43516 503 aa10.88□□□□□ -0.67
PPFIA1-203ENST00000525530 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
PPFIA1-203ENST00000525530 TERTO14746 1132 aaKnown RBP10.87□□□□□ -0.67
PPFIA1-203ENST00000525530 SPTLC1O15269 473 aa10.87□□□□□ -0.67
PPFIA1-203ENST00000525530 ZNF511Q8NB15 262 aa10.87□□□□□ -0.67
PPFIA1-203ENST00000525530 BMP1P13497 986 aa10.86□□□□□ -0.67
PPFIA1-203ENST00000525530 LYPD8Q6UX82 237 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms